Cygnus atratus (black swan): 118257154
Help
Entry
118257154 CDS
T09349
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118257154 (PRDM1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118257154 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
CapR
Motif
Other DBs
NCBI-GeneID:
118257154
NCBI-ProteinID:
XP_035420715
LinkDB
All DBs
Position
3:47241797..47343832
Genome browser
AA seq
822 aa
AA seq
DB search
MRIKGCFLIFQAATQCSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPWDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPSSRELTMMNLTQTHVNPKQHSADKDELYQKSI
PKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYVTHSPIQSSTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHRESYSYLNGSYGSEGLGSYPGYAPPSHLPSAFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLNPATLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDL
NRINEEIEKFDISDNADKLEEVEDNIDLTSVVEKDILTMLRREMEGANLKVSLQRNLGNG
LISSGCNLYESSDMSIMKLPHGHPLPLLPVKVKQETVEPMDP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttcttattttccaggctgctacacagtgtagctcggacgct
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacggaagccgattttgaagagaagtgcacatacattgtaaac
gaccacccatgggatcccagcgccgacggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatatgcatcgaactgcaaagaggtcactggagttataagc
aaagagtacatcccaaaaggaacgcgctttggacccctggtaggagagatctataccagc
gatacggttcccaagaatgcgaacagaaaatacttttggcggatctattcaagtggtgag
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaac
cccggctactccgttcaggaacagaacttggcagcctgtcagaatggaatgaacatctac
ttctacactatcaagcccatccctgccaaccaagagttgcttgtgtggtattgccgagac
tttgcagagaggctgcactatccctcctccagagagctgacaatgatgaacctcacacaa
acacacgttaatccaaagcagcacagtgctgataaagatgagctctatcagaaaagcatc
ccaaagaaggagcacagcgtgaaagaaatcctgaaaatggaatccaatcctccaaaggga
aaagacttcttccagaccaacatttcaccagttactccagaaaaagacttggatgacttg
cgtaagaactatagcccagagaggtgtttcttccctcgagttgtctacccaatccgacct
cacattccagaagactatctgaaagcttccttagcgtatgggatggacagacccagctac
gttactcactcgcccatccagtcatctactacaccaagtccttctgggaggagcagccca
gaccaaagtttaaaaagttcaagccctcacagcagtccaggggtcacagtctcacctctg
gcacctacatcccaggagcacagagagtcgtactcttacttgaacggatcctatggctca
gagggattggggtcttatcctggatatgcaccccccagccatctcccgtctgcctttcta
ccgtcctataacccccactaccccaaatttctgttacctccattcaatatgagctgtaat
aacctgagcgctttgaacaatatcaatggcatcaacaatttcaatctcttcccgcggatg
tatcctctctatggcaacctactcagcggaggtagcctttcccaccacatgttgaacccc
gccacgctccccagttcactgcccagcgaaggaggccgtcgtttgctgcagcctgatcat
ccaagagacttcctcataccagcacctaacagtgccttctctatcacaggcgctgctgcc
agcatgaaggacaagccgtgcagccccaccagcgggtcacccacagctggtacagcagcc
agttcagaacacataatgcaacctaaacctacctcagtggtgttggccgccaccggcggt
gaagaagccatgaatctcattaaaagtaagaggaatgtgactggttacaaaaccctccca
tacccactgaagaagcagaacgggaagatcaagtacgaatgcaacgtttgctccaagacc
tttggccagctctccaatctgaaggtgcacctccgagtacacagcggagagagaccattt
aaatgccagacctgcaataagggcttcacccagctggctcacctccagaagcactatctg
gtacacacaggagaaaaaccccacgagtgtcaggtttgtcacaagcggttcagcagcacc
agcaatctcaaaacccacctgcggctccactctggagagaagccttaccagtgcaagctg
tgcccagccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgg
gaacgtccccataaatgcatccactgccacaagagctacattcacctctgcagcctccag
gtccatctgaagggcaactgcccggttgcccctgcctctggcctctcgatggaggacctg
aatcgaatcaatgaggagatcgagaagttcgacatcagtgacaatgccgacaagttggaa
gaagtggaggacaatattgacctaacatcggttgtggagaaggatatactgaccatgctc
agaagggaaatggaaggagctaatctcaaagtatctttacagaggaacctgggaaatgga
cttatctcctcaggatgcaacctttacgagtcttcagatatgtcaattatgaagttgcct
cacggtcacccactacctctgttacctgtaaaggtcaagcaagaaacagttgaaccaatg
gatccttaa
DBGET
integrated database retrieval system
