Cygnus atratus (black swan): 118258639
Help
Entry
118258639 CDS
T09349
Symbol
ARHGEF11
Name
(RefSeq) rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118258639 (ARHGEF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118258639 (ARHGEF11)
Membrane trafficking [BR:
cata04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118258639 (ARHGEF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
RGS
SOS1_NGEF_PH
PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
118258639
NCBI-ProteinID:
XP_035423423
LinkDB
All DBs
Position
28:1230305..1255548
Genome browser
AA seq
1513 aa
AA seq
DB search
MSVRPPQAALDRLSSLSSLGDSSSERRSPGHRRQPSDSSETTGLVQRCVIIQKDQHGFGF
TVSGDRIVLVQSVRPGGAAMRAGVQEGDRIVKVNGMMVTNSSHLEVVKLIKSGAYVALTL
LGSPPPSVGLSNSQQDVSTPGAPRVVPACPPPPPPPPLPPPQRITGPKPLQDPEVQKHAT
QILRNMLRQEEAELQRFYEAYSRNPATVVEEQIEGARRRVSQLQLKILQETGGSVDSGRL
CGDSGLAAFRAAEGRLSLDSQDGDSGLESGTERFPSVSEMSLNRNSVLSDHGLDSPRTSP
VITSRFYQHHRRQGSDTPFAPTAEQGSERAGRPLIIGPEEDYDPGYFNNECDSLFQDLGK
LKSRPAHLGVFLRYIFSQADPSPLLFYLCADVCQQTAAKDSRVLGKEIWNIFLERNAPLR
VKVSEQLLAEIETRLRNGDDVRAALFEAQEMVMPEIQEQIQDYRTKRTMGLGSLYGENDL
LDLDGDPQKERQVAEKQLAQLGDILSKYEEDRSSPMAFALSTYMNHTGIRSREPRVASAS
EKAQALPDKDKWLPFFPKTKKLSSRVPQQSSSTKKDKDAMEDKKRNPILKYIGKPKISSQ
STFHVPLSPVEAVKPGNVRNIIQHFENNQHYESQEPGTQRLSTGSFPEDLLEADGSRAEV
KLGRSESLKGREEMKKSRKAENVPRSRSDVDMDAAAEATRLHQSASSSASSLSTRSLENP
TPPYTPKMGRRSIESPSLGFGVDPFLPHLLEDEQGQLSDLEPELDSQNWQHTVGREVLAS
LPQKEIDRQEVINELFATEGSHLRILRVLDLLFYQRMRKESLLSHDELALLFPNLPDVIE
VHNSLSESMKKLREEGPIIKEIGDLMLSRFDGLAKEEIQQVTADFCSYQSIALELIKTKQ
RKETRFQIFMQEAESNPQCRRLQLKDLIISEMQRLTKYPLLLENILKHTEAGTSEHDKLC
RARDQCRDILKYVNEAVKQAENRHRLEGYQKRLDATSLERTSNPLAAEFKSLDLTSRRMI
HEGPLTWRIGKDKTVDLHVLLLEDLLVLLQKQDEKLVLKCHSKTALGSSDNKQTFSPVLK
LNSVLIRSVATDKRALFIICTSELGPQIYELVALTSSEKNTWMEVLEEAVQSSTRNATFP
PKRRTPEPTRAAPSSLVLPDADVSPILSRGAGSAAEAEESSSADDNPVELLGKEKPPALP
EEPQSSEVEEEGEEEPAGAAGALPEPPVRLALPVPLSAEGLAEAALEDVENLRLLILRRL
LPGRDAEPEDDLTPTPSVSGGAQPWDSVLCSQESASQEVPPEPPAPPEEPKPRASWEETS
RTGPAAEEPGGYKVVRKARAQEGAQEATPPAGSSQSEPELQEGGGARVDGNYFYVSMPLG
PPKPAPPPSPPRGSPSQDPPSCLSTAEAPPEPPGPPRDVDLIFRTIEQLTLKLNRLKAVE
RAHRELLRSLGHGSSPDATPVGGSAPGTDGWPQRPPSPEGGSPLTLRSLQGPSANTPGCR
APLAEDPAHAADL
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaggccgccgcaggccgccctcgacaggttgagcagcctgtcttccctgggc
gattcgtcttcggagcggaggtctcccgggcaccgccgccagccctctgactcctccgaa
