Cygnus atratus (black swan): 118258347
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Entry
118258347 CDS
T09349
Symbol
RTEL1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cata03032
]
118258347 (RTEL1)
Enzymes [BR:
cata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118258347 (RTEL1)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118258347 (RTEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
ARCH_RTEL1
Helicase_C_2
HHD_RTEL1
ResIII
DEAD
C1_2
Motif
Other DBs
NCBI-GeneID:
118258347
NCBI-ProteinID:
XP_035422974
LinkDB
All DBs
Position
16:1520678..1566759
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AA seq
1307 aa
AA seq
DB search
MPRITLNGVPVDFPFQPYKCQEVYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWR
EHFKDTISARKIAQRMNGVELFPDRPMSSWGNAATDADVPTYYTDIPKIIYASRTHSQLT
QVINELKNTVYRPKICVLGSREQLCINSEVKRQESNHVQIYMCRMKVMTRSCHFYNNVEE
KSTEKELVNSIMDIEDLIKNGNKHRACPYYLSRSLKQQADIIFMPYNYLLDSKSRRAHNL
DLKGTVVILDEAHNVEKLCEESSSFDLTAYDLASAIDTLNILLEEQAKAVQQKEVNAEFS
MEVDNSGLNMELEDLAKIKKILLQLESAIDEVELPPNKNGVTKDGSYIFDLFAKAQITFQ
TKSSLLESLEQILQFLSSRTGVFVNTSGLHKLSDIIQTVFNINPPEGTTSFVPPQSISKY
YKVHIHLDNGNQKKQKTNVWDSSAAKKQGKTLSYWCFSPGYSMHDLVRQGVRTIILTSGT
LSPLSSFTMEMQIPFPVSLENPHVIDKHQLWVGIIPKGPDGAVLTSTYERRFSEDYLSSL
GKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWRKHDFAKRIEEVKPIFVEPKHKGSFAEV
MDAYYDKIVCPKSNGAAFFAVCRGKASEGLDFADINGRGVIITGLPFPPCMEPRVVLKMQ
FLDEMKRSCVGAQYLSGREWYNQQASRAVNQAIGRVIRHRQDFGAIFLCDHRFTTSDVRG
KLPSWVRPYVNVYDNFGHAVRSVSMFFRVAQEIMPPPLPQCVSGSADAQSENDLAPSTSS
EQILSLEKAKNLDDHVPSLKRKRIVMPVSGDGASSLCMEYEEKLFSPRKQRLGLLDALER
NEKSSEAAEEESGLPGEEEAQGLSTLSLQYEKRLTTEQKGGRKKIKLVSNPEADKIADPA
EPKKARATLYIATVKQTLSQQSYDLFSKALQHYKKTDDFNAMLAQMSSLFVEDEKKHILL
REFYQFVRPQHKKQFHEACCSLTGAGCGYKPEHSLLQEEREILAKKIEGKKSQQKTTSSK
DSYTQLNPRLHLNQGGFHLTTGLTSAGDNAGQAPSKVTEKASCSRKDHHQVLRTTYLNDV
KKALDKSTFSHFYEALLTYKKTDNYDAMIPVIAALTTERPEDFHLLRRFYMFVRPHHKEQ
FNQMCKDLTGMVCGGKEKQLQHTVQGERSPLSLESWCTKAENSHVQDATVPKSEVPEKTQ
REISSFCFNQENKLELPKTEEDSKETSNMRAPTCSGVVPLFPLEMEPECGRYQCSACKSE
DDVPFKCPFCAFTRCKTCWEQFLKMKRCPQCFSDVKKKRLTQAFFWL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatcacgctgaacggcgtcccggtggatttccccttccagccgtacaagtgc
caggaggtgtacatggccaaggtgctcgagtgcctgcagaagaaggtaaatggcattctg
gagagccctacaggtacaggaaagacgctctgcctgctgtgttccaccctggcctggcgg
gagcactttaaagatactatctcagcccgcaaaattgcacagcgtatgaatggagtcgag
ctctttcctgacagacccatgtcatcctggggtaatgctgccacggatgctgatgtccca
acttattacactgacattcctaaaataatttatgcatccagaacgcactcacaacttaca
caggtcattaatgaattgaagaacaccgtctacaggccaaagatatgtgttttgggttcc
agagagcagctttgcatcaatagtgaagtgaaacgacaagagagcaaccacgtgcagatc
tatatgtgccgaatgaaagtgatgactcgttcttgtcatttttataacaatgtagaagaa
aagagtacagagaaagaactggtcaactcgatcatggatattgaagacttgattaaaaat
ggaaacaagcatagagcttgtccttattatctctctcgaagcctgaagcagcaggcggat
attatttttatgccttacaactatttactagactcaaagagccgaagagcgcacaactta
gacctgaaggggaccgtggtaatacttgatgaagctcacaatgtggagaagttgtgtgaa
gagtcatcttcttttgacttgacagcctacgatttagcttcagcaattgatactttaaat
atactactggaagaacaagccaaagcagttcagcagaaagaagtaaatgctgagttcagc
atggaggtggacaattcagggctgaacatggaacttgaagatctagcaaagataaaaaaa
