KEGG   Cygnus atratus (black swan): 118257836
Entry
118257836         CDS       T09349                                 
Name
(RefSeq) cadherin-1-like
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
cata  Cygnus atratus (black swan)
Pathway
cata04371  Apelin signaling pathway
cata04514  Cell adhesion molecule (CAM) interaction
cata04517  IgSF CAM signaling
cata04518  Integrin signaling
cata04519  Cadherin signaling
cata04520  Adherens junction
cata05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cata00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    118257836
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    118257836
   04517 IgSF CAM signaling
    118257836
   04518 Integrin signaling
    118257836
   04519 Cadherin signaling
    118257836
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    118257836
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    118257836
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cata03036]
    118257836
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cata04515]
    118257836
   04090 CD molecules [BR:cata04090]
    118257836
Chromosome and associated proteins [BR:cata03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    118257836
Cell adhesion molecules [BR:cata04515]
 Cadherins
  Major cadherins
   118257836
CD molecules [BR:cata04090]
 Proteins
  118257836
SSDB
Motif
Pfam: Cadherin Cadherin_FAT4_N Ig_CLSTN
Other DBs
NCBI-GeneID: 118257836
NCBI-ProteinID: XP_035422116
LinkDB
Position
12:1225469..1228912
AA seq 670 aa
MSPCALLLLLLLQDAVLSTQADVVAFPKSGPDLRRQKRDWVIPPISCLENHRGPFPMKLV
QIKSSKDKETKVFYSITGQGVDSPPVGVFTIERETGWLEVTQPLDREEIGKYVLFSHAVS
ANGQPVEDPMEIIITVTDQNDNKPVFTKQVFVGYIEENAKPGTSVMTVSATDADDTVKVD
NGIISYSIVSQEPPRPHHQMFTIDPQKGVISVLSTGLDRETTPNYTLIVQATDQEGKGLS
TTATAVIEVTDANDNIPVFNPNMYEGTVDENEVGLEVARLHVTDQDMPGSPAWQAVYRIK
SGDQDGAFSIATDPNTNDGILRTAKGLDYETRSRYDLVVTVENKVPLSVSLRLSSASVLV
LVRDVNEPPVFVPPVKRVEVSEDLPVGHEVTSYTAQDPDKDQRNKITYRMGSDPAGWLAI
HPENGIVTAVQPLDRESVHAINSTYKAIVLAVDNGVPDATGTGTLLLHLQDVNDNGPTPE
PRIFDICSRQPEEQTLTIVDKDLPPNTYPFEAALEHGSSTNWTVKVSGQDSLVLKLHKEL
EPGEYSIFLRLTDSQGKAQVTQVKAQVCECEGAAKNCQQGAFTATAIIEIRDTIDNAPVF
SFTMVVPKEPLKMQAAHRDGHGLQATATTVISTQMRRRALPVVQEGSRAPSRRRLPPGRQ
AGRTSTACPR
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtcaccctgcgccctcctcctcctcctcctcctgcaggacgcggtgctcagcacccag
gcagatgttgtggccttccccaagtccggccccgacctccgaaggcagaagagggactgg
gtcatcccccccatcagctgcctcgagaaccaccgggggcccttccccatgaagctggtg
cagatcaaatccagcaaggacaaggagaccaaggttttctacagcatcacggggcagggg
gtggacagcccccccgtgggcgtcttcaccatcgagcgtgagacggggtggctggaggtg
acgcagccgctggaccgcgaggagatcgggaaatacgtcctcttctcccatgcagtgtcg
gccaacgggcagcccgtggaggacccgatggagatcatcatcacggtgacagaccagaac
gacaacaagcccgtcttcaccaagcaggtcttcgtcggctacatcgaggagaacgcgaag
ccgggcacctccgtgatgaccgtgagcgccacggacgcggacgacacggtgaaggtggac
aacggcatcatcagctactccatcgtcagccaggagccgccgcgcccgcaccaccagatg
ttcaccatcgacccccagaagggcgtcatcagcgtcctcagcacggggctggaccgggag
accacccccaactacacgctgatcgtccaggccacggaccaggagggcaaggggctgtcc
accaccgccacggccgtcatcgaggtcacggatgccaacgacaacattcccgtcttcaac
cccaacatgtacgaggggacggtggacgagaacgaggtggggctggaggtggccaggctg
cacgtgacggaccaggacatgccgggctccccggcctggcaagccgtctaccgcatcaag
agtggagaccaggacggcgccttcagcatcgccaccgaccccaacaccaacgacggcatc
ctgagaaccgccaagggcctggactacgagaccaggagccgctacgacctcgtggtgacg
gtggagaacaaagtccccctctccgtgtccctcaggctctcctcggccagcgtcctggtg
ctcgtcagggatgtgaacgagccccccgtcttcgtgccccctgtcaagagggtggaggtg
tcggaggacctgccggtggggcacgaggtcacatcctacacagcccaggaccccgacaag
gatcagaggaacaaaatcacgtaccgcatgggcagcgaccccgcggggtggctggccatc
caccccgagaacggcatcgtcacggccgtccagccgctggaccgggagtcggtgcacgcc
atcaacagcacctacaaggccatcgtcctggccgtggacaacggggtgccggacgcaact
ggcacggggacgctgctgctgcacctccaggatgtgaacgacaacgggcccacgccggag
ccccggatcttcgacatctgcagccggcagcctgaggagcagacgctgaccatcgtcgac
aaggacctgcccccaaacacgtaccccttcgaggcagcgctggagcacggctccagcacc
aactggaccgtcaaggtgtccggccaagactcgctggtcctgaaactgcataaggagctg
gagccgggggagtacagcatcttcctgaggctgacggacagccagggcaaggcgcaggtg
acacaagtcaaagcccaggtgtgcgagtgcgaaggggcagccaaaaactgtcagcaggga
gcgttcactgccacggccatcatcgagatcagggataccatcgacaacgctcccgtcttc
agcttcaccatggtggtccccaaagagcccctgaagatgcaggctgctcacagggacgga
cacgggctccaagccaccgccaccactgttatcagcacgcagatgaggcgccgggccctc
ccagtggtgcaggaggggagccgggctccgtcccgcaggcggctgccccccgggaggcag
gcaggtcggacgagcacggcttgcccgcggtga

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