Cygnus atratus (black swan): 118257562
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Entry
118257562 CDS
T09349
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118257562 (TFIP11)
Spliceosome [BR:
cata03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118257562 (TFIP11)
Other components
Complex C specific factors
118257562 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
118257562
NCBI-ProteinID:
XP_035421582
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All DBs
Position
17:complement(14593535..14602007)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGAEDGVELERFEVSEWDLHNEFNPHRARHRPSKEEATYGVWAERDSDEERPSF
GGKRSRDYSAPVNFISAGLKKAAAAAEDGSEEDSEEDEKPAKQEEMPKEFVPKKLKTGGN
FKPSQKGFVGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGKGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRINKQLSAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDA
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLTHEIQKMSEVLSHEETAI
SNLSKVLDMVEECERRMQPNCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKDYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHGGQDLSTDAFHRLMWEIWMPYVR
NIVAQWQPRNCGSMVDFLDSWVHVVPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGMAASSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcgcggaggacggcgtggagctggagcgcttcgaggtg
tcggagtgggacctgcacaacgagttcaacccgcaccgcgcgcggcaccggccctccaag
gaggaggccacgtacggcgtgtgggcggagcgcgactcggacgaggagcggcccagcttc
ggcggcaagcgctccagagactactcggcccccgtgaacttcatcagcgccgggctgaag
aaggcggcggcggcggcggaggatgggtcggaggaggactctgaggaagatgagaagccc
gccaagcaggaggaaatgcccaaggagttcgtgccaaagaagctcaaaacgggcggtaac
ttcaagcctagtcagaaaggcttcgtaggggggacaaaatctttcatggactttggcagc
tgggagagacacaccaagggaatcgggcagaagctcctccagaagatgggttatgttccc
ggaaaaggtctcgggaagaatgctcaaggtattatcaacccgattgaggccaaacagagg
aaaggcaaaggagctgtgggagcatacggctctgaacgaaccagccagtctctgcaagac
ttccctgttgttgactcagaagaagaagctgaggaggaatttcaaaaagagctcagccag
tggcggaaggatcccaatggaggcaagaaaaagcccaaatacagctataagacagtagaa
gaactgaaagccaagggcaggatcaacaaacagctttcagcccctcagaaggagctgtct
caagtcaaggttatagatatgacgggccgggaacaaaaggtttattacagctacagtcaa
attagccacaagcacaacatcccagacgacagccctcagcagccgctgggcaaagacgcc
aagccgcagggatttgccttgcctgagctggagcacaacttacagctcctcatcgacatc
acggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtcgtc
aacctgacccacgagattcagaagatgtctgaagtcctctcgcacgaggagaccgcgatc
agcaatctcagcaaggtcctggacatggtggaagagtgcgagagacggatgcagcccaac
tgtgagaatcccttgaccctggatgagtgtgcaaagatttttgagacgctccaagacaag
tactacgaagaatacagaatgtctgatagggtagacctggcagtggcaatagtctatcct
ctcatgaaagattacttcaagaactgggatcccctcaaggactgtacgtacggcacggag
attatagccaagtggaagagccttctagaaaacgaccagctcttatcgcacggtgggcag
gacctctcgacagatgcttttcacagactgatgtgggaaatctggatgccgtacgtcaga
aacatagtagctcagtggcaaccgaggaactgtggatcgatggtggatttcttggatagc
tgggtacacgttgttcccgtgtggatactggataacattctggatcagctcatcttcccc
aagctacagaaagaggttgaaaactggaatcctttgacagacacagtcccaatccattcg
tggatccatccctggcttcccctgatgcaggcacgattagagccgctctattctcccatc
cgaaacaagctggcgaacgcgctgcagaaatggcatcccagcgactcctcagccaaactc
atccttcagccctggaaggacgtgttcacccctgggtcgtgggaggccttcatggtcaaa
aacatcgtgcctaagctagggatgtgtttgaacgaactcataataaacccgcaccagcag
cacatggatgccttctactgggtgattgactgggaggggatgatttctgtctccagtctt
gtcgggctgctggagaaacacttcttccccaagtggctgcaggtgctgtgctcttggctc
agtaacagccccaattacgaagagattacgaagtggtacttgggctggaagtccatgttc
tcagaccaagtgttggcacatccgtcgatcaaagacaaatttaacgaagctcttgatatc
atgaaccgggctgtctcttccagcgttggtggctacatgcagccgggtgctcgggagaac
atcgcgtacctcacgcacacggagcggaggaaagacttccagtatgaggccatgcaggag
cggcgagaggccgagaacatggcccagcgaggcatcggcatggctgccagctccgtgccg
atgaacttcaaggacctgattcagacaaaggcagaggagcacaacatcgtgttcatgccc
gtgatcggcaagcggcacgaagggaaacagttgtacacgtttggacggattgtgatttac
atcgacaggggcgttgtgtttgtgcaaggagaaaagacttgggtgccgacctccctccag
agcctcatcgatatggcgaagtga
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