attcttcttcagctggaaagtgcaattgatgaagtggagttgcccccaaataaaaatgga
gtcaccaaagatggaagctacatctttgatctgtttgcgaaggcccaaataacattccag
accaaatcctcactcctggagtcactagagcagattttacagtttctttcaagccgtact
ggggtatttgtcaatacatctggactgcataagctttcagatattatccagacagtattc
aacatcaatcctccagaaggcacaacaagttttgtgccacctcagtcgatatccaaatac
tataaggtgcacattcatctggataacggtaatcagaagaagcagaagacaaatgtctgg
gattcatcagctgcaaaaaaacaaggaaagaccttaagctattggtgtttcagtcctgga
tatagcatgcatgatcttgttcgacaaggagtcaggacgattatccttaccagtgggact
ctttccccactctcctcatttacaatggaaatgcaaatcccttttcctgttagcttggag
aatcctcatgttattgataaacaccagctctgggttggaatcattcccaaaggacctgat
ggagccgtgctcacttccacttatgaaaggaggttttcagaggactatttatcttctctg
gggaaaacaattggtaatcttgtgcgagttgtacctcatggactgttggtgttcttccca
tcatatccagtcatggataagagcttggaatattggagaaagcatgattttgctaaaaga
atagaagaagtgaaaccaatatttgtggaacccaagcataaaggaagctttgcagaggta
atggatgcatactatgataaaattgtctgtcctaagtccaacggagctgctttttttgca
gtatgtcgggggaaggccagtgaaggcttggacttcgcagacataaatgggcgaggagtc
atcattactgggcttccatttcctccttgtatggagcccagagttgttttaaagatgcag
ttcctggatgaaatgaaaagaagctgtgtgggtgcacagtatttatctgggcgtgagtgg
tacaatcagcaagcttcccgggctgttaatcaggctatcggcagggtcatcagacatcgc
caggactttggtgctattttcctgtgtgaccacaggttcacaaccagcgatgtaagaggc
aagctgccttcatgggtccgcccttatgtgaatgtttatgacaactttgggcatgcagtc
agaagcgtctccatgttcttccgtgttgctcaagaaattatgcccccacccctgccacaa
tgtgtttctggctctgctgatgctcagagtgaaaatgatctggcaccatctacttcatca
gagcagatcctctccctggaaaaagccaaaaatttggatgaccatgttcccagtttgaag
aggaaaagaatagtaatgccagtaagtggagatggagcatctagcctgtgcatggagtat
gaagaaaaattgttctcacctagaaagcaacgtcttgggctcttggatgccttggagcgc
aatgagaagagcagtgaagctgcagaggaggaaagtggcttgccaggagaggaagaggcc
caaggtctgtcaacactctccctacagtatgagaagaggttaacaactgagcaaaaagga
ggaaggaagaaaataaagctagtcagcaatccagaagctgataagatagcagacccagct
gagccaaagaaggccagagctaccttgtacattgcaacagtgaagcagaccctaagccaa
caaagctatgatctcttctctaaggctcttcagcactacaagaagacagatgacttcaat
gctatgttagctcaaatgagttccctttttgtcgaggatgaaaaaaaacatatcttgcta
cgagaattttaccagtttgttcgacctcaacataaaaaacagtttcatgaagcatgttgc
agtctgactggagcgggctgtggctacaaacctgaacacagcctcttgcaggaagagaga
gagatactggcaaagaaaatagaaggaaaaaagagtcagcagaaaacaacatcctcaaag
gactcatacacgcagctgaaccctagactccacttgaaccagggaggatttcacttgaca
acaggactgactagtgctggggataatgctggtcaagctccaagtaaagtcactgagaaa
gcttcatgctctaggaaagatcaccaccaggtcctcaggactacctatctcaatgatgtg
aaaaaggctttggacaaaagcactttcagccacttctatgaagcgctgttaacttacaag
aagacagataactatgatgctatgataccagtgatagcagccctcaccactgagcggcca
gaagactttcatctcctacgaaggttttacatgtttgtgcgccctcatcacaaagagcag
ttcaatcagatgtgtaaagatttgactggaatggtctgtggtgggaaagagaagcaattg
caacacacagtgcaaggtgaaaggagccctctgagtttggagagctggtgcactaaggca
gaaaacagccatgtacaagatgccactgttcctaagagtgaggtgccagagaaaactcag
agagagatttcctccttctgctttaaccaggaaaataaacttgaattgccaaagactgaa
gaagattcaaaagaaaccagtaacatgagagcacccacatgctctggagttgtacctctc
tttcccctagagatggaaccagagtgtggaagataccagtgctctgcctgcaaatctgag
gatgatgtgccttttaaatgtccattctgtgccttcactcgctgcaaaacatgctgggag
cagttcttaaagatgaagaggtgcccgcaatgcttcagtgatgtgaagaagaagcgatta
acccaagctttcttctggttataa
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