Cygnus atratus (black swan): 118258580
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Entry
118258580 CDS
T09349
Symbol
CHRNA1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cata04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
118258580 (CHRNA1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118258580 (CHRNA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118258580 (CHRNA1)
Ion channels [BR:
cata04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118258580 (CHRNA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
Motif
Other DBs
NCBI-GeneID:
118258580
NCBI-ProteinID:
XP_035423352
EnsemblRapid:
ENSACYG00000005204
LinkDB
All DBs
Position
6:17978217..17987835
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AA seq
456 aa
AA seq
DB search
MEICRVLLLVFSTAGLALCYEHETRLVEDLFRDYNKVVRPVEDHRDAVVVTVGLQLIQLI
NVDEVNQIVTTNVRLKQQWTDVNLKWNPEDYGGVKQIRIPSDDIWRPDLVLYNNADGDFA
IVKYTKVLLEHTGKITWTPPAIFKSYCEIIVTHFPFDQQNCSMKLGTWTYDGTVVVINPE
SDRPDLSNFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHFLMQRLPLYFIVNVIIP
CLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFT
MVFVIASIIITVIVINTHHRSPSTHTMPHWVRKIFIDTIPNIMFFSTMKRPSRNKPDKRI
FAEDIDISEISGKPGPMPVNFYSPLTKNPDVKNAIEGIKYIAETMKSDQESSNAAEEWKF
VAMVIDHLLLGIFMLVCIIGTLAVFAGRLIELNQQG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggagatctgtcgtgtgctcctccttgtcttctccacagccgggctggccctgtgctac
gagcacgagacacgcctcgtagaggacctgttcagggactacaacaaggtcgtgcggcct
gtcgaggaccatcgggatgccgttgtcgtcacggttgggctgcagctcatccagcttatt
aacgtggatgaagtaaatcagattgtaacaaccaacgtgcgtctgaagcagcaatggaca
gacgtcaacctgaagtggaatccagaagactatggcggcgtgaaacaaatccgcatccca
tcagatgacatctggcgcccggatcttgtcctttacaacaatgcagacggtgattttgcc
attgttaaatacaccaaagtccttctggaacacacaggaaagatcacttggacgccacct
gccatttttaaaagttactgtgaaattatagtcacgcacttcccatttgaccagcagaac
tgcagcatgaagctgggaacttggacgtatgatggtacggtggtggttattaacccggag
agcgatcgtcctgacctgagtaacttcatggagagcggcgagtgggtgatgaaggactac
cggggctggaagcactgggtttactacgcttgctgccccgacacgccctacctggacatc
acgtaccacttcctcatgcagcgcctgccgctctacttcatcgtcaatgtcatcattccc
tgcctgcttttctcatttttaactgggttggttttttatctgcccacagattcaggtgag
aaaatgactctcagcatctctgtcttgctgtctctgactgtgttccttctggtcattgtg
gagctgattccctccacctccagcgcagtgcctctgataggcaaatacatgctgtttacc
atggtgtttgtcatcgcttcaatcatcattacggtcatcgtcatcaacacccaccaccgc
tcccccagcactcacaccatgccgcactgggtcaggaagatctttattgacacaatccca
aacatcatgtttttctctacaatgaaacgaccatccaggaataaaccagacaaaaggatt
tttgcagaagatattgatatttctgaaatatctgggaagccaggtcctatgcctgtcaac
ttctactccccgcttaccaaaaatccagatgtgaaaaatgctatagagggaatcaaatac
attgcggaaacgatgaaatcggaccaagaatccagtaatgctgcagaagagtggaagttt
gttgcgatggtgattgatcatcttctccttggtatatttatgctagtttgtattattgga
acactagctgtatttgctggtcgcctgattgaattaaatcagcaaggatga
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