Cygnus atratus (black swan): 118257908
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Entry
118257908 CDS
T09349
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04217
Necroptosis
cata04622
RIG-I-like receptor signaling pathway
cata04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118257908
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118257908
04625 C-type lectin receptor signaling pathway
118257908
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118257908
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118257908
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118257908
Peptidases and inhibitors [BR:
cata01002
]
Cysteine peptidases
Family C67
118257908
Ubiquitin system [BR:
cata04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118257908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
118257908
NCBI-ProteinID:
XP_035422243
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Position
2:159551802..159566284
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AA seq
785 aa
AA seq
DB search
MSLLPSVGDGNCYYILTEDCAYGSKYFKSGNMCFCSERSYLRSFADRPSARFLKVVMLDD
GSTVTINVEILQPVRKEVAALLLGVGSPSERLDCFLERLSLEAALRAVPGQKVTAEIDRQ
HFPGVIRYVGSIHKSASAALSPVFFGVELQGEGESRGRSDGSYHGTEYFKCKPSCGIFLP
FSRVQFTPAPDNDYGKQKPKVEAEEVVPVKVGDAVSFYVDEVLTKGIAMAVYREGSQWFV
KVCPEEEGTTDIFREIPMDSVVKENLLSQSVFSTFESDVGLGHSKQVKRQASESGEESES
GNPPLEVNSMVQITLDKGNQVFGIIRWLGYLPQIKHKMAGVELDEDKGVTAGEWLGKYYF
HCAPKRGLFVKLQSCQPDVRFQCSRGGDLNLVDDGGREALPHAPVSFPPLRNEEAVSVLR
GRMKGIQGHCNSCYMDAALFSLFSCTSVLDSMLFTPFTLCDRNVQDILREEIVNPLRKAG
FVKARSVMHLREQLTEKGKCSSFTNAEKDPEEFLSLIMQKILGIEPLLKLQSGGHEGLDC
YCYQIFMDKQEDLVVPDVQQLVEHSFLTYDQKLVEIPSCFIIQMPRFGKEYKMFSKIIPS
LELDITDLLLDSPRECCVCGDVATLECSGCFKDKIFAPTGLKQFCGTCSKQVHSHYRRKA
HKPTRLHVPEEFQCRSPQGSQRVPREKMELFAVLCIETSHYVSFVKYGPENEHWMFFDSM
ADRHGDENGFNIPTVTLCPEVAKYLDLPLAVLALEQPRDMDGVAKRLFCDAYMYMYQSKK
MALYK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcctgccttcggtaggggacggcaactgctactacatcctgacagaagactgc
gcctacggcagcaagtacttcaaatccgggaacatgtgcttctgcagcgagaggagctac
ctgcgcagcttcgcggaccggccctcggctcgtttcctcaaagtcgtcatgctggacgac
ggctccaccgtcaccatcaacgtggaaatcctgcagccggtgcgcaaggaggtggccgcc
ctcctcctgggcgtcggcagccccagcgagcgcttggactgcttcctggagaggctgagc
ctcgaagcagccctgcgagccgtgccgggccagaaggtgacggcggagatcgaccggcag
cacttccctggcgtcatccgctacgtcgggagcattcacaaaagcgcctcggccgccttg
tccccggtcttcttcggggtggagttgcagggcgagggggaaagcagagggcgcagcgac
ggatcttaccacggcaccgaatatttcaagtgtaagccaagctgcgggatcttcctgccc
ttcagcagagtgcagtttactcccgccccggataacgactacgggaagcagaagcccaaa
gtggaagcggaggaggtggtgcccgtgaaggtgggagacgcagttagcttctacgtggac
gaggtcctgacgaagggaatagcgatggcggtttacagggagggatcccagtggttcgtc
aaagtttgcccggaagaagaaggaacaactgacatcttcagagaaatccctatggactcc
gtcgtgaaggaaaacttgctttctcaaagtgttttttcaacattcgaatccgacgtgggc
ttgggacactcgaagcaagtgaaacggcaggcgagcgagagcggcgaggagagcgaaagt
gggaacccccccttggaggtgaactccatggtccagatcaccttggacaagggaaatcag
gtgtttggaatcatccgctggctggggtacctaccccagatcaagcacaaaatggcagga
gttgaactggatgaagataagggggtcactgctggcgagtggctgggcaaatactacttc
cactgcgctccaaagcgcggcctcttcgtgaagctgcagtcctgccagcctgacgttcgc
ttccagtgttcgcgcggcggcgacctgaacctcgtggacgacggcgggcgggaagctctt
ccccacgctcccgtcagttttccccccctcaggaatgaggaggcggtgtccgtcctgcga
gggcggatgaaagggatccaaggccactgcaactcctgctacatggatgcagctctcttc
agcctcttctcctgcacgtccgtgctggactccatgctcttcacgcctttcacgctgtgt
gacaggaacgtgcaggacatcctgcgggaggagatcgttaatcccctccgaaaggctggc
ttcgtcaaggctcggagcgtgatgcaccttagggagcagttaaccgagaagggcaaatgc
tcgagctttaccaacgctgagaaagatcccgaggagttcctcagcctcataatgcagaag
atcctgggaatagagccgctcctgaaactgcagtccggaggccacgagggactggactgt
tactgctaccagatatttatggacaaacaggaggacctggtggttcctgatgtacagcag
ttagtggaacattccttcctgacctacgaccagaagctagtggagatcccgtcttgcttc
atcatccaaatgccgcgatttggaaaggaatacaaaatgttcagcaagatcatcccttcc
ttagagctggacatcaccgatctgctgctcgacagtcccagggagtgctgcgtgtgtggc
gacgtcgccaccctggagtgctcggggtgtttcaaggacaagatatttgcgcctacgggc
ctgaagcagttctgcggcacctgctccaaacaggttcactcccactaccgccgcaaagcc
cacaagccgaccaggctgcacgtcccagaggagtttcagtgccggagcccccagggtagc
cagcgggtcccccgcgagaagatggagctcttcgccgtgctctgcattgagaccagtcac
tacgtctccttcgttaagtacggccccgagaacgagcactggatgttcttcgacagcatg
gctgacaggcacggtgatgagaacggcttcaacattcccaccgtgacgctgtgccccgaa
gttgccaaatacctggacttgccgctggctgtgctggccctggagcagccccgggacatg
gacggggtggccaaacgcctcttctgcgacgcctacatgtacatgtatcagagcaagaag
atggcgctttacaagtga
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