Cygnus atratus (black swan): 118257478 Help Entry 118257478         CDS       T09349                                  Symbol CCDC88A Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism cata  Cygnus atratus (black swan) Brite KEGG Orthology (KO) [BR:cata00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cata03037]     118257478 (CCDC88A) Cilium and associated proteins [BR:cata03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    118257478 (CCDC88A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HOOK_N APG6_N HOOK GAS Motif Other DBs NCBI-GeneID:  118257478 NCBI-ProteinID:  XP_035421426 LinkDB All DBs Position 3:118329769..118413006 Genome browser AA seq 2039 aa AA seqDB search MENEIFTPLLEQFMSSPLVTWVKTFGPLAGRNGTNLEEYVALVDGVFLSEVMLQINPKSA NQRINKKVNNDTSLRIQNLSILVKQIKTYYQETLQQLIMMSLPNVLIIGRNPFSEPGTEE IKKLLLLLLGCAVQCQKKEEFIESIQCLDFDTRAAVAAHIQEVTHNQENVFDLQWMEVIV LTQEYVEPLLKNMALHLKRLIDERDKHSETIIELSEERDSLRFLPHASAAQSPCGSPGMK RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEAELKRLQQENMNLLSE ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQN AVGSVEDSSSKILKMEKENQRLNKKLEGLENEISQEKQSLQNSQNLSKDLMKEKTQLEKT LEALRENSERQIKLLEQENEHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSS KLNKIEFEKKQVRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEAL EQENSDLETENRKLKKTLDSLKNLSFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA QLQLENKELESEKEQLKKSLELMKASFKKSERLEVSYQGLDTENQRLQKALENSNKKIQQ LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL RQQAEIKDSTLEENNVKISNLEKENKSLFKEIVVYKESCIRLKELEKENKELVKRATIDK KTLVTLREDLVSEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDSRYKLLESKL ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSP PRSGEENQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNS NLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALEN ENECVLKDHEDLKSLYDSLLKDHEKLEHLHERQASEYESLIAKHGSLKSAHKNLEVEHKD LEDRYNQLLKQKVQLEELEKVLKIEQEKMLQQNEKHETVAVEYKKLRDENDRLAHTYSQL LRENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLREQYQQLDITSTKLNNQCELLSQLK GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI MDQYKFYEPSPPRRRGNWIALKMKKLIKSKKDANRERLKSVTLTPTRSESSEGFLQLPHQ DSQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQ SMVLAGGQWTGSSEHLEGPDDISAGKRRKELGAMAFSTTAINFAAVNSSTGFRSKQLLNN KDTTSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGVVNNQS RPQSHSSGEFSLLHEHEAWSSSSSSPIQYLKGHTRSSPVLQQRTPETLDSRGKQIKNGSP GSEVVTLQQFLEESNKSTSSEMKSASEENLLDEVMKSLSESAELTGKEKLRKQASAGCGI VRSLSVKNTVDFSDGRSIKPEQLVRPSFRKTEDAYFTSSPIKFTSGTQGKTKSVKEKMQA TVSQRQSRDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDIRQPVSVDPAPSTADRSV PATSSEYSAHQLSPNVLHCVAYRVGCVPQSDAANTVKPRNLGCNFDVPKTSRMERSNFHE KTLSTNVFNDKVSVSGNDSTRSFTVAHPFLSLNTELVSNISGLPPRSASKTDQANLSTFR SVLKSQEQPSANQKSDHSDLRSALTSEFAPTTCVNTSEAEPPLLVSEDNKTVWYEYGCV NT seq 6120 nt NT seq  +upstreamnt  +downstreamnt atggagaacgaaatattcacaccccttttggagcagttcatgtctagccctcttgtcacc tgggttaagacgtttggaccgttagctggaagaaatgggaccaacctggaggaatatgtg gcgctagtggatggcgtgttcctgagtgaagtcatgctgcaaattaatccaaaatctgct aatcagaggataaataaaaaagtcaacaacgatacatcactaaggattcagaatttgtct