accacaggtctggtccagcgctgcgtcatcatccagaaggaccagcatggcttcggcttc
acggtcagcggggaccgcatcgtcctcgtccagtccgtgcggccaggaggagcggccatg
agagccggggtgcaggagggcgaccgcattgtcaaggtgaacggcatgatggtgaccaac
agctcccacctcgaggtggtcaagctgatcaagtctggcgcctacgtcgctctgaccctc
ctgggctcccccccgccgtcggtggggctctccaactcccagcaagacgtgagcacgccg
ggggctccccgcgtcgtccccgcttgccccccgccgcctccgcccccgccgctcccaccg
ccgcagcgcatcaccggccccaagcccctgcaggaccccgaggttcagaagcacgccacg
cagattctccgcaacatgctgcggcaggaggaggcagagctgcagcgcttctacgaggcg
tacagccgcaaccccgccaccgtggtggaggagcagatcgagggggcacgccggcgggtc
agccagctgcagctcaaaatcctccaggagaccggcggctccgtggattcggggcggctc
tgcggtgactccggcttggccgctttcagagcggcagaaggccgcctctcgctggactct
caggacggtgacagcggcttggagtcgggcacagagcggttcccctccgtcagcgagatg
tccctgaaccgcaactccgtcctctccgaccacggcctggacagcccgcggacctccccg
gtcatcacctcccgcttctaccagcaccaccgccgccagggctccgacacccccttcgcc
cccaccgccgagcagggatcggagcgcgcgggacgccccctcatcatcgggccggaggag
gattacgacccgggatacttcaacaacgagtgcgactccctcttccaggacctgggcaag
ctcaagtcgcggccggcacacctgggggtcttcctgcgctacatcttctcccaggccgat
cccagccccctgctcttctacttatgcgcagacgtgtgccagcagacggccgcaaaggat
tcacgggtcttgggaaaggaaatctggaacatcttcttggagaggaacgcgcctctccga
gtgaaagtgtcggagcagctcctggctgagatcgagactcgcctgcggaacggggacgat
gtccgagccgccctctttgaggctcaggagatggtgatgcccgagatccaggagcagatc
caggactacaggacgaagcgcaccatgggtctggggagcctgtacggggagaacgacctc
ctcgacctggacggggacccccagaaggagcggcaagtggccgagaagcagctggcccag
ctgggtgacatcctgtccaaatatgaagaggacaggagctcccccatggcctttgccctc
agcacgtacatgaaccacaccggcatccgcagccgggagccgcgcgtggccagcgccagc
gagaaggcgcaagccctcccggacaaggacaagtggctgcccttcttccccaagaccaag
aagctctcctctcgggtgccccaacagagcagcagcacgaagaaggacaaggatgccatg
gaagacaagaagcgcaaccccatcctcaagtacatcgggaagcccaaaatctcctcccag
agcacatttcatgtccctttgtcccctgtcgaagcagtcaaacccggcaatgtgaggaac
attatccagcactttgagaacaaccagcattacgagagccaggagcccggcacgcagcgc
ctctccaccggcagcttccccgaggacctgctggaggctgacggctcccgcgccgaggtc
aagctgggccggtcggagagcttgaaaggccgcgaggagatgaagaaatctcggaaagca
gaaaacgtgccccggtcccgcagcgacgtggacatggatgccgcagccgaggccaccagg
cttcaccagtcggcgtcgtcctccgcctccagcctgtccaccaggtcgctggaaaacccc
acgcccccctacacgcccaagatgggacgcaggagcatcgagtcgcccagcctgggcttc
ggcgttgaccccttcctgcctcacctcctggaggacgagcagggccagctctcggacctg
gagcccgagctggactcgcagaactggcagcacacggtcggccgggaggtgctggccagc
