Cygnus atratus (black swan): 118257192
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Entry
118257192 CDS
T09349
Symbol
GPC6
Name
(RefSeq) glypican-6
KO
K08112
glypican 6
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cata00535
]
118257192 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cata00537
]
118257192 (GPC6)
Proteoglycans [BR:
cata00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
118257192 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cata00537
]
Others
118257192 (GPC6)
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Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
PAF-AH_p_II
Motif
Other DBs
NCBI-GeneID:
118257192
NCBI-ProteinID:
XP_050568801
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Position
1:complement(154645252..155450361)
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AA seq
619 aa
AA seq
DB search
MSVCARPPSLRLPKVCLGGRGAPGPPPPQPGGAAAARWLRGDSAGLARCAGLARRAMPAA
RGAARCALAGLLLLPLLLLLPPAAAGADGKARSCGEVRQAYSAKGFSLASVPYQEIAGEH
LRICPQEYTCCTSEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENA
ERSLNDMFVRTYGTLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLI
NPQYHFTEDYLECVSKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQGLTVGREVANRVS
KVSPTPGCIRALMKMLYCPYCRGLPTVKPCNNYCLNVMKGCLANQADLDTEWNLFIDAML
LVAERLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSSRSV
PENFNTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKFWSTFPYTICKNERVTAGS
LNEEDCWNGHTKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVMTNKLKN
AYNGNDVNFQDTSDETSGSGSGSGCTDDICPTEFDFITTEAPPVDSDRREVEASATQPGR
SLQMLLIVFISLVLQRQWR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtgtgcgcgaccaccttccctccgcctcccaaaagtttgcctcggcggccgg
ggggctcccgggccgccgccccctcagccggggggcgcggcggcggcgcggtggctgcgc
ggcgacagcgcgggacttgcgcgctgcgcgggacttgcgcgccgcgccatgccggcggcg
cggggggctgcgcgctgcgccctggcggggctgctcttgctcccgctgctgctgctgctg
ccgcccgcggccgcgggggccgacggcaaagcgcggagctgcggcgaggtgcggcaggcg
tacagcgccaagggcttcagcctggccagcgtgccctaccaggagatcgcaggggaacat
ttgagaatctgccctcaggaatatacatgctgcacatcagaaatggaggacaagttaagc
cagcagagcaaactggagtttgaaaacttggtggaggagacaagtcactttgtacgcacc
acttttgtgtcccggcacaagaagtttgatgaatttttccgagaacttcttgagaatgca
gaaagatccttaaatgacatgtttgtccggacatatggcacgctgtacatgcagaactcg
gaggttttccaggatctcttcacagaactgaagcggtattacacgggagggaacgtgaac
ttggaggaaatgctgaatgatttctgggctcggctgctggagcggatgttccagcttata
aacccccagtatcatttcactgaggactacttggagtgtgtaagcaagtatacagaccag
ctgaaaccatttggagatgtaccccggaagctgaaggttcaagtgactagagcgttcatt
gctgcacggacctttgttcaggggctgacagtaggcagagaggttgcaaacagagtatcc
aaggtcagtcccaccccagggtgcatccgggcgttaatgaagatgttgtactgcccttac
tgcagaggacttcccactgtgaaaccttgcaacaactattgcctcaatgtaatgaagggc
tgcctagcaaatcaggctgatttggatactgagtggaatctgttcatagatgctatgctt
ctggtagcggagagattagagggaccattcaacattgaatcagtcatggatcctattgat
gtcaagatttctgaagccatcatgaacatgcaagaaaacagcatgcaggtgtcggcaaag
gttttccaaggatgtggccagcctaaaccagcacctgccctaagatcttcccgttctgtc
cctgaaaacttcaatacccggtttagaccatataacccggaggagcgacctacaactgct
gctggcacaagtttggataggctggtaacagacattaaagaaaaactaaagctctctaaa
aagttctggtcaacattcccctacacaatctgcaagaacgaacgagtgacagccggttcg
ttaaatgaggaggactgctggaacggccataccaaggcaagatacttgcctgaaattatg
aatgatggcttgaccaaccaaatcaacaatccagaagtagatgtggacatcacaaggcca
gacaccttcattcgacaacaaatcatggctttacgtgtcatgactaacaaactgaagaat
gcgtataatggaaatgatgtcaacttccaggatacaagtgatgagaccagcggctccggc
agtggaagcggctgtacggacgacatctgtcccaccgagttcgatttcatcacaaccgaa
gcaccgcctgttgactccgacagaagggaggtggaggcttcagccacgcagcctggccgg
tcactgcagatgttgcttatcgtcttcatcagcctcgtactgcagagacaatggagataa
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