KEGG   Cygnus atratus (black swan): 118258835
Entry
118258835         CDS       T09349                                 
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
  KO
K11858  ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12]
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cata01002]
    118258835 (USP48)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cata04121]
    118258835 (USP48)
Enzymes [BR:cata01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     118258835 (USP48)
Peptidases and inhibitors [BR:cata01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   118258835 (USP48)
Ubiquitin system [BR:cata04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    118258835 (USP48)
SSDB
Motif
Pfam: UCH UCH_1 DUSP ubiquitin Actin_micro
Other DBs
NCBI-GeneID: 118258835
NCBI-ProteinID: XP_035423798
LinkDB
Position
21:complement(7748678..7780392)
AA seq 1036 aa
MAPRLQLEKAAWRWIETVPPEAVAQEHIEAAYRVGLEPCQRGACRRNCRGNPNCLVGIGE
HVWLGEIDENSFHNIDDPNCERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLC
PSTCSERTAGEGIPKDKDYEPQTICEHLQYLFALLQNSKRRYIDPSGFVKALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELE
LNIQGHKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFV
FDRQTGHKKKLNTYIGFSELLDMEPFMEQKSGVYVYELSAVLIHRGVSAYSGHYIAHVKD
PQTGEWYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRL
QTREKSLTVEVPAFLQELVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPA
EAGSPYDFISLEWLQKWLDESTPPKPIDNTACLCSHGKLHPDKICIMKRISEYVADFFYR
RYGGGPRLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKITVKGNDGFWVGKASLR
SWRQLALEQLNEQDEDAEHSNGKMNGNAQNKDESNEEKREEEEELNFNEDIVCPHGDLCI
SENERRVVSKEAWKKLKQYFPKAPEFPNNKECCSQCKILEREGEENEALHKMMASEQKTS
LQNLFHDKCRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVSSVGNSALLCPHG
GLMFTYASMTKEDSKLIALIWPSEWERIQKLFVVDHVIKITRTQAAGADPESALYTSEPK
LCPECREGLLCQQQRDLREYTQATIYIHKVVDNKKVMKDAAPELNVSSSEAEEEREENKP
EGEQDPDFNQTNGGAKRQKISHQNYITYQKQGIRRSTRHRKVRGEKALLVSANQTLKELK
IQIMHAFSVAPFDQNLSIDGKILSDDTATLGSLGVIPESVILLKADEPIADYAAMDDVMQ
VCMPEEGFKGTGLLGH
NT seq 3111 nt   +upstreamnt  +downstreamnt
atggcgccgcggctgcagctggagaaggcggcctggcgctggatagagacggtgccgccc
gaggcggtggcgcaggagcacatcgaggcggcctaccgcgtcgggctggagccctgccag
cgcggcgcctgccggaggaactgccgggggaaccccaactgcctggtgggcatcggcgag
cacgtctggctgggcgagatcgacgagaacagcttccacaacatcgacgaccccaactgc
gagcgccgcaagaagaacgcgttcgtgggcttaacgaacctcggcgccacgtgctacgtg
aacactttcttgcagatgtggtttctcaacttggagctccggcaagccctctacttgtgt
cccagcacctgcagcgagcgcacggccggagagggcatcccaaaagacaaagactatgag
cctcaaaccatttgtgaacatctccagtacttgttcgccttgctgcagaacagcaaaagg
cgatacatcgatccctctgggttcgtcaaagcgctgggtttggatacaggacagcagcag
gatgcccaggaattttcaaagctgttcatgtcactgctggaagatactttatccaaacaa
