Cygnus atratus (black swan): 118257836
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Entry
118257836 CDS
T09349
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04371
Apelin signaling pathway
cata04514
Cell adhesion molecule (CAM) interaction
cata04517
IgSF CAM signaling
cata04518
Integrin signaling
cata04519
Cadherin signaling
cata04520
Adherens junction
cata05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118257836
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118257836
04517 IgSF CAM signaling
118257836
04518 Integrin signaling
118257836
04519 Cadherin signaling
118257836
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118257836
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118257836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118257836
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118257836
04090 CD molecules [BR:
cata04090
]
118257836
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
118257836
Cell adhesion molecules [BR:
cata04515
]
Cadherins
Major cadherins
118257836
CD molecules [BR:
cata04090
]
Proteins
118257836
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Motif
Other DBs
NCBI-GeneID:
118257836
NCBI-ProteinID:
XP_035422116
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All DBs
Position
12:1225469..1228912
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AA seq
670 aa
AA seq
DB search
MSPCALLLLLLLQDAVLSTQADVVAFPKSGPDLRRQKRDWVIPPISCLENHRGPFPMKLV
QIKSSKDKETKVFYSITGQGVDSPPVGVFTIERETGWLEVTQPLDREEIGKYVLFSHAVS
ANGQPVEDPMEIIITVTDQNDNKPVFTKQVFVGYIEENAKPGTSVMTVSATDADDTVKVD
NGIISYSIVSQEPPRPHHQMFTIDPQKGVISVLSTGLDRETTPNYTLIVQATDQEGKGLS
TTATAVIEVTDANDNIPVFNPNMYEGTVDENEVGLEVARLHVTDQDMPGSPAWQAVYRIK
SGDQDGAFSIATDPNTNDGILRTAKGLDYETRSRYDLVVTVENKVPLSVSLRLSSASVLV
LVRDVNEPPVFVPPVKRVEVSEDLPVGHEVTSYTAQDPDKDQRNKITYRMGSDPAGWLAI
HPENGIVTAVQPLDRESVHAINSTYKAIVLAVDNGVPDATGTGTLLLHLQDVNDNGPTPE
PRIFDICSRQPEEQTLTIVDKDLPPNTYPFEAALEHGSSTNWTVKVSGQDSLVLKLHKEL
EPGEYSIFLRLTDSQGKAQVTQVKAQVCECEGAAKNCQQGAFTATAIIEIRDTIDNAPVF
SFTMVVPKEPLKMQAAHRDGHGLQATATTVISTQMRRRALPVVQEGSRAPSRRRLPPGRQ
AGRTSTACPR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccctgcgccctcctcctcctcctcctcctgcaggacgcggtgctcagcacccag
gcagatgttgtggccttccccaagtccggccccgacctccgaaggcagaagagggactgg
gtcatcccccccatcagctgcctcgagaaccaccgggggcccttccccatgaagctggtg
cagatcaaatccagcaaggacaaggagaccaaggttttctacagcatcacggggcagggg
gtggacagcccccccgtgggcgtcttcaccatcgagcgtgagacggggtggctggaggtg
acgcagccgctggaccgcgaggagatcgggaaatacgtcctcttctcccatgcagtgtcg
gccaacgggcagcccgtggaggacccgatggagatcatcatcacggtgacagaccagaac
gacaacaagcccgtcttcaccaagcaggtcttcgtcggctacatcgaggagaacgcgaag
ccgggcacctccgtgatgaccgtgagcgccacggacgcggacgacacggtgaaggtggac
aacggcatcatcagctactccatcgtcagccaggagccgccgcgcccgcaccaccagatg
ttcaccatcgacccccagaagggcgtcatcagcgtcctcagcacggggctggaccgggag
accacccccaactacacgctgatcgtccaggccacggaccaggagggcaaggggctgtcc
accaccgccacggccgtcatcgaggtcacggatgccaacgacaacattcccgtcttcaac
cccaacatgtacgaggggacggtggacgagaacgaggtggggctggaggtggccaggctg
cacgtgacggaccaggacatgccgggctccccggcctggcaagccgtctaccgcatcaag
agtggagaccaggacggcgccttcagcatcgccaccgaccccaacaccaacgacggcatc
ctgagaaccgccaagggcctggactacgagaccaggagccgctacgacctcgtggtgacg
gtggagaacaaagtccccctctccgtgtccctcaggctctcctcggccagcgtcctggtg
ctcgtcagggatgtgaacgagccccccgtcttcgtgccccctgtcaagagggtggaggtg
tcggaggacctgccggtggggcacgaggtcacatcctacacagcccaggaccccgacaag
gatcagaggaacaaaatcacgtaccgcatgggcagcgaccccgcggggtggctggccatc
caccccgagaacggcatcgtcacggccgtccagccgctggaccgggagtcggtgcacgcc
atcaacagcacctacaaggccatcgtcctggccgtggacaacggggtgccggacgcaact
ggcacggggacgctgctgctgcacctccaggatgtgaacgacaacgggcccacgccggag
ccccggatcttcgacatctgcagccggcagcctgaggagcagacgctgaccatcgtcgac
aaggacctgcccccaaacacgtaccccttcgaggcagcgctggagcacggctccagcacc
aactggaccgtcaaggtgtccggccaagactcgctggtcctgaaactgcataaggagctg
gagccgggggagtacagcatcttcctgaggctgacggacagccagggcaaggcgcaggtg
acacaagtcaaagcccaggtgtgcgagtgcgaaggggcagccaaaaactgtcagcaggga
gcgttcactgccacggccatcatcgagatcagggataccatcgacaacgctcccgtcttc
agcttcaccatggtggtccccaaagagcccctgaagatgcaggctgctcacagggacgga
cacgggctccaagccaccgccaccactgttatcagcacgcagatgaggcgccgggccctc
ccagtggtgcaggaggggagccgggctccgtcccgcaggcggctgccccccgggaggcag
gcaggtcggacgagcacggcttgcccgcggtga
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