Cygnus atratus (black swan): 118257300
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Entry
118257300 CDS
T09349
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04514
Cell adhesion molecules
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118257300 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118257300 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cata00535
]
118257300 (SDC3)
Proteoglycans [BR:
cata00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118257300 (SDC3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
118257300
NCBI-ProteinID:
XP_050571215
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Position
23:complement(5701299..5732625)
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AA seq
434 aa
AA seq
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MPAELPPPPPRGPRSLAVPLLLLLLLGGGARPAAAQRWRNENYERPVDLEGSGDDDPFGD
DELDDVYSGSGSGYFEQESGLETAVSLTTDTSITLPTTAAALPVTAVQPVATPFETSPTE
DTIPEQTTGASYIPRVTEAPVIPSWKATTTSTTASEAPSTTTTTTTTAATTTTTATTTTS
TTTVATAKPTTVRRFLPPFVTKAATTRATTLEMPTASILQTSTPTEVATSQLVPSSTAKP
RSLPKPSTSRTADLTEKSTALPSSPTTLPPTEAPQVEPGEVSTVLDSDLEVPVSSGPSGD
FEIREEEETARPELGNEVVAVVTPPSAPGQGRNAEPGLIDNTIESGSSAAQLPQKNILER
KEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFLR
VGQEPGITLLPASV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcggagctgccgccgccgccgccccgggggccgcggagcctcgcggtgccgctg
ctgctgctgctgctgctgggggggggcgcccgccccgcggcggctcagcgctggcgcaat
gagaactatgagaggccggtggacctggagggctccggggacgacgacccctttggggac
gacgaactggacgatgtctactcaggctctggctcaggctacttcgagcaggagtcgggg
ctggagacggccgtcagcctcaccacggacacgtccatcacgctccccaccacggcagct
gcgttgcccgtcactgcggtgcaacccgtggcaactccctttgaaacatcccccaccgag
gacaccatccccgagcagaccaccggcgcctcgtatatccccagggtgacagaggcacca
gtgatacccagctggaaggccaccaccaccagtaccacagccagcgaggcccccagcacg
accaccaccaccaccactacagctgccaccaccaccaccacggccaccaccaccaccagc
accaccaccgtggccactgccaagcccaccaccgtccggaggttcctgcccccctttgtc
accaaggcagcaaccacgcgggccaccaccctggagatgcccaccgcgtccatccttcaa
accagcacgccgacggaggtggccacgtcacagcttgtcccctccagcacggccaagcct
aggtccctgccaaaaccaagcacctccaggactgcagacctcacggaaaaaagcactgcc
ttgccttccagccccaccacgctgccacccacagaagccccccaggtggagccaggggag
gtgtcgacggtcctcgacagcgacctggaagtcccagtcagcagtggccccagcggggac
ttcgagatccgggaggaggaggagacagctcgtcccgagctgggcaacgaggtggtggcc
gtggtgacaccgccatcggcaccggggcagggcaggaacgcggagccggggctcatcgac
aacacgatagagtcgggcagctcggctgctcagctccctcagaagaacatcctggagagg
aaggaggtgttgatagcggtgattgtgggcggcgtggtgggagccctctttgctgccttc
ctcgtcatgctgctcatctaccggatgaagaaaaaggatgaaggcagctacacgctggag
gaacccaagcaagccaatgtcacctaccagaagccggacaagcaggaggagtttttacgc
gtaggacaagagcccggaattaccttgctccccgcttctgtttga
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