aaaaatccagatgttcgaaacatcgtacaaaagcagttctgtggagagtacgcgtatgtc
acagtctgcaaccagtgtggcagggagtccaaacttgtgtctaaattttatgagctggag
ttaaacatccaagggcacaagcagttaacagactgtataacagagtttctcaaggaagaa
aaattagaaggggacaatcgttatttttgtgaaacttgtcagagtaagcagaatgccaca
aggaagatcaggctgctaagtcttccgtgcacactcaacctgcagctgatgcgttttgtg
ttcgacaggcaaaccggccataagaaaaagctgaacacctacatcggcttctctgagctg
cttgacatggaaccttttatggagcaaaagagtggtgtctatgtatatgaactcagtgct
gtcctcatacacagaggtgtgagcgcgtactctgggcactacatcgcccacgtgaaggat
ccgcagacgggcgagtggtacaagtttaatgacgaagacatagaaaagatggaggggaag
aaactgcagttggggattgaggaagatctagcggagccttctaaatctcagactcgcaaa
cctaagtgtgggaaagggactcactgctcacgcaacgcctacatgctggtgtacaggctg
cagacccgggagaagtccctgacagtcgaagtaccagctttcctgcaggagctggtggag
cgtgataactgcaagtttgaggagtggtgcaacgaaatggccgagatgcgcaaacagagt
gtggccagaggcaaaatcaagcatgaagaggtgaaggagctctaccaaaggttacctgct
gaagctggttccccatacgacttcatctctcttgaatggctgcagaaatggctggatgag
tctactcctccgaaacctatagataacacagcctgcctgtgctcgcatgggaaactccat
cctgacaaaatctgtattatgaagaggatatcagagtacgtggctgacttcttctacagg
agatatggaggaggaccccggctgaatgtcaaagcactttgcaaggactgcgtggtagaa
aggtgccggatcctgcgactgaagaaccaattaaacgaagactacaaaaccgttacgaac
ctgctgaagataacagtaaaggggaatgacgggttttgggttggaaaggcgtccttgcgg
agctggcgtcagttggctctggagcaattaaatgagcaagacgaagacgcagagcacagt
aacggaaaaatgaatggaaatgcacaaaacaaagatgaatcaaatgaagagaagagagag
gaggaagaagagttaaattttaatgaagacattgtttgcccacatggtgacctgtgcata
tctgaaaacgaaaggagggtggtttcgaaggaagcctggaagaaactcaagcaatacttt
ccaaaggcccctgaattcccaaataacaaagagtgctgttcccagtgcaagattttggag
cgtgaaggagaagaaaatgaagctctgcataagatgatggctagcgagcagaagacctcc
ctccagaacctgtttcacgataaatgcaggccttgcctgggcagctggcctcaggagaca
gatgagctgtatattgtttcacagttctttgtagaagaatggaggaaatttgtcaggaga
ccgacgcgatgcagccctgtgtcctcggtaggaaacagcgctcttctctgcccccatggg
ggcctcatgttcacctatgcttccatgaccaaagaagactctaaacttatagctctaata
tggcccagcgagtgggagaggattcaaaaactgttcgtcgtggatcatgtcatcaaaatc
acccgaacacaagctgctggggcagaccccgagagcgcactttacacctctgagcccaaa
ctctgtccagaatgcagagaagggctgttatgccaacagcagcgggacttgcgtgagtac
acccaagcaactatctacatccataaagtggtggataataaaaaggtaatgaaggacgct
gctccagagctgaacgtgagcagctcagaagctgaagaggaaagggaggaaaacaagcca
gagggggagcaagacccagattttaaccagaccaatggtggtgcgaagcgccagaagatc
tcgcaccagaactacatcacttaccaaaagcaaggcatcaggcggagcacccggcaccga
aaagtccgaggggaaaaagcactgcttgtttctgctaatcagacgctgaaagagctgaaa
atacagatcatgcatgcattttcagttgctcccttcgaccagaatttgtcgatcgacggg
aagatactaagtgatgacaccgcaacgctcggcagcctgggagtcatccccgagtctgtc
attttattaaaggctgatgaaccaattgcagattacgcagcgatggatgacgttatgcaa
gtttgtatgcctgaagaaggatttaaagggactggtttacttggacactga

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