Cygnus atratus (black swan): 118258701
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Entry
118258701 CDS
T09349
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118258701 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118258701 (SKIC3)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
118258701 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_12
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_15
ARM_TT21_C
Fis1_TPR_C
TPR-S
BTAD
TolB_N
HAT_Syf1_M
THOC7
TPR_5
Motif
Other DBs
NCBI-GeneID:
118258701
NCBI-ProteinID:
XP_035423536
LinkDB
All DBs
Position
Z:complement(83235690..83285700)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSSQTDVKGDLADVYKKLLELYGSGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLITIKREEGAEKADLHQLWKRMIQLLADGAQNQDNKTLQ
MLLNAFEEAVNSADPVPSEDHQNLYKDFIQCLSKFPHETTKLEKACDDMMALYPTVSYPL
EVLCLHFIESGVVSEEALHYFSKLLEMDSSSGPGIIGFGIKCLQEKKYEEAVKSLTEGLK
KASQCLGAWHYLAEAQIKIHKHRNAVLSCNQALKNLGSPESPTLQQKKDRILQLKAEALI
KIGDADAAEEAINALEQIVGASSDPVVLAFRGRAYLNKGLVDQASKISQELLLSHPDLAE
AHALEGFIHYSQKKYEQAERSFQNAIERRAGTAEYHQYLGLTYWFMSDETKKDKGKTLTH
FLKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTAAVDLSVEL
GDMDTALSILNEVTGKANAGTVKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCW
ESLGEAYFGRGSYATALKAFKKASELNPELVYSIYRAAAVEQILGKYENAIATYQEILEK
TEEYVPALKGLGECYLMLAKSALDKYLDRKAVDYIEQALEFFTRATKHRPDISSLWKLLG
DTCTSVHVISPAKVNVQVLGLLLGRNEGKQMLKKNELLRLGGRCYGRALKLMPLPNIWCD
LGINYYRQAEHLTAVDADMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIG
NYALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAFKVAQSLEPSYLLCWIGQ
ALIAETVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKGNRNTEVYLYNIVQMNA
IPAAQVVMTKYTERNPDDASAFTMLGYLNEYMDLKRQAKDAYERAASLLKNSEDTEKYNI
AMQNYGRSLCAIGECDKAIEVYTSIPLTDFDGIVGIALAYFKKGLLQESINAYERALSVA
ESEQDKAHILTALAIIEYKRNKVDAAKTLLFKCSLKEPSTESLKVLCTLGLVKQDVTLAT
AALKELLKHEKGKDGIYERCLIASVVYALQGRNVAVQREVSKAIHSNPDNPALWSLLSRL
VPLYTLQKAKGGAVAGNIAHALDSSYGKEVLLNVAVNQLAAGCHMLKDQRENPLKNIQKA
IHLCPDNPAAWAVLMAACHAENTVVCLNNTQPKRTGLEMTLVSTISAKTGENNLPRNYIQ
TLEDWSLCQAITSLEETGRISEAEALCTKGLKSCPEHPALFLLLRQVQCKQLLQTHKELP
DTILEELRKTVMTSSSVAAWQWLAKVYQSQGMMVGAEMCYRKSLQLASQQGSWSGKLSSL
LRLAMLALEICMANVPNEHWPSLVQEATTEALKLSSCPLASLLQALLQYNRKMGARETRR
MLERVVYQPGNPESIVSVARWYLLQHLYAKDDYELIDVLVENAKANGDVRALELNKKLSS
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaagcagcattaaagagtgctagagaagccataagaaataaa
gaatataaggaagccttaaaacattgcaaggcagtcttaaagcaagaaaaaaataactac
aatgcctgggtatttattggcctggcagctgctgagctagaacagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagctgctggcgtggcagggattg
gcaaatttatatgagaaatccagccaaacagatgtcaaaggagacttagcagatgtttat
aaaaagctcttggaactctatggaagtggagacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaactatatcatcaagaaaagaaatatttagaggtggctgaaacatggcag
aaactaataactataaaacgggaggaaggtgcagaaaaagcagaccttcatcagctttgg
aaaaggatgatccagttattggcagacggtgcacagaaccaggacaataagactctgcaa
atgcttttgaatgcatttgaggaggcagtgaactctgctgaccctgttcccagtgaagac
caccaaaatctttacaaagactttattcagtgcctgtcaaagtttcctcatgaaacaact
aagttggaaaaggcctgtgatgacatgatggctttatatcctactgtgagctatcctttg
gaagtactttgcttgcactttattgagtcaggtgttgtgtcagaagaggccctgcactat
ttttctaagcttttggagatggactcaagtagtggtccaggcatcattggttttggtata
aaatgcctccaagaaaagaaatatgaggaggctgttaagagtcttactgaaggtttgaag
aaggctagccagtgtctgggagcatggcattatttggcagaggcacagataaagattcac
aagcacaggaatgctgttctgtcctgtaatcaagctctcaagaatcttggaagtcctgag
agtcctactcttcagcagaagaaggaccgtattcttcagttgaaagcagaggctttgatt
aaaataggtgatgccgatgctgcagaagaagccattaatgcacttgagcagattgtgggc
gcaagcagcgatccagtggttttagctttcagaggtcgggcttatctaaacaaaggttta
gtggatcaagcttcaaagatttcacaagagcttctgttgtcacaccctgatctggctgag
