KEGG   Cygnus atratus (black swan): 118258111
Entry
118258111         CDS       T09349                                 
Symbol
PATL2
Name
(RefSeq) protein PAT1 homolog 2 isoform X1
  KO
K24823  protein PAT1 homolog 2
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cata03019]
    118258111 (PATL2)
Messenger RNA biogenesis [BR:cata03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     118258111 (PATL2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 118258111
NCBI-ProteinID: XP_035422580
LinkDB
Position
11:10550185..10556256
AA seq 727 aa
MAEEDEELDLYNEMTFGLDRDSTEEDAAKTQVPLERSPELVETKEEPQADEGQPPSEEQG
EPQSEGGMEPEAEQVGSEEEEEEEEELGAEEQHEDEPNDLGDPAVMRAVQSKPTLESQDS
AVLDSRIGSVWAEFGKEDMLAMEPMVWGSCPSSIPPHHMLEDKAILQVLETPPPAANVAL
DFLGSPVQRGYVGSPRLKRPDFRGMSPKSFPQRFLRQQPPLMPRSMCSPRPFPPARRASS
LFASNQSTGYAPPTPFRPLSPNIGTPPQPLAMHFGPMSPSLDPSPFFSPSASSQFNFSMP
SHLTQLHPQHQRILTQRQQQGGTVQSVSPKKLWSPKADPYAGLMTCKEKDWVVKVEMIQL
QSENMDDDYYYQTYYHRLERKQAEEELLGGRNKQEPPKLVTPFIQKVETYNSVVRIAGSL
GQVAVSTCYSPRRAIDAVHHALVEEAAGSHRLRALHRIERLFLQLLEVEEMQRKVSLAPE
EQEQKTQEAGRIYQALKIRACSSEEEAEDEFLQVLCVRKGKKLTARLLPHLASEQAEKIL
LTITHHLPFLMKKDALDESLPLLYSPLNEVVGRMTFSRLIEVLQEITRPLPESDEFPLAM
ALKNQVCWASPACRGHHGWTRSHDAPPGASLQFGITLLYSLLSRGEGLLSSETPLEPHGR
DFETWTDTVFLVARELSQVPKASLVEPLFLPSNLLSLFCRYLDKQTVHHLEAKMECSPLP
SEAAMPC
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggccgaggaggatgaggagcttgacctgtacaatgagatgacatttgggttggaccgt
gactccactgaggaggatgctgcgaaaacccaagtgcctttggagaggagccctgagctt
gtggagaccaaggaggagccccaagcagatgaggggcagccaccatcagaggagcaggga
gagccccagagtgaaggtgggatggagccagaggctgagcaggtgggctccgaggaggaa
gaagaggaagaagaagagttgggggctgaggaacagcatgaggatgagcccaacgacttg
ggagacccagcagtgatgagagctgtgcagagcaagcccacactggagagccaggactca
gcagtgctggacagcaggattggctctgtctgggcagaatttggcaaagaggacatgctg
gccatggagcccatggtgtggggctcctgccccagcagcatcccaccccaccacatgctg
gaggacaaagccatcctgcaggtcctggagacgccccctcctgccgccaatgtggccctc
gacttcctcggctcccctgtgcagagggggtatgtgggctctccccggctcaagcgcccc
gacttcagagggatgtcccccaagtctttcccccagcgcttcctccggcagcagccacct
ttgatgccgcgctccatgtgctcccctcggcccttcccaccagcccgcagagcttcttct
ctctttgcttccaaccagtccacggggtacgcacctccaacccctttcaggcccctgtca
cccaacattggcaccccgccgcagccccttgccatgcacttcggcccgatgtctccttct
ctggacccctctcccttcttcagcccctcggccagcagccagttcaacttcagcatgccc
agccacctcacccagctgcacccccagcaccagcgcatcctgacccagcggcagcagcaa
ggcgggacggtgcagagtgtctcccctaagaagctgtggtcccctaaagctgacccgtat
gctgggctgatgacctgcaaggaaaaggattgggtcgtcaaggtggagatgatccagctg
cagagtgagaacatggatgatgactactactaccagacctactaccatcggctggagcgc
aagcaggcggaagaggagctcctgggtgggcgcaacaagcaggagccccccaagctggtg
acacccttcatccagaaagtagagacctacaactctgtggtgcgcattgctggctcgctg
ggccaggtcgctgtgtccacgtgctacagcccccgccgagccattgatgctgtgcaccat
gccctggtggaggaggctgcggggagccaccggcttcgagcgctgcacaggatcgagagg
ctcttcttgcagctgctggaggtggaggagatgcagcggaaggtgtccctggccccagag
gagcaggagcagaagacccaggaagcggggcgtatctaccaggccctgaaaatcagagct
tgcagcagtgaggaggaggcagaggatgagttcctgcaggtcctgtgtgtgcggaaaggc
aagaagctcacagcgcggctgctgccccacctggcctcagagcaagcagagaagatcctg
ctgaccatcacccaccacctgcccttcctcatgaagaaagacgcactggatgagtctctt
cccctgctctacagccctttgaatgaggtggtgggcaggatgaccttcagcaggctcatt
gaggtcctgcaggagattaccaggcccctgcctgagtccgacgagtttccgctcgctatg
gccttgaagaaccaggtatgttgggcatccccagcatgcaggggacatcatggatggaca
cgcagccatgatgctcctcctggtgcttctctgcagtttggcatcaccttgctctactcc
ctgctgagccgtggtgaggggctgctgtcttctgagacaccactggagccacatggcaga
gactttgagacatggacagacacggtgttcctggtcgctcgggagctgtcacaagtcccc
aaggcctcgttggtagagccactcttcttgcccagcaacctcctctcactattctgccgc
tacctggacaagcagactgtccaccacctggaggccaagatggagtgctccccgttgcca
tcggaggctgccatgccatgctaa

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