KEGG   Cygnus atratus (black swan): 118257758
Entry
118257758         CDS       T09349                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cata03032]
    118257758 (RIF1)
DNA replication proteins [BR:cata03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    118257758 (RIF1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 118257758
NCBI-ProteinID: XP_035421999
LinkDB
Position
6
AA seq 2308 aa
MSAAAGLQPLLETLEDPAAPPGELTDAHLAIVSRLTGEEGKEFTADVRRHFPQLCKVFKA
HISSANSELSNAALQALGFCVFNSKITSELSATEVHDLLSTVNSIALKTSDKNTRTRALW
VISKQTFPSEIVKKEVSNIISTLETILTKGEVQSMVVEYEALNVVIRLMEQTPAQMGEEA
VRWAKLIIPLVVHSAHKVQLRGATALEMGMPLLLQKQQEVAAVTEHLMTTKLISELQKLF
STKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGSPVVKKIAFIAWKSLI
DNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLMRLGPQLPANFEQVC
VPLIQSTLSLDSSAALPGTPSRVPTNQNLGLANPTQKSGSYPFASPATPRMNLNSSTAGV
VVIPSIQLLGIEMLLHFFMGPEVLDFAKQNKLVLSLEPLQHPLISSSSFFCKHAATLINA
VQDGFIAIGKEVPDSTLNIIWKDINGYVKTAIESGNKKEKQGSEVLTMLLQALKNTVRSN
SLPVQKILSLVDITVKELPPKVLGSPAYQVADMDLLNGTPALFLIQLPFHDNLLEWCVTD
ERFFVILETLVGYVLSGPTSPLAFSESVLCIINKNAKLVENKEHLWRMWSIVVNPLTEWI
NRTNEVNQGDALEHNFNAVYSALLLPVALIFPVQEFPQPTMKSLLRTWSDLYRAFARCAA
LVATAEENLCCEELCAKIISGLEGETPVVSSMMDGLTHILSVMVDCINFAPYGIKYQPKN
RSPQTPTDWSKKKREPLGKLSSLFKLLVMLINSFHTFSSNEIRSEALVSVGPSIIAILHN
IISHVSLPLVIGTMLAIFSKPLAVFYEKTKLADVPKAYSNLNNKLEKLLAEIIQCLQSHC
TGSYDSELLEQLSPLLCIMFQHKSKQIRKQCAHFWNATFAKAASLTYPEELKSVLSQVKQ
KIPLLLPGFESIEIAEEHSAPFSEEMENSQWDAKMSGMEANLGRKRDSILAQTNELKDKP
SNVQVTPAKLKLEFSSSKAKNERPLEEEKSVDFVFIPPEAKPRILTEHQKEVLRSKRIGI
PAMYNNLDTSQDTTLFSQYTQSQEDSLEKPSLIENAKEDNKNNPQEDNEKSEGCITESDE
ITGDCKSDTSFSHPQESSVTHMESNSTVNSEGESKSDMAELMQEEPAVGEGLEKSTTETV
SKESLVGNKDASNVSSSSTSSDVISGTPQPASRRQSFITLEKFDSSENRPFSVSALNSMS
EVSGSSSVPDKQENANKYKTATKLEKSGEENKNSSQSEQIFTAIRRLTRRQSKMEQLENK
HSRLSRSEQEKSVQESVSNSMETSPEPSYAMEDTERVLTAQSQALSSTEAEIKKVEDAIA
EIERVRALDTDSKENTPPEAAGSSDQVTDDDNQVPHVSPSQKTLRRSSRRRSETGEVSAG
SQDKEDGHQKKDKRKEDEKSLQKKLPQTKDDVSQKQKAVSGKTTDTANRKESSLPERTAA
EDSGSVGDEEVNKSTRKSEDKLKMDVEGQDCSSGTIGEKKKERPRYHTRSSSQGLLSSIE
NSEADGCETKEESIKKKKSGKVKTRSDSLEGKLKDLQPGSRGQEEVSSQENESKNLLETN
RSELSDEVSRDMSLSEPQDLKNEVIPTDAGGAGGSACPETSADTQNTCGEQTKTGVVTES
FTNPSVSEVLKAGEENTHIERQRNAGDCSSVLPDYVRGANASGSEPSSLQVPECQHKRSK
RQRKLRSCDCCYRKAKRPAMSFTELKTEDSPDPNEPQTTPVQTAVNTSEMSASSNFEESL
AMAPCAMSTPRLHSKEPSAFNLERERKSEDNLQGNTCSMEEEENPARVAGELDDSIMEIK
VAIDEDDGTEQGVPECASDEPADSCLAAENQSEKPGATVKEEENENGPMEEIPGALSVVS
RPEGEQMNELESNQDDEEQAENAVAESCAVLDKEMKEELIEAEITVPENVAVECEGAVEN