attttggtgaagcaaataaaaacttactatcaggagactttgcagcagttgatcatgatg tctttgccaaacgtgttaataattggcagaaatcctttttctgagccaggtactgaagaa ataaaaaaactgctgctgctgctacttgggtgtgcggttcagtgtcagaaaaaagaagaa ttcattgaaagtatccaatgtctggattttgacacgagagcagctgttgcagcccatatt caagaggtaactcataatcaagaaaatgtgtttgatctgcagtggatggaggtcattgta ttgacacaagaatatgttgaacctctcttgaaaaacatggcattacatttgaaaagactt atagatgaaagagataagcactcagagactatcatagaactctcagaagaacgggactct ctccgttttctacctcatgcatcagcagcacagtcaccttgtggatctcctggcatgaaa cgcaccgaaagcaggcagcacctgtcagtagagctagcagatgccaaagcgaagataaga aggcttagacaagagcttgaggaaaagactgagcagttgcttgactgtaaacaagaactt gaacagatggaagctgaactaaagagacttcagcaggagaacatgaatttactgtcagag gcccgttctgccagagtgtatagagatgaattagatgctcttcgtgagaaggcaattcga gtcgacaagcttgaaagtgaagtcagccggtataaagagaggctgcatgatattgaattc tacaaagctagagtggaggagctaaaggaagacaatcaagtgttgctagaaacaaagaca atgttggaagatcagctggaggggacacgagcccgttcagataaattacatgagttagaa aaagagaatctacaattaaaagctaaattacatgatatggagatggagcgtgatatggac agaaagaagattgaggaactcatggaggaaaatatgactctagaaatggctcagaaacaa agtatggatgaatcgttgcatctcggctgggaacttgaacagataaataggactactgaa ctttctgaagtgccacagaaatcacttggtcatgaagtaaatgaactgacatcaagcaga ttactgaagttggaaatggaaaaccaaagtttgctgaagacagtggaagaattacaaaat gcagtgggttctgtagaagacagtagttcaaagattctgaaaatggaaaaggaaaaccaa agacttaacaaaaagcttgaagggctagagaatgaaattagccaagagaaacaaagtctg cagaacagtcaaaatttgagtaaagatttgatgaaggaaaaaacacagcttgaaaagaca cttgaggcacttcgagaaaactcagagcgacaaattaagctattagaacaagaaaatgaa catttgaatcaaactgtagcttctctaagacaacgctcacaaatcagtgctgaagcgaga atgaaggaaatcgaaaaagaaaataaaattcttcatgagtctattaaagaaaccagtagt aagttaaataagattgagtttgagaaaaaacaagtgagaaaagaactggagcattataaa gagaaaggggagagagcagaagaactcgagaatgagctgcatcatctggagaaggaaaat gaattattacagaaaaaaattactaacttaaaaattacttgtgagaagatagaggcctta gaacaagaaaactcagacctggagacggaaaacagaaagctgaaaaagactttggatagc ctaaaaaatctctcttttcaattagaatccttggaaaaggaaaattcacaacttgatgaa gaaaacttagaattaagaagaacaattgaatctttgaagtgtacaagcattaaggtggca caactacaattagaaaataaggaactggagagtgaaaaggaacaacttaaaaaaagcctt gaactcatgaaagcctcatttaagaaaagtgaacgcttagaagtcagctaccaaggtcta gacacagaaaaccaaaggttacagaaagcccttgaaaacagcaataagaaaattcagcaa ctagaaagtgaattacaagatttagagtctgaaaatcagactctgcagaaaaacttagaa gagttgaaaatctctagtaagcgcctagagcaattggaaaaggagaataagttgttagaa caagagacttctcaactggaaaaagataagaaacagttagaaaaggaaaataaaagactt cgacaacaagcagaaattaaagatagtactttagaagaaaacaatgtaaaaattagcaat ctggaaaaggaaaataaatctctatttaaagaaatagttgtatataaggagtcatgcatt cgcctgaaagaactagaaaaggaaaataaagaacttgtgaaaagagctactattgataag aaaacccttgtcactttacgagaggacttggtgagtgaaaaattgaagacccaacaaatg aacaatgatctagaaaagcttgcccatgaacttgaaaaaataggcttaaacaaggagcgt ctcttgcatgatgaacagagtagtgatgacagtaggtacaagcttctggagtcaaaatta gaatccacacttaagaagtctcttgaaataaaagaagaaaaaattgctgctttggaggct cgtttagaagaatcaacaaatttaaaccagcaactccgtcaagagcttaaaacagtgaaa aagaactatgaagccctcaaacaaagacaagaagaggaaaggatggttcagaattctcct ccaagaagtggagaagaaaatcagtctgtcaataagtgggagaaagaaaatcaggaaact actagagaattactgaaagttaaagatagattaatagaagtggaaaggaataatgctaca