Cygnus atratus (black swan): 118258067
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Entry
118258067 CDS
T09349
Symbol
PODXL
Name
(RefSeq) podocalyxin isoform X1
KO
K06817
podocalyxin-like
Organism
cata
Cygnus atratus (black swan)
Pathway
cata05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118258067 (PODXL)
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Gene cluster
GFIT
Motif
Pfam:
CD34_antigen
DUF6719
Motif
Other DBs
NCBI-GeneID:
118258067
NCBI-ProteinID:
XP_035422480
EnsemblRapid:
ENSACYG00000010457
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Position
1:3370433..3411460
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AA seq
592 aa
AA seq
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MRAPLLLLLLLLHGVSSDDDGTVAKSTTASPGEAKQITTTIATSNVQGSSPTSKPGSQPP
NPGTSPPTTPGAAPTSKPGSPAPSIPATSPTTAPKTTPTSTLRSPPTTQPSATTTPANKP
TDKPDDPLPSPTTSPSAPQKVSPSASSRTIPTTAPSTAQQKTTPAATSGGSVAKPAASPV
PTQASSPPTTSRGSVVAVTTSLCSVDQGSCPSGQLASTVGSTGVPAASLPPSVKDLSASD
PQSITDQPRSSPASPVQRLASSPQPGSTVTSATPSAGSVSPAPGKTPPSLPTGSTGKVSN
AATTPTPRADRTSQGSVPDKPGLTEQSPTSAQPSAPAQGDQTISSRPGQQHPNISFKNEI
ICDNQIQDTWPIINLKEAKTCADWRAASSNESFFEIFCSIGRQAFDIRRDKCTVTLASSA
PQRWAVHAVVHRLLDPEAVFEELKEKRNELEKLGIVNVTYLNQEMEEEVKDQYSTPLIIT
IITLACSLLLVAAIYGCCHQRFSQKKNQQHIHPDLPGFDDGRAILIFNQRLTEELQTMEN
GYHDNPTLEVMETCSEMQEKKVNLNGELGDSWIVPLDTIMKEDLEEEEDTHL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcaccgctgctgctgctcctgctgctgctgcacggtgtcagctctgacgatgat
ggtaccgttgcaaagtcaaccacggcgagcccaggagaagctaagcagatcaccaccact
atagccaccagcaacgttcaagggagctcccccacgagcaagccgggcagccaacctccc
aaccctgggacgtcgccccccacaactccaggggcagcccccacaagcaaaccgggaagc
ccagcaccctccatccctgcaacatcacccaccactgctccaaagaccacccctacaagc
actctgaggagcccacccaccacccagccatcagcaaccacaactccagccaacaagccc
acagacaagccagatgaccctctgccttcccccaccacgtcacctagtgctcctcagaag
gtcagcccttcggccagctccaggaccatccctacgacagcccccagcaccgcccagcag
aagaccacccccgcagccacctcgggaggctcggtagccaagcctgctgcaagccccgtt
cccacccaggcgagcagccccccaaccacctcgaggggctcggtggttgctgtcacaaca
tctctgtgcagcgtagatcagggaagctgcccctcgggccagttggccagcactgttggg
agcactggagtcccagcagccagccttccacccagcgtcaaggacctcagtgcctctgat
ccccaatccatcactgaccagcctcgctcttctcctgcttctccagtccagaggctggcc
tcttctcctcagccagggagcactgtcacctctgctaccccttcggctgggtccgtgtcc
cctgcccctggtaaaacacctccgtctttacccactggcagcacaggcaaggtctcaaat
gctgccaccacaccgactcctcgagcagaccgcacaagccaaggatctgtgccagacaaa
cccggacttactgagcagagccccaccagtgcccagccatcagcaccagcccagggggac
cagacgataagcagcaggcctggccaacagcaccctaatatttccttcaaaaatgagatc
atttgtgacaaccagatccaagacacgtggcccatcataaatctgaaagaagctaaaacc
tgtgccgactggagggctgccagcagcaacgagtccttcttcgagatcttctgctccata
gggcggcaggcgttcgacatccgcagggacaagtgcactgtgacgctggcctcctccgca
ccccagcgctgggctgtgcacgcggtggtgcaccgccttttagaccctgaagctgtcttc
gaggagctgaaggagaagaggaatgagctcgagaagctgggcatcgtcaacgtcacctac
ctcaaccaggagatggaggaggaggtgaaggaccagtacagcacgcccctcatcatcacc
atcatcaccctggcctgctccctgctgctcgtcgcggccatctacggctgctgccaccag
cgtttctcccaaaagaagaaccagcagcacatccaccctgatctccccgggtttgatgat
ggacgtgccatcctgatctttaatcagcgcctgacggaggagctgcagacgatggagaac
ggctaccatgacaaccccacgctggaggtgatggagacctgctcagaaatgcaggagaag
aaggtgaacctcaacggcgagctgggcgacagctggatcgtccctctcgacaccatcatg
aaggaagacctggaggaagaggaggacacgcatttatag
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