Cygnus atratus (black swan): 118258786
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Entry
118258786 CDS
T09349
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cata03400
]
118258786 (HDGFL2)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118258786 (HDGFL2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
118258786
NCBI-ProteinID:
XP_035423685
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Position
26:complement(3121927..3132697)
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AA seq
642 aa
AA seq
DB search
MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKTNKRKGFNEGLWEIQNNPHASYSAPPPASSSDSDVPENDPMGGSDAGDDE
DDPAMAAVTAEKMESDEDSDRGSDHSGLKRKSLAMKMPVAKRPRKSSSDLDQGSPSLTEE
ENSETSSESEKNSDQDFTPEKKPVARAPRRMPAGGRKKKKVESGSDSDSKVDSDSEMGNA
TVDMTKSDSNSDSDSDVSVKKPQRGRKPAEKPPPKPRGRKPKPERVPTSSSSDSDSDSDV
DRISEWKRRDEERRRELEEKRKREQEEEIRRLREQEKEEKEKRKEKAEKGEEAHSDSDSS
ADDEVAKKGRKGRAKAPSSSDSDLEVEKEVKKPAKKQPSELSRKPNQKEKRGRAEEKPRN
KPLKVERGRKKSELIPERRMEKKKEPTVEEKLQKLHSEIKFALKVDNPDIKRCLNALEEL
GTLQVTSHILQKHTDVVATLKKIRRYKANKEVMEKAAEVYTRLKSRVLGPKMEAIQKANK
AGPEKDKGDVDKSQEKLAGGETRNEKGEEETNADLSGPVNGESLSQKAEGTEEKERDKSQ
GPGAGELEASAEEAHNNVQNYPKAERERARGESESVDDAEES
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcttcaagcccggggacctcgtcttcgccaagatgaagggctacccgcac
tggcccgcccggatcgatgacatcgcggacggcgccgtgaaacccccgccgaacaagtac
cccatcttcttcttcggcactcacgagaccgccttcttgggccccaaagacctgttcccc
tatgaaaagtataaggacaaatatgggaaaacaaacaagagaaaaggcttcaacgaggga
ttgtgggaaatccagaacaaccctcacgccagttacagtgcccctccgcccgcgagctcc
tctgacagcgacgttcccgagaacgaccccatggggggaagcgacgcaggggacgacgag
gacgaccccgccatggctgcggtcaccgcagagaaaatggaaagcgacgaggactcggat
cgaggcagcgaccacagcgggctcaagcgaaaatcgttggcgatgaaaatgccggtggca
aaacggcctcggaagtcttccagcgacctggatcagggcagtccctccctgacagaagag
gagaactcagaaacgtcctctgagtcggaaaaaaacagcgaccaggatttcactcccgag
aagaagccagtggccagggctccccggaggatgcctgcagggggcaggaagaagaagaaa
gtggagtctggctccgattcggattccaaagtggactcggactcggaaatgggaaacgca
accgtggacatgaccaagtcggactccaactccgattcggactccgacgtgtctgtgaaa
aagcctcagcggggcaggaagccagctgagaagccgcctcccaagccccgtggcaggaaa
ccgaagcccgagcgtgtcccgaccagctccagcagtgacagcgacagcgacagcgacgtg
gaccgcatcagcgagtggaagagacgggacgaagagcggcggcgggagctggaagagaag
aggaagagggagcaggaggaggagatccgtcggctgcgggagcaggagaaggaggagaag
gagaagaggaaggagaaagcagagaagggcgaggaggcgcactcggacagcgacagcagc
gcggatgacgaagtagccaaaaagggccggaaaggccgggccaaggctccgtcctcctca
gactccgatctggaggtggagaaggaggtaaagaagccggcgaagaagcagccctcggag
ttgtcaaggaaaccgaatcagaaggagaagaggggccgagcggaggagaaaccgcggaac
aaacctctgaaagtggaacgaggccgcaagaagtctgagctgatccccgaaaggaggatg
gagaagaaaaaggagcccaccgtggaagagaaacttcagaaacttcacagcgagatcaag
tttgccctgaaggtggacaacccggacatcaagcggtgcctgaacgcgctggaggagctg
ggcacgctccaggtcacctcacacatcctccagaagcacacggacgtggtggctactctg
aaaaagatccgtcgctataaagcaaacaaagaagtgatggagaaagccgccgaagtttac
acccggttgaagtcgcgtgtcctgggaccaaagatggaggcaatccagaaagccaacaaa
gccggtccggagaaggacaagggggatgtggacaagagccaggagaagctggcgggaggg
gagacgcggaatgagaagggggaagaggagacaaacgccgacctgtcaggtcctgtgaac
ggtgaatccctatcccaaaaagcggagggcacagaggagaaggagcgagacaaaagccaa
gggccgggagccggcgagctggaggcatctgccgaggaggcccacaacaacgtgcagaac
tatcccaaggccgagcgcgagagggctcgcggggagtcagagtctgtggacgacgcggag
gagagctga
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