gcccatgctcttgagggtttcatccattattctcaaaagaagtatgaacaggcagaaaga
agttttcaaaacgccattgaaagaagggctggaactgcagaatatcatcagtacctgggg
ctcacctattggttcatgagtgatgagacaaaaaaagacaaaggaaaaacactcactcac
ttcttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaac
tactacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggctttt
gaactggatggaactgatgaagagtctggaacagcagctgtagacttaagtgtggaactt
ggagacatggataccgctctgtcaatcttgaatgaagtaactggaaaagcaaatgctggt
acagtaaaatgggcctggcttcatcgtggactttactacctcagaactggtcagccgtca
caagcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgg
gagtctctaggggaggcttactttggcagaggtagctatgcaacggctctaaaagccttc
aagaaggccagtgaactgaacccagagcttgtatacagcatttacagagctgcagcagtt
gagcaaattctaggcaaatatgaaaatgctatagctacctatcaagaaatcttagagaag
actgaagagtatgtgcctgcgttgaaaggacttggtgagtgctatctcatgctggcaaaa
tcagcccttgataagtatcttgataggaaggctgtggattacatagagcaggctcttgaa
ttttttacaagggcaacaaagcaccgtcctgatatatcttccctttggaaactgcttgga
gatacctgtactagtgtgcatgttatttcaccagccaaagtgaatgttcaggttctagga
ttgcttctgggtagaaacgaaggcaaacagatgctgaagaaaaatgagctgctcagactg
ggaggaaggtgttacggcagagctttaaaattgatgcctttgcctaacatatggtgtgat
cttggaataaattattatcgacaagcagagcacctcacagcagtggatgctgacatgaat
gagatcagtgaattgctagagaaatctttacagtgtctcaaaaaagctgtgaggcttgac
agcaaaaatcatctttattggaatgcacttggtgtagttgcttcctgtagtgctattggg
aattatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgtt
gttgcctggaccaacttgggggttttgtatctagcaactggaaacattgagcaagctcat
gaagccttcaaggtagcccagtctctggagccctcttacctactgtgttggattgggcag
gctcttattgcggaaacggttggcagctatgatactatggatctcttcaggcatacaact
gaacttagtatgcatactgagggagcaaaaggctatgcccactgggtttgttcaacgctg
caggataaaggcaacagaaatactgaggtatatctgtacaacattgttcaaatgaatgct
attccagcagctcaggtggtcatgaccaaatatacagaaagaaatccagatgatgcatct
gctttcacaatgcttggttacttgaatgagtatatggatctaaaaaggcaggcaaaagat
gcttatgagagggccgcttcattactgaaaaactctgaggatactgagaaatataatata
gctatgcaaaactatggcagatcactgtgtgccattggtgaatgtgataaagccattgag
gtttatacatcaatacctctaactgattttgatggcattgtggggatagcattagcctac
ttcaagaaaggactcttacaagaaagtattaacgcctatgagagagcattgtctgttgcc
gagtctgaacaagataaagcacatatcctgactgccttggcaataatagagtataagcgg
aacaaagtggatgctgcaaagacactactgtttaaatgctcattaaaggaacctagtacg
gaaagtctgaaggttttgtgcacgctaggactggtaaagcaggacgttacacttgcgaca
gcagccttaaaagaattactgaagcacgagaaaggaaaagatgggatttatgagaggtgc
cttattgcatctgttgtttatgcattacaaggtagaaatgtggcagtccagagagaagtc
tcaaaagcaatacatagtaaccctgataatcctgctctttggtctcttttgtctcgacta
gttccactgtatacgttacagaaggcaaaaggtggagccgtggcaggaaacattgcacat
gcacttgattcaagctatgggaaggaagtcctactaaatgttgcagttaatcagctggca
gcaggatgtcacatgttaaaagatcagagggaaaatcctctgaaaaatattcagaaggca
atccacctctgtccagataaccctgctgcatgggcagtgctaatggcagcctgtcatgct
gagaacactgttgtctgtctaaacaacactcagccaaagcgaacaggtctagagatgaca
cttgtatctacaatttcagccaaaactggagaaaataaccttccacgtaattatatccag
actcttgaagattggtctctatgtcaagctatcaccagtctagaggagactggtagaatc
tcagaagctgaagcactttgtaccaagggtttaaagagctgtcctgagcacccagctcta
tttttgcttttgagacaagttcagtgtaagcagctgttgcaaactcacaaagagcttcca
gataccatcctggaggagcttcgcaaaacagtcatgaccagttcttcagttgcagcctgg
caatggctggcaaaagtatatcagtcccaaggaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcgtcacagcagggcagctggagtgggaagttatccagtctg
ctcaggctggctatgctagcactggaaatctgcatggctaatgtcccaaatgagcattgg
ccatccttggttcaagaggctacaactgaggctttgaaactctcatcctgccccttggca
tctctcctgcaagcactactgcagtataatcgcaaaatgggagcaagggagactcgtcga
atgttggaaagagtggtctaccaaccagggaatccagaatccatagtgtcagtggcacgc
tggtacctcctgcagcatctgtatgccaaagatgattatgaattaatagatgtacttgta
gaaaatgccaaagctaatggagatgttagagctctggaactaaacaagaaattgtcatca
agtgcctag
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integrated database retrieval system