NVDSPQKPENLDSFALVNESPNSMQARCMWSPSASPSTSILKRGVKRNQDDDSLSPANKI
RRVSFANPIYQEGLADDIDRRSPVIRSHSSPSSRSLKILSNIQAKHITTPTKGFLSPGSR
NPKFKSSKKCLITEMAKESLPSPTECMYPALAGCKAPVDVILPQITSNICARGLGQLIRA
KNIKTVGDLSTLTASEIKTLPIRSPKVSNVKKALKGYHEQQVKSRGCEELVVLEDVEKTI
NNVEDKSVDDEKLATDLIEPVVLSANGQPTADLLSQIDALAAQLTSEVLYGYSGSQLFEM
QEKLAGMTNCIMKNLQSRWKSPPHDSSN
NT seq 6927 nt   +upstreamnt  +downstreamnt
atgagcgccgccgccggcctgcagcccctgctggagacgctggaggacccggcagccccg
ccgggggagctgacggatgcgcacctcgccatcgtcagtcgcttgactggtgaggaaggc
aaagaattcactgctgatgtcagaagacactttcctcaactttgcaaagtgtttaaggca
catatctctagcgcaaattcagagctaagtaatgcagcattacaggccttgggattctgc
gtttttaattcgaagatcacgtctgagttatcagcaactgaagtacatgacttgctttca
acggtaaacagcattgctttgaaaacttcagacaaaaacactcgcactcgagcactttgg
gtgatttctaagcagacgtttccttctgaaattgttaaaaaggaggtgtccaatattatt
tctacactggaaacaatacttactaaaggagaagtccagtctatggttgttgaatatgaa
gcactgaatgttgttatacgcttaatggagcaaaccccagcccagatgggagaagaggct
gtgaggtgggcaaagctgatcattcctctggtcgtccattcagctcataaagtgcagcta
cgaggtgccactgcactggagatgggcatgcccctgctgctgcagaaacagcaggaggtg
gcagctgtcactgaacacctaatgaccacaaaattaatttcagaacttcaaaaactgttt
tctacaaaaaatgagacttacgtcttaaaattatggccgctgtttgtcaaattacttgga
aagactctgcatcgtagtggcagtttcatcaattcattgctgcagctggaggaacttgga
tttcgtagtggctcaccggtagtaaagaaaatagccttcattgcatggaagagtctaata
gataattttgctttaaatccagatatattgtgcagtgctaaaaggctgaagttgttaatg
cagcccctgagctcaatccatgtgagaacagaggctttagcactgacgaaactggaagtc
tggtggtatttgctcatgaggctggggccgcagctgcctgcaaactttgaacaggtttgt
gtaccgttaatccagagtactctaagtctagattcttctgctgcattgccaggaactccc
tcacgtgtaccaaccaaccaaaatctaggtttggcaaaccctacacagaaatcaggttct
tatccatttgcaagtccggccacaccaagaatgaacttgaattctagtactgcaggagtg
gtggtgattccttctattcagcttctgggaattgagatgctgcttcacttcttcatggga
ccagaagttttggattttgcgaagcaaaacaaacttgtacttagtttagagcctctccag
cacccactgatcagcagctcatcttttttttgtaagcatgccgccacacttataaatgca
gttcaggatggatttattgcaattggaaaagaagttcctgattctacgctgaatattata
tggaaggacataaatggatatgtaaaaacagctattgaatcaggtaataagaaagaaaaa
caggggtcagaagtactgactatgttacttcaggccttaaaaaacactgttagatcaaat
tctcttccggtgcagaaaatactgtctctcgttgatattactgttaaggaattacctccc
aaagtattaggatcaccagcttatcaggttgctgatatggatcttttaaatggaacgcca
gctttgttcttaattcagctgcctttccatgataaccttttggaatggtgtgtaacagat
gagaggttctttgtaatcctagaaactctcgtgggttacgttttatctgggcctacatct
ccactggctttcagtgaatctgtgttatgcattattaataagaatgcaaagctggtggaa
aacaaggaacatctttggagaatgtggagtattgttgttaacccgctaaccgaatggatt
aatcggactaacgaagtaaatcagggtgatgcactggaacacaacttcaatgctgtttat
agtgcactgttgctaccagtagcccttatcttccctgttcaggaatttccacagccaact
