Cygnus atratus (black swan): 118257069
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Entry
118257069 CDS
T09349
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118257069
04020 Calcium signaling pathway
118257069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118257069
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118257069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118257069
NCBI-ProteinID:
XP_050570451
LinkDB
All DBs
Position
19:complement(9582315..9864574)
Genome browser
AA seq
2357 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGDEVGDFPCGEEPPARQCEIGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIQQGTAP
AETSSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYF
RRKEKMFRFFIRRMVKAQSFYWIVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGL
FLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTT
NFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKS
KSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRGE
GRNNISKLSPGDVQEVEQSKVSSADGAEAPRKHHRHRDKDKLGEQEKCDVTKEENGESGT
NSKEERHRQHRSRSKEVEGCSKEGKSDRTRGQEGGKRHHRRGSVEEGAEKEHRRHRTHRH
SAERQGKEGNGTINGARGERRSRHRGGSRSGNREGEPCSKGENGEEPHRRHRFRNRALST
YDSVEKENGEKEGEAGEKEHRNHQPKENQCEIEASGSVSVPVHTLPSTYLQKVPEQPEDA
DNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMNNVEFESKTEEKKDVDDLTKNG
PKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRN
DALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTK
GKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIA
VQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEFHYDNVLWALLTLFT
VSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQ
EQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVM
IALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDF
VTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALP
YVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALMLLFRSATGEAWHEI
MLSCLSSRACDPLSGLTKNECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDS
SILGPHHLDEFVRVWAEYDPAACCRIHYKDMYNLLRVIAPPLGLGKKCPHRVAYKRLVRM
NMPISPEDLTVHFTSTLMALIRTALEIKLATGGVKQHQCDAELRKEISLVWPNLSQKTLD
LLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVHQPPGGLCQPGPVSLFHPLKATLE
QTQPAAFSNAKAFLRQKSSASLNNGGTLPPPEGGIKESSSWGTQRTQDMFYETRTPAFER
GHSEEIPIERVVEMREISPTLTNGEHQPGLESQGRAASMPRLAAETQRSKARSPGSYLAP
IPDTSPMKRSISTLTPQRPHAMHLYEYSLERMPTDQVHHHHHHRCHRRKEKKQKSLDRSP
HQLADGEAVAQSGESSSKDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSRDRSQPKSA
DQSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSITYKT
ANSSPVHFTTSPGSLPPFSPGRLSRGLSEHNALLRGDQQPPPAAVARIGSDPYLGHRDAA
DSPCGAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQARRVPNGYHYTLGLNTGPGT
GARGRSYYHEADEDDWC
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggggatgatctgccaacacgctatggaggtggagggccagccggggct
ggaagagggagcagccggcaaggtggcccccaggccggccaaaggatgtataagcagtcg
atggctcagagagccaggactatggctctctacaatcccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagaatggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacacctatgtcagag
agattggatgacactgagccgtactttattggaatattttgttttgaagctggtataaag
atcatcgctctggggtttgtttttcacaaaggctcttatctccgaaatggctggaacgtg
atggattttgttgtggtcctcacagggattctggcaaccgctgggactgactttgacctg
cggaccctgcgagctgtccgagtgctgcggcccctgaagctggtgtcaggaatcccaagt
ttgcaggttgtcctcaagtccatcatgaaggcgatggtgcccctgcttcagatcgggctg
