Cygnus atratus (black swan): 118258465
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Entry
118258465 CDS
T09349
Symbol
NCSTN
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118258465 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
118258465
NCBI-ProteinID:
XP_035423214
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Position
28:1071863..1085046
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AA seq
716 aa
AA seq
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MAAGRARGRRGMAAAAGSPRLPAWCGPLRGLLLAVLAAGSCQGNSVERKIYIPLNKTAPC
VRLLNATHQIGCQSSISGDTGVIHVVEKEEDLNWVLADGPHPPYMILLDGNLFNRKVLMQ
LKGTSRVSGLAVSIAKPNPPQGFSPGLKCPNDGFGVYSKDYGPQYAHCNTTVWNPVGSGL
SYEDFDFPIFLLEDANETQVIKQCYQDHNVPRDGSGPEYPLCAMQLFSHMHAVTSTVTCM
RRNSIQNTFSINPETVCDPLLDYNVWSTLQPINSSGKVDREQEVIIVATRIDSHSFFWNI
APGAESAVSSFVTHLAAAEALHKASDVHLLQRNIMFTFFQGETFDYIGSSRMVYDMEKDK
FPLRLDNIHSFVELNQVALRNGSVLWMHTDPVSWMNESVQTQVRNLLDILRNSSVGANVT
LQEAGYSQPLPPSSFQRFLRARHIPGVVLTDHQAAFQNRYYQSMYDTPENIRMQYPEGLS
PEETLEYVTDTAKSLAEVATVVARALYRLAGGANNTSAIQADPKTVTRMLYGFLIKMNNS
WFQSIIKPDLKGILGDVPQHYVAVSSPVNTTYLVHYVLANLTGTVVNLTKEECLNPDKTP
NAEKELYDYAWVQGSLDPNSTTRVPYCVRSTVHLSKALSPAFELRQWGSTEYSTWTESRW
KEIRARIFLVASKELEIITLVVGIAILVFSLLATHFINAKADVLFSIPRDPGAVAY
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggagggctcggggcaggcgggggatggcggccgctgcggggagccctcgg
ctcccggcctggtgcgggccgctgcgggggctgctcctcgccgtgctggcggcgggctcc
tgccaggggaactccgtggagaggaagatctacatccccctgaacaagacggcgccgtgc
gttcgcctcctgaacgccacccaccagatcggctgccagtcctccatcagcggggacacg
ggagtgatccacgtggttgagaaggaggaggacctcaactgggttcttgctgatggcccc
cacccaccctacatgatattgctggacgggaaccttttcaacaggaaggtactgatgcag
ctgaagggaacctcccgagtgtcaggccttgccgtgtccattgccaaacctaaccctccc
caggggttctctcctggtttgaagtgccccaatgacgggtttggtgtctattccaaagat
tacggccctcaatatgcacactgcaatacgactgtgtggaatcctgtggggagtgggctt
tcatatgaggattttgacttcccgatttttctgcttgaagatgccaacgagactcaagtt
attaagcagtgttatcaagaccataatgtccctcgtgatggatctggccctgagtaccct
ctgtgtgccatgcagcttttttcccacatgcatgctgtcaccagcactgttacatgcatg
agacgcaactccatccaaaacacgttcagcattaacccagagaccgtatgtgatccgctt
cttgattacaatgtgtggagcaccttgcaacctatcaattcctctggaaaagtcgatcgc
gagcaggaagttatcattgtcgctacacgaattgacagccattccttcttctggaacatt
gcacccggggcagagagtgccgtctcctcttttgtgacccacttggctgctgctgaagct
cttcataaagcgtcagatgttcatttgctacaaagaaatataatgttcaccttcttccaa
ggggagacctttgattatattggcagttcacgaatggtgtatgatatggaaaaagacaag
tttcctctccgtttggacaacattcattcatttgtggagttgaatcaggtggctctaagg
aacggctccgttttatggatgcatacagaccccgtctcttggatgaatgaatctgttcaa
acacaggttagaaacctgctcgatattctgcgtaatagcagcgtgggagcaaatgtaact
ttgcaggaagctggatattcgcagcctcttcctccatcttccttccagcgcttccttcgg
gcccggcacatccccggagtggtcctaactgaccaccaggctgccttccagaacagatac
taccagagcatgtacgacactccagagaacatccggatgcaataccccgaggggcttagc
cccgaggagaccttggaatatgtcacagacacagccaagtccctggcagaagttgccaca
gtggtcgcccgtgctctctaccggcttgcagggggagccaacaacacctctgctattcag
gcagatccaaaaacggtcactcgaatgctttatgggtttctgattaaaatgaacaattcc
tggtttcagtccatcattaagcctgacctaaaagggattcttggtgatgttccccagcac
tacgtcgctgtttccagccctgtgaacaccacctatcttgtgcactatgttctggccaac
ctcacgggcactgttgttaacctcaccaaggaagagtgtttgaaccctgataaaacacca
aacgctgagaaagaactgtatgattatgcctgggtgcagggttctctggaccctaactcg
acaacacgagtcccctactgtgttcggtcaactgttcacctaagcaaagcgctctctcct
gcctttgagctgaggcagtggggatctacagagtattccacgtggacagagagtcggtgg
aaggagatccgcgcccggatatttctggtagccagcaaggagctagagataatcactttg
gttgtgggcattgccattctggtcttctccctcctcgccacgcattttatcaacgccaaa
gcggatgtactttttagcatccctcgggaccctggggctgtggcttactga
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