Cygnus atratus (black swan): 118258585
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Entry
118258585 CDS
T09349
Symbol
THBS3
Name
(RefSeq) thrombospondin-3
KO
K04659
thrombospondin 2/3/4/5
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04145
Phagosome
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118258585 (THBS3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118258585 (THBS3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118258585 (THBS3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118258585 (THBS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118258585 (THBS3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118258585 (THBS3)
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118258585 (THBS3)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Phagocytosis
Opsonins
118258585 (THBS3)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118258585 (THBS3)
Exosomal proteins of colorectal cancer cells
118258585 (THBS3)
Exosomal proteins of bladder cancer cells
118258585 (THBS3)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118258585 (THBS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
118258585
NCBI-ProteinID:
XP_050571777
LinkDB
All DBs
Position
28:complement(148405..156720)
Genome browser
AA seq
962 aa
AA seq
DB search
MGAPAAAGGPALGALLALLLLGAAGAARQGLQVIDLLLVSEARQMASITHKIRMELLTVN
DVFLLSTFRLPPKQGGTLFGLYSKKDNTRWLEVSVVGKINKVLVRYLREDNKLHSVNLQH
AHVADGQSHTVIVRLSGLRGDMLSVELYVDCKQVDSSVGLPELSEIPLAEVESIEVRTGQ
KAYQRMQGFVESMKLILGGSMSRVGALSECPFQGDESIHSAVTSALASILGEQTKALVTQ
LTLFNRILTDLREDIRDQVKEMSLIRNTIMECQVCGFHEHRSRCNPNPCFSGVDCMETYE
YPGYRCGPCPPGLEGNGTHCVDIDECAHANPCFPGSKCINTAPGFRCEPCPRGYRGNTVS
GVGADYAKASKQVCTDIDECNDGNNGGCDPNSICTNTPGSYKCGPCKSGFVGNQTSGCIP
QRSCSTPTSNPCDINGFCMFERNGEISCACNVGWAGNGNVCGEDTDLDGYPDEPLPCIDN
NKHCKQDNCRLTPNSGQEDADNDGIGDQCDDDADGDGIKNVEDNCRLFPNKDQQNSDTDS
FGDACDNCPNVPNNDQRDTDSNGEGDACDNDIDGDGIPNMLDNCPKVPNPLQTDRDEDSV
GDACDSCPEMSNPTQTDMDSDLVGDICDTNEDSDGDGHQDTKDNCAEIPNSSQLDSDNDG
LGDDCDNDDDNDGIPDYTPPGPDNCRLIPNPNQKDSDGNGVGDACEEDFDNDTVIDQLDV
CPESAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNG
VDFEGTFHVNTVTDDDYAGFIFSYQDSASFYVVMWKQTEQTYWQATPFRAVAEPGLQLKA
VKSSTGPGEHLRNALWHTGHTPEHVRLLWKDPRNVGWRDKTSYRWQLVHRPQVGYIRVRL
YEGPRLVADSGVIIDTTMRGGRLGVFCFSQENIIWSNLQYRCNDTIPADFEPFRRFLLEG
RE
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaccggcggccgcggggggcccggcgctcggcgcgctcctggcgctgctcctg
ctgggcgccgccggcgcggctcgccaggggctgcaagtcatcgacctgctcctggtgagc
gaggcccggcagatggccagcatcacgcacaaaatccggatggagctcctgacggtgaac
gacgttttcctcctctccaccttccgcctgccccccaagcagggggggaccctctttggc
ctctactccaaaaaggacaacacgaggtggctggaggtgtccgtggtggggaagatcaac