ctgccgcagaaggagatcgaccggcaggaggtgatcaacgagctctttgccacggaaggg
tctcacctccgcatcctccgggtcctcgacctcctcttctaccagcggatgaggaaggag
agcctgctgtcccacgacgagctggcgctgctcttccccaacctcccagacgtgatcgaa
gtccacaattccctctccgaatccatgaagaagctccgggaagaaggaccaatcatcaag
gaaatcggggatctcatgctgtctcggttcgacggcctggccaaggaggaaatccagcag
gtgactgcggacttctgctcgtaccagtccatcgccctggagctgatcaaaaccaagcag
cgcaaggagacccgtttccagatcttcatgcaggaagcagaaagcaacccgcagtgccgg
cgcctgcagctcaaggacttgatcatctccgaaatgcagcgcctgaccaagtacccgctg
ctgctggagaacatcctcaagcacaccgaggcgggcacctcggagcacgacaagctgtgc
cgagcccgggaccagtgccgggacatcctcaagtacgtgaacgaggccgtgaagcaggcg
gagaaccggcaccgcctggagggctaccagaaacgcctggacgccacctcgctggagagg
accagcaaccccctggctgccgagttcaagagcctggacctcacctcccggcgcatgatc
cacgaggggccgctcacctggcgcatcggcaaggacaagaccgtggacctgcacgtgctg
ctcctcgaggacctcctggtgctgctgcagaagcaggacgagaagctggtgctcaagtgc
cacagcaagacggcgctgggctcctcggacaacaagcagaccttcagccccgtcctcaag
ctcaactcggtgctcatccgctccgtggccacagataagcgagccctcttcatcatctgc
acgtcggagctgggcccccagatctacgagctggtggcgctgacgtcctccgagaaaaac
acgtggatggaggtgctggaggaggcagtgcagagctccaccaggaatgccaccttcccc
cccaagcgccggacgccggagcccacccgcgcggccccctccagcctggtgttgccggac
gccgacgtctcccccatcctgtcccgaggcgccggctccgcagcggaggcggaggagagc
tcctcagcggacgacaatcccgtcgagctgctgggcaaggagaagcccccggcgctgccc
gaggagccgcaaagcagcgaggtagaggaggaaggggaggaagagcccgcgggggcggcc
ggagccctcccggagccccccgtgcgcctggcgctgccggtgccgctctcggcggagggg
ctggccgaggcggccctggaggacgtggagaacctgcggctcctgatcctgcggaggctc
ctgcccggccgcgacgcggagcccgaggacgacctgacgcccacgccgtcggtcagcggg
ggcgcccagccgtgggactcggtgctctgcagccaggagtcggcctcccaggaggtgccg
cctgagcccccggcaccccccgaggaaccgaagccccgagcgagctgggaggagacgagc
cggacgggtccggcagcggaggagcccggcggctacaaggtcgtccggaaagcccgggct
caggagggtgcccaggaggccacgccccctgcaggcagcagccaatcagaacctgagctg
caggaaggaggcggagctcgtgtagatggcaactacttctacgtcagcatgcccctggga
ccccccaagcctgcgccgccccccagccccccccggggctccccctcccaggaccccccc
tcctgcctcagcaccgccgaggcccccccggagccccccggccccccccgcgacgtcgac
ctcatcttccgcaccatcgagcagctgacgctcaagctcaacaggctgaaggccgtggaa
agagcccaccgggagctgctgcgctccctggggcacggctcctcgcccgacgccaccccc
gtggggggctcggccccggggacggacgggtggccccagcggccccccagccccgagggc
ggcagccccctgaccctgcggagcctgcagggccccagcgccaacacgccgggctgccga
gcccccctggccgaggaccccgctcacgccgccgacctttag
DBGET
integrated database retrieval system
