Cygnus atratus (black swan): 118257494
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Entry
118257494 CDS
T09349
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03272
Virion - Hepatitis viruses
cata03273
Virion - Lassa virus and SFTS virus
cata04140
Autophagy - animal
cata04142
Lysosome
cata04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118257494 (LAMP1)
03272 Virion - Hepatitis viruses
118257494 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118257494 (LAMP1)
04142 Lysosome
118257494 (LAMP1)
04140 Autophagy - animal
118257494 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118257494 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118257494 (LAMP1)
04090 CD molecules [BR:
cata04090
]
118257494 (LAMP1)
Membrane trafficking [BR:
cata04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
118257494 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
118257494 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
118257494 (LAMP1)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
118257494 (LAMP1)
CD molecules [BR:
cata04090
]
Proteins
118257494 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
118257494
NCBI-ProteinID:
XP_035421456
LinkDB
All DBs
Position
1:complement(145094201..145113160)
Genome browser
AA seq
416 aa
AA seq
DB search
MARGLLAAAALLGFLQVSSSFDVRDSSGKVCIIANLTAAFSVEYKSNGQKQFAHFFLPQN
ATTEPHSSCGEGNTSQPTLALSFGAGHLLRLNFSKTVDKYQVEKLIFTYNLSDATLFHNS
TEGKVMEASQKSVIQARMDTEYRCINSKHILMKHVNITFSNVTLEAFPTNGTFSRNKTEC
SEDMVSTTTVVPTTPKQTTSQVPTASPAPTASPPNPAVGKYNVTGTNGTCVLASMGLQLN
ITYPKKDEKMGLDLLNFIPHNTTASGKCDNASAFLNLTFEKTKIIFHFVLNASNDKFFLR
GVSVSTTLPSEAKAPIFEASNNSMSELRATVGNSYKCSAEENLQVTDKVLVNVFNVQVQV
FKVDGDKFGAVEECQLDENNMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggggctgctggcggcggccgccctgctgggctttttacaggtttcctcttcg
tttgatgtgagagattcatctggcaaagtctgcataattgctaatctgacagcagccttc
tcagtggaatacaaaagcaatgggcaaaaacagtttgcacacttctttcttccacaaaat
gccacaacagagccacacagctcatgtggtgaaggtaacacatctcagccaactctagca
ttgagttttggagcaggacacttgttaagactgaatttctcgaaaactgtggataagtac
caagttgaaaagctaattttcacctacaacttgtcagatgcaactttattccataattca
actgaaggaaaagtgatggaagcgtcccaaaaatctgttattcaggcacgtatggacaca
gaatacagatgcatcaactccaagcacatccttatgaagcatgtgaacattacttttagc
aacgtgactttggaagcctttcccacaaatggcactttcagcagaaacaagactgaatgc
tctgaagatatggtttctactactactgtagtaccaacaactcctaaacagactactagc
caggttccaacagctagcccagcaccaactgcatcgcctccaaatcctgcagttggtaaa
tataatgtgactggtacaaatggaacctgtgtgcttgcctccatggggctacagcttaat
atcacctatccaaaaaaagatgaaaagatggggttagacttgctgaatttcataccacat
aatacaactgcttctggaaaatgtgacaacgcgtctgccttcctaaatttgacttttgag
aaaacaaagattatcttccacttcgtattgaatgcaagtaatgacaaattcttcctgcga
ggtgtgagtgtcagcacgactctgccttctgaagcaaaagctccaatatttgaagcgtca
aacaacagcatgagcgaactgagagctacagtagggaactcctacaagtgcagtgcggag
gagaatctccaggtcacagacaaagtccttgtcaacgtgtttaatgttcaggtccaggtt
ttcaaggtcgatggagacaaatttggggcagtggaagaatgtcagctggatgaaaacaac
atgctgatccctataatagttggtgcagcccttgctggtcttgttctaattgtcttgatt
gcttatttgattggcagaaagaggagccatgctggatatcaaacaatttaa
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