aaggtgctggtgcgctacctgcgggaagacaacaagctccactcggtcaacctgcagcac
gcgcacgtggcggacgggcagagccacacggtgatcgtgcgcctgagcgggctgcgtggg
gacatgctgagcgtggagctctacgtggactgcaagcaagtggactctagcgtggggctg
cccgagctgtccgagatccccctggcagaggtggagtcgatcgaggtgcgcacaggacag
aaggcctaccagaggatgcaggggttcgtggagtccatgaagctgattctgggaggctcc
atgagccgagtcggggccctgagcgagtgtccgttccagggagatgaatccattcacagc
gcagtgacaagcgcgctggcctccatcctgggcgagcagaccaaggcgctggtcacgcag
ctgaccctcttcaaccgcatcctgacagacctgcgagaagacattagggaccaggtgaag
gagatgtccctgatccgcaacaccatcatggagtgccaggtctgcggcttccatgagcac
cgttctcgctgcaaccccaacccctgcttcagcggcgtggactgcatggagacatacgag
taccctgggtaccgctgcgggccctgtccgccgggcctggagggcaacggcacacactgc
gtcgacatcgatgagtgcgctcatgccaacccctgcttccccggctcgaagtgcatcaac
acggcacctggcttccgctgtgagccctgtccccgtggctatcggggcaacaccgtctct
ggcgtgggggccgactatgcgaaggccagcaagcaggtttgcacagatattgatgaatgt
aacgatgggaacaatggtggctgcgaccccaactccatctgcaccaacacgccgggctcc
tacaaatgtggcccctgcaagtcagggtttgtggggaatcagacgtccggctgcatcccg
cagcggtcctgcagcactcccacctccaacccttgcgacatcaacggcttctgcatgttc
gagaggaacggtgaaatttcctgtgcgtgcaacgtgggctgggctggcaacggcaatgtg
tgtggggaagacacggacctcgacggctaccctgatgagcccctgccctgcatcgacaac
aacaagcactgcaagcaggacaactgccgcctgacgccgaattcagggcaggaggacgcc
gacaacgatggcatcggggaccagtgtgatgatgacgcagatggtgatggcatcaagaac
gtggaggacaactgccggctcttccccaacaaagaccagcagaattcggacaccgactcc
tttggggatgcctgcgacaactgccccaacgtgcccaataatgaccagcgggacacggac
agcaatggcgagggggacgcttgtgacaatgacatcgatggggacggaattcccaacatg
ctggataactgccccaaggtgcccaacccgctgcagacagaccgggacgaggacagcgtt
ggggatgcctgtgacagttgccctgaaatgagcaacccaactcagacagatatggacagt
gacctggtaggggacatctgtgacaccaacgaggacagtgatggggacgggcatcaggac
accaaggacaactgcgctgagatccccaacagctcccagctggactcagacaatgatggg
ctgggggacgactgtgacaatgatgatgataacgatggcatccctgactacacaccaccc
ggcccggataactgccgcctgatccccaaccccaaccagaaggattcggatgggaacggc
gtgggtgacgcgtgcgaggaggacttcgacaacgacacagtgatcgaccagctggacgtg
tgcccggagagcgccgaggtgacgctgaccgacttccgcgcctaccagaccgtcatcctg
gaccccgagggggatgcgcagattgatcccaactgggttgtcctcaaccagggcatggag
attgtgcagaccatgaacagcgacccaggcttggctgttggctacacagctttcaacggg
gtggactttgagggcaccttccacgtcaacaccgtcaccgacgatgactacgctggcttc
atcttcagctaccaggacagcgccagcttctacgtggtgatgtggaagcagacggagcag
acgtactggcaggccacccccttccgtgccgtggccgagccggggctgcagctcaaggcg
gtgaagtcctcgacgggccccggcgagcacctgcgcaacgcgctatggcacacgggccac
acgcccgagcatgtccgcctgctgtggaaggacccgcgcaacgtgggctggagggacaag
acatcgtaccgctggcagctggtgcacaggccccaggtgggctacatcagggtccggctg
tacgaaggcccgcggctggtggcggactcgggggtgatcatcgacaccaccatgcgcggg
gggcggctgggggtcttctgcttctcccaggagaacatcatctggtccaacctgcagtac
cgctgcaacgacacgatccccgcagacttcgagcccttccgccggttcctgctggagggc
cgcgagtga
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