Cygnus atratus (black swan): 118258089
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Entry
118258089 CDS
T09349
Symbol
SNX1
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118258089 (SNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118258089 (SNX1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118258089 (SNX1)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Macropinocytosis
Sorting nexins
118258089 (SNX1)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118258089 (SNX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
Ribosomal_60s
Phage_T7_Gp13
VIR_N
HR1
Motif
Other DBs
NCBI-GeneID:
118258089
NCBI-ProteinID:
XP_035422533
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All DBs
Position
11:10559270..10572679
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AA seq
514 aa
AA seq
DB search
MASGGAGGSRSPSPGPHLPPPFPPPHGDGEAADSDTEGEDIFAGTSKPPAPKRESLLPVS
SSSKENGVRVEQDDQDLFADATVELSLDSTQNNQKKELAKASNPAPSLEVAASSSSRNPP
KSYEELEEEEQEDKFELTVGVSDPEKVGDGMNAYVAYKVSTQTSMPMFRSKQFSVKRRFS
DFLGLYEKLSEKHAQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLRR
VVSHPTMLQDPDVREFLEKEELPRAVGTQALSGAGILKMFNKATDAVSKMTIKMNESDIW
FEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALS
QLAEVEEKIEQLHQEQANNDFFLLAELLGDYIRLLSVVRGAFDQRMKTWQRWQDAQTMLQ
KKREMEARLLWANKPDKLQQAKEEISEWESRVTQYERDFERISAVIRKEVIRFEKEKSKD
FRKHVTKYLETLLNSQQQLVKYWEAFLPEAKAIS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcggcgccggcggctcccgctccccctcccccgggccgcacctgcccccg
ccctttcccccgccccacggcgacggcgaggccgccgacagcgacacggagggggaggac
atcttcgccggcaccagcaagcccccggcaccaaaaagggaatcgcttctccctgtgagc
agcagctccaaagaaaatggggttcgcgtagagcaagatgatcaggacttatttgcagat
gccactgtagagctgtctctagacagcacgcaaaacaaccagaagaaggaactggccaaa
gcatccaatcctgccccctcattagaagtagctgcaagctcttcttctagaaaccctcca
aagagctatgaggagctggaagaagaggagcaggaggacaaatttgagctgactgtagga
gtgagtgacccagagaaagttggggatggcatgaatgcgtacgtagcctacaaagtgtca
acgcagacgagcatgccaatgttcaggagcaagcagttttcagtgaaaaggaggttcagt
gactttctgggtctctatgagaagttgtcggagaagcatgcccaaaatgggttcatcgtg
cctccaccgcctgagaagagtctcataggaatgaccaaagtgaaagttgggaaagaagat
tcctcctctgcagagttcctagaaaaaagacgggctgctctagagaggtacctacggaga
gttgtcagccatccaaccatgctgcaagacccagacgtcagggagttcttggaaaaggag
gagctgccgagagcagtaggcacccaggccctgagtggagcaggaatactgaagatgttc
aacaaagctaccgatgctgtcagtaaaatgaccattaagatgaatgaatcggacatatgg
ttcgaggagaagctgcaggaggtggaatgtgaggagcagcggctacggaagctgcatgct
gttgtggaaacgctagtgaaccacaggaaagagctagcgttgaatacagcacagtttgca
aagagtctggccatgctggggagctcggaggacaacacggccctgtcccgggcactgtcc
cagctggctgaggtggaagagaagattgaacagctgcaccaggaacaggctaacaatgac
ttcttcctcctggctgagctcctgggagactacatccgcctcctctcagttgtaagggga
gcttttgaccagcgcatgaagacctggcagcggtggcaggacgcccagaccatgctgcag
aagaagagggagatggaggccaggctgctctgggccaacaaacctgacaagctgcagcag
gccaaagaggagatctcagagtgggagtctcgcgtgacgcagtatgaaagggactttgaa
cggatttctgccgtgatccgcaaggaagtgatacggttcgagaaagagaaatccaaggac
ttcagaaaacacgtgactaagtaccttgagacgttactaaactctcagcagcagctggtg
aagtactgggaagcattcctgcctgaagccaaggccatttcttaa
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