atgaagtccttgctgcgcacttggtcagacctgtatagagcatttgctcgctgtgctgct
ttagttgcaacagcagaagaaaacctgtgctgtgaagagctttgtgccaaaataatatct
gggctagaaggtgaaactccagtagtgtcttcaatgatggatggtctcacccatatttta
tcagttatggttgactgcatcaactttgcaccatatggtattaaatatcagccaaaaaat
agatctccacagacacctacagattggtctaagaaaaaaagggagccccttggaaagctt
tcttctctgtttaaactcctggtgatgttaataaactctttccatacgttcagttccaac
gaaatccgttcagaagcattggtctctgttggtccttcaattattgctattcttcacaac
atcatcagccacgtttcattgcctttggtgattgggacgatgttggcaattttttcaaaa
ccactggcagtgttttatgaaaaaacaaagcttgctgatgtacctaaagcatacagtaat
cttaacaacaagcttgaaaaactgctggccgagataattcagtgtttgcagtctcactgc
actggctcgtacgacagtgaactactagagcagctttctccattgctctgcataatgttt
cagcataagagcaaacagatccgcaagcagtgtgcccacttctggaacgcaacatttgct
aaggctgcatcactgacataccctgaagaattaaagtctgtgttaagccaagtcaaacag
aaaattccactcctgctgcctggctttgaaagcattgagatagccgaagaacatagcgcg
ccgttctctgaggagatggaaaattcacagtgggatgcaaagatgagtgggatggaagcg
aatctgggtcgaaaacgagattccatattggctcagacaaatgaactaaaagacaagccc
agtaatgtgcaagtaacacctgcgaagttaaaactagagttttcatcttcgaaggctaaa
aacgagagacccctggaagaagagaaatctgttgattttgtgttcattcctccagaagca
aaaccaagaatattgacagaacatcaaaaagaagtgcttaggtcaaagagaattggtatt
cctgctatgtacaacaatttagacacttcacaagatacaaccttattttctcagtatact
cagagccaggaagattctttggaaaagccatctttaatagaaaatgcaaaagaagataat
aaaaacaatcctcaggaagacaacgaaaagagtgaaggctgcatcactgaatcagatgaa
atcacgggggactgcaaatcagatacttctttctcacatcctcaagagagttctgttact
cacatggagagcaactcaactgtaaatagtgaaggggagtcaaaaagtgatatggctgaa
ctgatgcaggaggagccagcagttggagaggggttagaaaaaagtaccacagaaacagtt
tcaaaggagtctttagtaggaaacaaagacgcttcaaatgtcagtagcagttcgacttca
agtgatgtaatttctggaactccccagcctgcaagccgacggcaatcttttattactttg
gagaaatttgacagttcagagaacagacccttcagcgtttcggcgttaaacagtatgtca
gaggtgtctggaagctcttctgtgccagataaacaggaaaatgcaaacaagtacaagact
gctactaaactagaaaaatctggggaagagaacaaaaattcttcacagtctgaacaaata
tttactgcaatacggaggctaactcgcaggcagagtaaaatggagcagctagaaaataag
cattccaggttaagtaggtcagaacaagagaaaagtgtgcaagagtctgtttccaacagt
atggaaaccagtcctgaaccgtcttatgccatggaggacacagaacgtgttctcactgct
cagtcccaagctctcagttctacagaagcagaaattaaaaaagttgaagatgcaatagca
gaaatagaaagggttcgggctttagatacggattctaaagaaaatacacccccagaggca
gctggttcgtctgaccaggtaacagatgatgataatcaggtcccacatgtgtctcctagt
cagaaaacactaagacgttcttcaaggcgacggtcagaaactggagaagtgtcagcgggt
agtcaagataaggaagacggccaccagaaaaaggacaaacgtaaagaagatgaaaaatcc
ctgcaaaagaagttgccacagactaaagacgatgtatcccaaaagcagaaagcagtgtct
gggaaaacaacagacactgcaaacagaaaagaaagcagcctacctgagagaactgctgca
gaggactctggctcagtgggtgatgaggaggtgaacaaaagcactaggaagtcagaagat