ctcctcttcttcgccatcgtgatgtttgccatcatcgggctggagttctacatggggaag
tttcacaaaacctgcttctccaacgagacaggcgacgaggtgggagattttccttgcgga
gaggagccccctgccaggcagtgcgagattgggaccacctgcagggagtactggcaaggg
cccaactacggcatcaccaacttcgacaacatcctcttcgctgtgctcaccgtcttccag
tgcatcaccatggaggggtggaccgacatcctctacaacacaaatgatgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcctgtcaggtgaatttgccaaagaacgagagagggtagaaaatcgc
cgagctttcctgaaactccgtaggcagcagcaaatagaacgggagctaaatggatacctg
gagtggatcttcaaagcagaggaggtcatgctggctgaggaagacaagaatgcggaagag
aaatctcctctggacgggagggccgcctcggaagggccgattcaacaaggcacggcaccg
gcagagactagcagcggcagcagctacaacatgttgaaaagagctgcaataaagaagagc
aaaaatgacctgattcatgctgaagaaggtgaggaccatttcacagacatttgctccgtt
gggtctccttttgcccgtgccagtttgaagagtgggaagaacgagagctcgtcctacttc
cggaggaaagagaaaatgtttcggttcttcatccggcgcatggtgaaagctcagagcttc
tactggatcgtgctctgcgtggtcgccctcaacacgctctgcgtggcaatggtgcactac
gaccagccggagaagctcaccactgcgctgtatttcgcagagtttgtttttctgggtctg
ttccttactgagatgtctttgaagatgtatggactggggccaagaaattacttccactct
tcattcaactgctttgactttggggtcatcgtgggaagtatctttgaagttatttgggct
gcggtgaagcctggtacctcatttggcatcagcgtactgagagctcttcgactgctgagg
attttcaaagtcacaaaatactggaattccctgaggaatctcgtggtctccttgctgaac
tccatgaagtccatcatcagtttgctctttctgctgttcctcttcatcgtggtgtttgct
ctgctggggatgcagctctttggaggacaattcaattttcaagacgaaacaccaaccaca
aattttgataccttcccagccgccatcctcacagtattccagatcctgacgggggaagac
tggaacgcggtgatgtaccacggcatagagtcgcagggtggtgtccactcggggatgttc
tcctccatttacttcatcgtcctgacgttgtttggtaactatacgctcctgaacgtcttc
ttggctatcgccgtggacaatctggcaaatgcccaagagctgaccaaggacgaggaggag
atggaggaagccaccaaccaaaagctcgctctgcagaaggccaaggaagtagcagaagtc
agccccatgtcggcagctaacatttccatagccgccaagcagcagaactcctccaaatcc
aagtcagtttgggagcagaggaccagccagatccggatgcacaatttccgagccagctgc
gaggcgctgtacaacgagctggatcccgaggagcgggtgcgttacgccaccaccctccac
atccgtcccgacatgaagacgcatttggaccggcctctggtggtggagccgaggggcgaa
gggaggaacaacatcagcaagctgagccctggagacgtgcaggaggtggagcagagcaag
gtcagctctgccgatggagcagaagctccacgaaagcatcaccggcatcgggataaggac
aaactgggagagcaagagaagtgcgatgtgaccaaggaggagaacggggagtctggcacc
aacagtaaggaggagcggcaccggcagcacaggagccgcagcaaggaggtggaagggtgc
agcaaggaagggaaaagtgaccgcaccaggggccaggaagggggaaagaggcaccaccgc
cgagggtcggtggaggaaggtgccgagaaggagcaccgtaggcatcggactcaccggcac
tctgctgaaaggcagggcaaggaaggcaacgggacgatcaacggggcccggggcgagcgg
cgttcccgacaccggggagggtcgaggtctgggaaccgggaaggagagccctgttccaag
ggcgagaacggagaagagcctcacagacggcacaggttcaggaacagggcgctgtcgacg
tacgattcagtggagaaggagaatggggagaaggagggggaggctggagagaaggagcac
cggaatcatcagcccaaggagaatcagtgtgagatcgaggctagtggaagcgtgagcgtc
cccgtgcacacccttcccagcacctacctgcagaaagtgcctgagcagccagaagatgcc
gacaaccagaagaatgtgacacgcatgattcagccacctctggacaaaaccaccactgtg
aacatccccgtgaccatcactgccccgccgggagaaaccactgtcataccaatgaacaac
gttgagtttgaaagtaaaacagaggagaagaaggatgttgatgacttgacaaaaaacggg
cctaaaccaatcttgccttacagttcaatgttcatcctaagtcctacaaacccgattcgg
cgtctgttccactacattgtcaacctgcgctacttcgagatggtcatcctcatagtgata
gccctcagcagcattgccctggctgcagaagaccctgtccaagccgagtcaccgaggaac
gatgctctgaaatacttggattatatatttacgggtgtctttaccttcgagatggtgatc
aagatgattgacttggggctgttactgcaccctggctcctacttccgtgacctgtggaat
atcctggacttcattgtggtcagtggggccttggtggcatttgccttctcaggaaccaaa
ggcaaggacatcaacacgatcaagtcgctgcgagttctgcgggtcctaagaccactgaag
accattaaacggctgccaaaactgaaggccgtctttgactgtgtggtgaattccctgaag
