Cygnus atratus (black swan): 118258215
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Entry
118258215 CDS
T09349
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118258215 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118258215 (SMARCD2)
03036 Chromosome and associated proteins [BR:
cata03036
]
118258215 (SMARCD2)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118258215 (SMARCD2)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118258215 (SMARCD2)
PBAF complex
118258215 (SMARCD2)
GBAF(ncBAF) complex
118258215 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
118258215
NCBI-ProteinID:
XP_035422764
LinkDB
All DBs
Position
25:complement(5888309..5902734)
Genome browser
AA seq
456 aa
AA seq
DB search
MGPAAAQYQRPGMPPGSRMPMAGLQVGPPGAPPYGAASPLRPGLPQSMMDPFRKRLLAPQ
SQPPMASQRRGVKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEA
IKKPLTQKRKLRIYISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKS
LVIELDKELYGPDNHLVEWHRLPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDP
RLARLLGVHTQTRASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFNCVRMRFSEIPM
KLAGLLQHPDPIIINHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIAS
LDAKIHETIESINQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRA
EFYQQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgcggccgcgcagtaccagcgccccgggatgccgccaggcagccggatgccc
atggcggggctgcaggtgggcccgcccggagcacccccgtacggagcagcctccccgctg
agacctggtctgccgcagtcaatgatggacccattcaggaagcgtctgctggcccctcag
tcgcagccgccgatggccagccagcggagaggggtgaaaaggaggaagatggccgacaag
gtcctgccacagaggatccgggaactggtcccagaatcccaggcctacatggacctcctt
gcctttgagcgcaagctggaccaaaccatcgctcggaagaggatggagattcaggaggcc
attaagaaaccactgacgcaaaagcggaagctgaggatttacatctccaacactttcacc
ccagccaaagaagaaggggagggtggtgagcgtgtggcctcctgggagctacgtgtggag
ggcaaactgctggaggacccgagcaagcagaagaggaagttctcctcctttttcaagagc
ctcgtcatcgagctggacaaagagctgtacgggccagacaaccatctggtggagtggcac
cgactgcccacgacccaggagactgacggcttccaagtgaagcgtcctggcgacgtcaat
gtgaagtgcaccctgctgctcatgctggatcaccagccaccgcagtacaaactggaccct
cgcctggctcgcctgctcggggtgcacacccagacccgcgccagcatcatgcaggcactc
tggctctacatcaagcacaacaagctgcaggacagtcacgagaaggagtacatcaactgc
aaccgctacttccgtcagatctttaactgcgtccgcatgcgcttctctgagatccccatg
aagctggcggggctcctgcagcacccggatcccatcatcatcaaccacaccatcagcgtg
gaccccaacgaccagaagaagacggcctgctatgacatcgacgtggaggtggatgacccc
ctgaaagctcagatgagcaacttcctggcttccaccaccaaccagcaggagatcgcctcc
ctggatgccaagatccacgagaccattgaatccatcaaccagctgaagacacagcgcgat
ttcatgctgagcttcagcaacaacccgcaggacttcatccaggaatggatcaaatcccag
aggagggacctcaaaatcataacggacgtgattgggaaccccgaggaggagcggcgagct
gagttttaccagcagccctgggctcaggaggctgtgggcagacacatcttcgccaaggtc
cagcagcgtcggcaggaactggaacaagtgcttgggatccgcctcacttaa
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