Cygnus atratus (black swan): 118258020
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Entry
118258020 CDS
T09349
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118258020 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118258020 (DHX36)
03012 Translation factors [BR:
cata03012
]
118258020 (DHX36)
Enzymes [BR:
cata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118258020 (DHX36)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118258020 (DHX36)
Translation factors [BR:
cata03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118258020 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
118258020
NCBI-ProteinID:
XP_035422421
LinkDB
All DBs
Position
9:25600132..25620731
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AA seq
983 aa
AA seq
DB search
MSSEQRRGWARGGDGGPAASSSSASAGGHGGRGGGGRGRHPSHLKGREIGLWYARKQGQR
SKETDRQQRAVVRMDERREEQIAQLLTAVQSRSEKEPDAMSWWSGDEDGNTPEQPAKVKP
EPEKAPIKQRPVLEKTFLDRDVEYLFEKNQQDTDLDEQLKEDLRKKKSDPRYIEMQRFRE
KLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPR
RISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMVH
IPGFTFPVVEYLLEDVIEKLRYMPENTDRRPRWKKGFMQGHISRPEKEEKEEIYRERWPE
YLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLH
DLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARR
KELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHL
LAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
TVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPARIAQLVKNLRQELDDLLQEKIENPHPVDWNDTTSRDTAVLTAIID
LITTQENESARNYAPRFQNERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggagcagcggcgcggctgggcccggggcggcgatggcggccccgccgcctcc
tcctcctccgcctcggccggcgggcacggggggcgtggcggcggcggccgggggcggcac
cccagccacctgaagggccgcgagatcgggctgtggtacgcgcggaagcagggccagagg
agcaaggagacggaccggcagcagcgggccgtggtgcggatggacgagcgccgggaggag
cagatcgcgcagctgctgacggccgtgcagagcaggagcgagaaggagcccgacgccatg
tcctggtggtccggggacgaggacggaaatactccagaacagcccgcaaaagtgaaacca
gaacctgaaaaagctcctatcaagcagagaccagtcttggaaaaaacattccttgatcgg
gatgtggaatatctatttgaaaaaaatcagcaagataccgatttagatgagcaacttaaa
gaagatttaagaaagaagaagtctgatcctagatatattgaaatgcagaggttccgagag
aaactcccttcgtatgggatgagacaggaacttgtaaaccttataaacaataatcgagta
actgtgataagtggcgaaaccggctgtggaaagaccacacaagtcacgcagttcatcttg
gatgactacatagagcgagggaaagggtctacctgcaggattgtttgtactcagcctagg
aggatcagtgctatctcggtggctgagagagttgctgctgaaagggcagaagcatgcggt
aatggcaagagtacgggataccagattcgtcttcagagtcggttaccgaggaaacaaggt
tcaattttatactgtaccacaggaattgtcctacagtggctccagtcagataagcatttg
tccagtattagtcatgtagtccttgatgaaattcatgaaagaaatcttcaatcagatgtt
ttaatgagcattattaaagatcttttgaatgtccgtttggatctgaaagtaatactaatg
agcgctactttaaacgcagagaagttttctgaatattttgataattgcccaatggttcac
atacccgggttcactttcccagtggtggagtatcttcttgaagatgtaattgagaagttg
aggtatatgccagaaaacacagaccgtcggccacggtggaagaaaggcttcatgcaaggg
catataagcagaccagaaaaagaagaaaaagaggaaatctacagggaacggtggccagaa
tacttaaggcagctgcggggcaggtattccgcaagtactatagatgccttggaaatgatg
gacgatgacaaggttgatcttgaccttatagcagcacttatcagacacattgttttggaa
gaagaggatggtgcaattctagtgtttcttccaggatgggacaacattagcactttgcat
gatctcttgatgtcacaagtcatgtttaagtcagataggtttattatcatacctttacat
tcattgatgcctactgttaaccagactcaggtgtttaagaagaccccgccaggagtaagg
aaaatcgtgattgctaccaacattgcagagactagcattacaatagatgacgtggtgttc
gttatagatggtggaaagataaaggaaacacactttgatacccagaacaacatcagcaca
atggcagcagagtgggttagtaaagctaatgccaagcaaaggaaaggtcgagcaggaaga
gttcagccaggtcactgttaccatctatacaatgggctccgtgctagccttctagatgat
tatcaactacctgagatcttgaggacacctttggaagaactttgcttgcaaatcaagatt
ctaaagcttggaggaattgcttattttctgagcaaactaatggatccaccatctcgtgat
gctgtaatgttggctataaatcatctgatggagctgaatgctttggacagacaagaggaa
ctgactccactaggtgtacatctagcacgattaccagttgaaccacatatcggaaaaatg
attctctttggagctttattctgttgcttggatccagtccttacaattgcagcaagcctc
agcttcaaagacccttttgtcattcctttgggcaaagagaaagtagcagatgcaagaaga
aaggagctttcaaagaacacaaaaagtgatcatctgacagtggtgaatgctttcacaggc
tgggaagagactcggcgccgtggattcagaactgagaaagactattgctgggaatatttc
ctgtcttcaaatacgctccagatgctgcataacatgaaaggacaatttgctgagcatctc
cttgcagctggatttgtgaatagcagagaccccaaggatcccaaatctaacaccaactca
gataatgagaagttgctcaaagcagtcatctgtgctggtttatatccaaaagttgcaaag
attcggccaagctttagcaaaaagagaaaaatggtgaaagtttgcaccaagacagatgga
acagttaatattcatcctaaatctgttaatgtggaagagacagagttccattataactgg
ctcgtgtaccatttgaagatgagaactagcagtatttacttatatgattgtacagaagtc
tctccgtactgcctcttgttctttggaggagatatatccattcagaaggataaagatcag
gataccattgctgtggatgaatggattgttttccagtctccagctagaatagcacagtta
gttaagaacttaagacaagagctcgatgatcttctacaggaaaaaatagaaaacccacac
ccggtggactggaatgatactacatccagggatacagcagtactgaccgctattatagac
ttaatcacaacacaggagaatgaaagtgccagaaactatgctccacggtttcagaacgag
cgctatagttga
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