ctgcaggcagagaaacaagcactgaaaacacaattaaagcagcttgaaacacagaatagt aatctgcaggctcagattcttgcacttcagagacagactgtttctctacaagaacaaaat acaactttacaaactcaaaatgccaagcttcaggttgaaaattccacccttaattctcaa agtacatctcttatgaatcagaatgctcaactgttgatccaacagtctgcactagaaaat gaaaatgaatgtgtgctcaaggatcatgaggatctgaaatccctgtacgattcacttctc aaagatcatgaaaaactggaacacctacatgaacgccaagcttctgagtatgaatcgctg attgctaaacatggaagtcttaaatctgcacacaaaaatctggaggtggagcataaggac ttagaagataggtacaatcagttgctgaaacagaaagtgcagttggaagagttggagaaa gtgctcaagatagaacaggagaaaatgcttcagcaaaatgaaaaacatgaaactgtagca gtagaatataagaaacttcgtgatgaaaatgataggcttgctcatacatacagtcaactc ttaagagagaatgaagttctgcaaactgatcataagaatctgaaaacattattgaacaat tctaaactagaacaaacgcgattagaagctgagttttctaaacttagagaacagtaccaa caactggatattacatctaccaaattaaataatcaatgtgagctgcttagccagcttaaa ggaaatctggaggaggaaaacagacatctactagatcaaattcagacattaatgctacaa aatagaacattacttgagcagaatatggaaagcaaggatctcttccatgtagagcaaagg cagtacattgacaagctaaatgaattaaggcgacagaaggagaaattggaagagaagata atggatcagtataaattttatgagccatctccaccaagaagaaggggtaactggatcgct ctgaagatgaagaagctgataaaatcgaagaaggatgctaatcgagaacgtttgaaatct gtgacccttacgcctacccgttcagaatccagtgaaggatttcttcagctgccccaccag gacagtcaagatagttcttcagtgggctcaaattctcttgaagatggccagaccctggga accaaaaagagtagtatggttgcactgaaaagactgccctttttgaggaacagaccgaag gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcag tccatggtcttagcaggaggacaatggacaggtagttctgagcatctcgagggtcctgat gatatatctgcgggtaaaaggagaaaagaattgggagctatggccttctctactacagct atcaactttgcagctgtcaactcttctacaggcttcagatccaagcagttgctaaataat aaagatactacatcctttgaagatgtaagtccacaaggtattagtgatgattctagtaca ggatcaagagttcatgcttccagaccagccagccttgatagtggcagaacatccactagc aatagcaataacaatgcttcactccatgaagtcaaagcaggtgtggttaacaatcaaagc aggccgcaaagtcacagcagtggagaatttagtctgctacatgaacacgaggcttggtct agcagcagcagcagtcctattcagtatttgaaaggtcatacaaggtctagtcctgtgctc cagcaaagaacacccgaaacactggatagtcgtggaaaacagatcaaaaacggttctcct ggaagtgaagttgttaccctgcagcagtttttagaagaaagcaacaaaagtacctcaagc gagatgaaatctgcaagtgaagagaatcttttagatgaagtaatgaaaagtttatctgag tctgctgagctgacaggaaaggaaaagctaagaaaacaggcatctgctggttgtggtatt gtgaggtcgttaagcgtaaaaaatacagttgatttctcagatggacgatccattaaacca gaacaacttgtaaggcccagcttccgtaaaactgaagatgcctactttactagctctcca ataaaatttacatcaggcactcaagggaagaccaaatcagttaaagaaaagatgcaagca actgtatcacagcgacaatcaagagattgcaatccttatgctaccttacctcgtgcaagc agcgtaatttctacagcagaaggaactactcgaaggacaagcattcatgattttttgtct aaggatattaggcaacctgtttcagttgatccagcgccatccaccgctgacagaagcgtt ccagcaacatctagtgagtactcagcacaccagttatcccctaacgttttgcactgtgtg gcttacagggtaggttgtgttccacaaagtgatgcagctaatacagttaaaccacgtaat ttaggatgtaactttgatgtgcctaagacttcaaggatggaaaggtcaaattttcatgag aaaactttaagcacaaatgtgtttaatgataaagtcagtgtatctggcaatgatagcaca agatcatttactgtggctcatccgtttttatcccttaacactgaattagttagtaatata agtggattgcctccaaggtctgcatcaaaaactgatcaggcgaacctgtcaacatttaga tctgtactgaaaagtcaagaacagccttcagctaatcagaaatctgatcatagtgaccta cggtcagctctaactagtgaatttgctcctaccacctgtgtaaacactagtgaggctgaa cccccgctgctcgtttctgaagataataaaactgtgtggtatgagtatggttgtgtctga

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