Cygnus atratus (black swan): 118257928
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Entry
118257928 CDS
T09349
Symbol
TOP1MT
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X2
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cata03032
]
118257928 (TOP1MT)
Enzymes [BR:
cata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118257928 (TOP1MT)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Topoisomerases
118257928 (TOP1MT)
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
CCDC93_CC
DUF6937
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
118257928
NCBI-ProteinID:
XP_035422285
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Position
2:complement(159128089..159142378)
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AA seq
593 aa
AA seq
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MSWCLTTSLLGRGVPRPRIVPPGLRAGSGICSRWEEEKTADGVKWTQLEHRGPYFAPLYE
PLPDDVQFYYDGKPLKLSLATEEIATFYAKMLDHEYTTKEIFQNNFFNDWRKEMTPQEQK
IIKHLDKCDFREIHKYFVDKNEARKALPKEEKQKLKEAADKIQEEYGYCILDGHREKIGN
FKTEPPGLFRGRGDHPKMGMLKKRIMPEDVVINCSKDSKIPEPPAGHKWKEVRFDNTVTW
LASWTENIQNSLKYIMLNPSSKLKGEKDWQKYEVARKLKDVVHKIRAEYQADWKSKEMKK
RQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPELDGQEHVVEFDFLGK
DSIRYYNKVSVEKPVFKNLQLFMKNKDPGDDLFDRLTTVILNKHLQNLMNGLTAKVFRTY
NASITLQEQLKALTNSEDSVAGKLLSYNRANRAVAILCNHQRSTPKTFEKSMQNLQSKID
AKKQQLEEAEKELKKAENEFEETKDAKAEANVQKKKKLLERLKEQLAKLNVQATDKEENK
QIALGTSKLNYLDPRISIAWCKKFGVPIEKIYNKTQREKFAWAIDMADEDFEF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtgtctcaccacctcgctgcttggtcggggggtccctcgcccccggattgtc
ccccccggcctccgtgcaggctcggggatctgcagcaggtgggaagaggagaagacagcc
gacggggtgaagtggacgcagctggagcaccgaggaccctacttcgcccccctctacgag
ccgctgcctgacgatgttcagttttattacgatggcaaacccctgaagctgagcctggcc
acggaggagattgctaccttctatgccaaaatgcttgatcacgagtacaccaccaaggag
atcttccagaacaacttttttaatgactggaggaaggagatgacccctcaggagcagaag
ataatcaagcacctggacaagtgtgacttcagagagatccacaagtactttgtagacaaa
aacgaggcacggaaagcactccccaaagaggagaagcagaaactgaaggaggcggcagac
aagatccaggaagagtacgggtattgcatcctcgatgggcaccgggagaagataggcaac
tttaaaactgagcctccggggcttttccgtggccgtggtgaccaccccaaaatgggcatg
ctcaagaagaggatcatgccagaggatgtggtcatcaactgcagcaaggactctaagatc
cccgaaccgcctgcgggccacaaatggaaggaggtgcgctttgacaacacggtcacctgg
ctggcctcgtggaccgaaaacatccagaactccctaaagtacatcatgctgaaccccagc
tccaagctgaagggggaaaaggactggcagaagtacgaggtagcccggaagttaaaggac
gttgtccacaaaatccgtgctgagtaccaggctgactggaagtccaaggagatgaagaag
cggcaaagagcagtggccctctacttcattgataagctggccctgcgagctggcaatgag
aaagaggaaggggagactgcggacacagttggctgctgctccctgcgcgtggagcacatc
aagctgcaccccgagctggacgggcaggagcacgtggtggagtttgacttcctcgggaaa
gactccatccgctactacaacaaagtgtcggtggagaagccggtgttcaaaaacctgcag
ctgttcatgaagaacaaggacccaggagatgacctctttgataggctcactacggtcatc
ttgaacaaacacctccagaatctgatgaacggtttgactgccaaagtgttcaggacctac
aacgcttccatcacactgcaggagcagctcaaggccctcactaactctgaagacagcgtt
gcaggaaagctgctctcctacaaccgagctaaccgagctgtggccatcctgtgcaaccat
cagaggtccacgccaaaaacctttgagaagtcaatgcaaaacctccagagtaagattgat
gccaagaagcaacagctggaggaagctgaaaaagagctgaaaaaagctgaaaatgagttt
gaagagacaaaagatgccaaagcagaggccaatgtacagaagaaaaaaaagctgctggag
cgtctaaaagagcagctggccaagctgaatgtccaggccacagacaaggaggagaacaag
cagatagctctgggcacgtccaagctgaattacctggaccccaggattagcatagcctgg
tgtaagaagtttggtgtgcccattgagaagatctacaacaagacacaaagggagaagttt
gcctgggcgatcgacatggccgatgaggactttgaattctga
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