aatgtcctcaacatcctcatagtctacatgctcttcatgttcatttttgccgtcatcgct
gtgcagctcttcaaaggcagattcttctactgcactgatgagtcgaaggagctcgagaag
gactgcaggggtcagtaccttgactatgaaaaaaatgaggtggaggcacagcccagggaa
tggaaaaaatacgagttccactacgacaacgtgctgtgggctctgctgacgctcttcacc
gtctccacgggagaagggtggccaactgtattgaagcattcagtggatgctacctacgag
gaacagggtcccagccctggctaccgaatggaaatgtctatcttttacgtggtgtatttt
gttgtcttcccttttttctttgtgaacatctttgtggcgttaatcatcatcaccttccaa
gagcaaggagataaagtgatgtcagaatgcagcctagagaaaaacgagagggcctgcata
gacttcgctataagtgccaagccactgacccgctacatgcctcagaacaagcaatctttt
cagtacaagatgtggaaatttgtggtgtcccctccctttgagtactttatcatggtcatg
attgcactcaatactattgttctcatgatgaagttctatgatgctccagaagcgtatgaa
gaaatgttgaaatgcctgaatattgtgtttacgtccatgttttcaatggaatgtgtgctg
aagatcattgcctttggtgtgctgaattatttccgagatgcctggaatgtctttgatttt
gtaacagtgttgggaagtattactgatattttagtaacagagattgcggacacggacaac
ttcatcaacctcagcttcctgcggctcttcagggcagccagacttatcaagctcctccgc
cagggttacactatccgcatcttgctctggacatttgtgcagtcctttaaggccttgcct
tatgtgtgtcttctcattgcaatgctcttcttcatctatgccattattggcatgcaggta
tttggaaacattgcgctggatgacgagacctccatcaatcggcacaataatttccgtacc
ttcctgcaagccttgatgcttctgttcaggagcgccacgggggaggcctggcacgagatc
atgctgtcgtgcctgagcagccgggcctgcgaccccctctccggcctcaccaagaacgag
tgcggcagcgactttgcctatttctactttgtgtccttcatcttcctctgctccttcctg
atgttgaacctatttgtggctgtgattatggacaactttgaataccttacgagagactcc
tccatccttgggccccatcatttggatgagtttgttcgtgtctgggctgaatatgaccca
gctgcctgttgccggattcattataaggatatgtacaatttgttacgtgtaattgctcca
cccctgggcttaggaaagaagtgccctcatagggtggcatacaagcgcctggtgcggatg
aacatgcccatctcgcccgaggacctgacagtccacttcacgtccacgctgatggccctg
atccgcaccgccctcgaaatcaaactcgccacagggggtgtcaagcagcaccagtgtgat
gctgagctgagaaaggagatctcgctggtttggcccaatctgtcccagaagacgctggac
ttgctggtgcctccccacaaacccgatgagatgaccgtggggaaggtctacgcagcactc
atgatattcgacttctacaaacagaacaagaacagcagggaacaagtccaccagcctcct
gggggcctgtgccagcccggcccggtgtcgctcttccaccccctgaaggccaccctggag
caaacccagcccgcagcgttcagcaacgcgaaggcgttcctccgccagaaaagctcggca
tcgctcaacaacgggggcacgctgccacccccagagggtgggatcaaagagtccagctcc
tgggggacccagcgcacccaggacatgttttatgaaaccaggacaccagcttttgaacga
ggccactcagaagaaatccctattgagcgggtggtggaaatgagggaaatcagccccact
ctcaccaatggagagcaccagccgggtctggagagccaggggcgggcggcttccatgccg
cgcctggctgccgaaactcagaggagcaaagcacggtcacctgggagttacctagcaccc
atcccggacacgagccccatgaagcggtccatctccacgctgaccccgcagcgcccgcac
gccatgcacctctacgagtactccctggagcgcatgccgaccgaccaggtgcaccaccac
caccaccaccgctgccaccggcggaaagagaagaagcagaagtccttggacaggtcccca
catcagctggccgacggggaagccgtggcccagtctggcgagtcttcttccaaggacaag
aagcaggagcgcggccggtcccaggagaggaagcagcactcctcctcctcctccgaaaag
cagcgcttctactcctgcgaccgctacggcagccgggaccgctcccagcccaagtctgct
gatcagagcaggcccacctcgcccaacggggggccggagcaaggcccgcacagacagggc
agtggttcggttaacgggagccccttgctgtcgacatctggtgctagtaccccctgccgg
ggtcggaggcagctcccgcagacccccctgaccccacgccccagcatcacttacaagacc
gccaactcctcgcccgtccacttcaccacctccccgggcagcctgccccctttctccccg
ggacgcctgagccgcggtctgtccgagcacaacgcgctgctgcgcggggaccagcagccg
cccccggccgcggtggcccgcatcggctccgacccctacctgggccaccgtgatgccgcc
gacagcccctgcggtgcggcgcccgaggacacgctcaccttcgaggaggcggtggccacc
aactcggggcgttcctccaggacttcttacgtctcctccttgacctcccagtctcaccaa
gcccgccgggtgcccaacggctaccactacacgctggggctcaacacgggccccggcact
ggcgcccggggacggagctactaccacgaagccgacgaggacgactggtgctag
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