aaattgaagatggacgtggaaggtcaagactgtagctcaggtacaataggcgagaagaaa
aaggaacgcccacgataccatacaagaagcagctcacaaggattgctttccagcatagaa
aattcagaggctgatggctgtgagaccaaggaagaaagcataaagaagaagaaatctgga
aaagtgaaaaccagaagtgattctcttgaaggtaaattgaaagacctacagccaggaagc
cgtggccaggaggaggtgtcttcccaagaaaacgaaagtaaaaatctgttggaaacaaat
agaagtgaactaagtgatgaagtcagcagagacatgtcattgtctgaaccacaggacctg
aaaaatgaagtaattcctacagatgctggtggagctgggggatctgcctgcccagagact
tcagctgatacgcagaacacgtgtggggaacaaaccaagaccggggtggtgacagaatct
tttaccaacccaagtgtatctgaagttctgaaagcaggagaggaaaacacacacattgaa
aggcaaagaaatgcaggagactgttcaagtgttctgcctgactatgtacgaggagcgaat
gcttcaggtagcgagccttcctctttgcaagtacctgagtgtcagcacaagagaagcaaa
aggcagagaaaactaagaagctgcgattgctgttacagaaaggcaaagcggccagcaatg
tcattcactgagctgaaaactgaggacagtcctgacccgaatgagccccaaaccacccca
gttcagacagctgtaaatacatcagagatgtctgctagctcaaattttgaggagagcttg
gccatggcaccttgtgcaatgagcacaccacggcttcattctaaggaacccagcgcgttc
aacttggaaagagagagaaaatctgaagataacctgcaagggaatacttgcagtatggag
gaggaggagaatccagcacgtgtagcaggggaacttgatgattccataatggaaataaaa
gtagctattgatgaggatgacggaactgaacagggtgtacccgagtgtgcttcagatgag
cctgctgacagctgcctggctgcagagaatcaaagtgaaaaaccaggagctacagtaaag
gaagaagaaaatgagaatggaccaatggaggagatacctggggcactgagtgttgttagc
aggcctgagggagaacagatgaatgaactagaaagcaatcaggatgatgaagaacaagct
gagaacgctgtagcagaaagttgcgctgttctagataaagagatgaaagaggaattgata
gaagctgaaattacagtacctgaaaatgtggccgtagagtgtgaaggtgcagtagaaaat
aatgtggattcacctcagaagccagaaaatcttgattcttttgctttagtaaacgaaagc
cctaacagtatgcaggcacgctgcatgtggtctccttcggcttctccatccacgagcatt
ttaaagagaggtgtaaaaagaaatcaagatgatgattccctgtcacctgctaataagatt
cgtcgtgtctcttttgcaaatcccatttatcaagaaggactggcagatgacatagacagg
aggagccctgtcattagatcccattcttcgccatcttcacgaagtcttaaaatcttatct
aacattcaggctaagcatattaccactccaaccaaaggatttctgtccccaggatctcgt
aaccctaaatttaagagctcaaagaagtgtttaattacagaaatggctaaggaatcactg
ccttctcctacagaatgcatgtatcctgccttagcaggctgtaaagcaccagtcgatgta
attttacctcagattacgtcaaatatatgcgcaagaggtttggggcagctcattcgagca
aagaacattaagacagtgggtgatctgagtactctgacagcatcagaaatcaaaactctt
cccatccgttctcctaaagtttccaatgttaaaaaagctcttaaaggatatcacgagcag
caggtaaaatcccgagggtgtgaggaattggtagtgcttgaagatgtagagaaaacaata
aacaacgtagaggataaatctgttgatgacgagaaacttgcaacagatttgattgaaccg
gttgtcttgagtgcaaatggccaacccacagcagatcttctgagccaaatcgatgccctt
gctgctcagctgacctctgaagttctctatggctattcaggaagccagctctttgagatg
caagaaaaacttgcgggcatgacaaactgtatcatgaaaaacctgcagtcccgctggaaa
tcgcctccccacgacagttccaattag

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