Cygnus atratus (black swan): 118257309
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Entry
118257309 CDS
T09349
Symbol
MATN1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118257309 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
118257309 (MATN1)
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Ortholog
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GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
vWA_SIBA-E
EGF_3
EGF
Plasmod_Pvs28
EGF_LRP2
hEGF
ASD2
Motif
Other DBs
NCBI-GeneID:
118257309
NCBI-ProteinID:
XP_035421017
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All DBs
Position
23:complement(5456757..5473893)
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AA seq
493 aa
AA seq
DB search
MDRIFSTVLLSLLLLLQSYGVWGAPPQPRGTLCRTKPTDLVFVIDSSRSVRPQEFEKVKV
FMSRVIEGLDVGPNSTRVGVINYASAVKNEFSLKTHQTKAGLLQAVQRIEPLSTGTMTGL
AIQFAISRAFSDSEGARLRSPNINKVAIVVTDGRPQDGVQDVSARARAAGIEIFAIGVGR
VDMHTLRQIASEPLDDHVDYVESYSVIEKLTHKFQEAFCVVSDLCATGDHDCEQICISTP
GSYKCACKEGFTLNNDGKTCSACSGGSGSALDLVFLIDGSKSVRPENFELVKKFINQIVE
SLEVSEKQAQVGLVQYSSSVRQEFPLGQFKNKKDIKAAVKKMDYMEKGTMTGQALKYLID
SSFSIANGARPGVPKVGIVFTDGRSQDYITDAAKKAKDLGFRMFAVGVGNAVEDELREIA
SEPVAEHYFYTADFRTISNIGKKLQMKICIEEDPCECKSIVKFQTKVEELINSLQRKLEA
VAKRIEALENKII
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggacaggattttctccaccgtgctgctctctttgctgcttctcctccagagctatgga
gtttggggggcacctccgcagcccagaggcaccctgtgtcgaaccaaacccaccgacttg
gtgttcgtcatcgacagctcccgaagcgtgcgcccacaggagttcgagaaagtcaaagtc
ttcatgtcccgggtgatcgagggtctggacgtgggccccaactccacacgggtgggtgtg
atcaattacgccagcgccgtcaagaacgagttctccctcaagacacaccaaaccaaagcc
gggctcctgcaggcggtccagaggatagagccgctctccactgggactatgactggcctg
gccatccagtttgccatcagccgggcttttagtgactcagaaggggccaggctgaggtct
cccaatattaataaggtggcgattgtcgtgaccgacggacgtccccaggatggagtgcag
gatgtgtcagcaagggccagagcagctggcatcgagatctttgccatcggggttggccgg
gtggacatgcacaccctgcggcaaattgctagcgagcccctggatgaccacgtggactat
gtggagagctacagtgttatagagaagctgacccacaagtttcaagaagctttctgtgtg
gtgtcagacctgtgtgccactggagaccacgactgtgagcagatctgtatcagcacccca
ggatcgtacaagtgcgcttgtaaagagggtttcacgctgaacaatgatgggaagacctgc
agcgcttgcagtggtgggtcaggatctgccctggatctcgttttcctgattgatggatcc
aagagtgtaaggcctgagaactttgagctggtgaagaaattcatcaaccagatcgtggag
tcactggaggtgtcagaaaaacaggcccaagttggcctggttcagtactccagttctgtc
aggcaggagtttcctctggggcagttcaagaacaagaaggacatcaaagcagcggtcaag
aaaatggactacatggagaaaggaacgatgactggccaggctctgaagtacctcattgac
agctccttttccattgccaatggcgcaaggcctggggtcccgaaggtgggcatagtgttc
accgatggacggtcacaagattacatcaccgatgctgctaagaaagccaaagatttagga
tttaggatgtttgctgtgggagttggtaacgcagtggaggatgagctgagggaaatcgct
tcagaaccagtagctgagcactacttctacacagctgacttcagaaccatcagcaacatc
gggaagaagctgcaaatgaaaatctgcattgaggaagatccatgtgaatgtaaatctatt
gtgaagttccagacaaaagtagaagaactcatcaattcattgcaaaggaaattggaagct
gtggcaaaaaggattgaagccctggagaacaagatcatctaa
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