Cygnus atratus (black swan): 118258835
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Entry
118258835 CDS
T09349
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118258835 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118258835 (USP48)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118258835 (USP48)
Peptidases and inhibitors [BR:
cata01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118258835 (USP48)
Ubiquitin system [BR:
cata04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118258835 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Actin_micro
Motif
Other DBs
NCBI-GeneID:
118258835
NCBI-ProteinID:
XP_035423798
LinkDB
All DBs
Position
21:complement(7748678..7780392)
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AA seq
1036 aa
AA seq
DB search
MAPRLQLEKAAWRWIETVPPEAVAQEHIEAAYRVGLEPCQRGACRRNCRGNPNCLVGIGE
HVWLGEIDENSFHNIDDPNCERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLC
PSTCSERTAGEGIPKDKDYEPQTICEHLQYLFALLQNSKRRYIDPSGFVKALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELE
LNIQGHKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFV
FDRQTGHKKKLNTYIGFSELLDMEPFMEQKSGVYVYELSAVLIHRGVSAYSGHYIAHVKD
PQTGEWYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRL
QTREKSLTVEVPAFLQELVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPA
EAGSPYDFISLEWLQKWLDESTPPKPIDNTACLCSHGKLHPDKICIMKRISEYVADFFYR
RYGGGPRLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKITVKGNDGFWVGKASLR
SWRQLALEQLNEQDEDAEHSNGKMNGNAQNKDESNEEKREEEEELNFNEDIVCPHGDLCI
SENERRVVSKEAWKKLKQYFPKAPEFPNNKECCSQCKILEREGEENEALHKMMASEQKTS
LQNLFHDKCRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVSSVGNSALLCPHG
GLMFTYASMTKEDSKLIALIWPSEWERIQKLFVVDHVIKITRTQAAGADPESALYTSEPK
LCPECREGLLCQQQRDLREYTQATIYIHKVVDNKKVMKDAAPELNVSSSEAEEEREENKP
EGEQDPDFNQTNGGAKRQKISHQNYITYQKQGIRRSTRHRKVRGEKALLVSANQTLKELK
IQIMHAFSVAPFDQNLSIDGKILSDDTATLGSLGVIPESVILLKADEPIADYAAMDDVMQ
VCMPEEGFKGTGLLGH
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcggctgcagctggagaaggcggcctggcgctggatagagacggtgccgccc
gaggcggtggcgcaggagcacatcgaggcggcctaccgcgtcgggctggagccctgccag
cgcggcgcctgccggaggaactgccgggggaaccccaactgcctggtgggcatcggcgag
cacgtctggctgggcgagatcgacgagaacagcttccacaacatcgacgaccccaactgc
gagcgccgcaagaagaacgcgttcgtgggcttaacgaacctcggcgccacgtgctacgtg
aacactttcttgcagatgtggtttctcaacttggagctccggcaagccctctacttgtgt
cccagcacctgcagcgagcgcacggccggagagggcatcccaaaagacaaagactatgag
cctcaaaccatttgtgaacatctccagtacttgttcgccttgctgcagaacagcaaaagg
cgatacatcgatccctctgggttcgtcaaagcgctgggtttggatacaggacagcagcag
gatgcccaggaattttcaaagctgttcatgtcactgctggaagatactttatccaaacaa
aaaaatccagatgttcgaaacatcgtacaaaagcagttctgtggagagtacgcgtatgtc
acagtctgcaaccagtgtggcagggagtccaaacttgtgtctaaattttatgagctggag
ttaaacatccaagggcacaagcagttaacagactgtataacagagtttctcaaggaagaa
aaattagaaggggacaatcgttatttttgtgaaacttgtcagagtaagcagaatgccaca
aggaagatcaggctgctaagtcttccgtgcacactcaacctgcagctgatgcgttttgtg
ttcgacaggcaaaccggccataagaaaaagctgaacacctacatcggcttctctgagctg
cttgacatggaaccttttatggagcaaaagagtggtgtctatgtatatgaactcagtgct
gtcctcatacacagaggtgtgagcgcgtactctgggcactacatcgcccacgtgaaggat
ccgcagacgggcgagtggtacaagtttaatgacgaagacatagaaaagatggaggggaag
aaactgcagttggggattgaggaagatctagcggagccttctaaatctcagactcgcaaa
cctaagtgtgggaaagggactcactgctcacgcaacgcctacatgctggtgtacaggctg
cagacccgggagaagtccctgacagtcgaagtaccagctttcctgcaggagctggtggag
cgtgataactgcaagtttgaggagtggtgcaacgaaatggccgagatgcgcaaacagagt
gtggccagaggcaaaatcaagcatgaagaggtgaaggagctctaccaaaggttacctgct
gaagctggttccccatacgacttcatctctcttgaatggctgcagaaatggctggatgag
tctactcctccgaaacctatagataacacagcctgcctgtgctcgcatgggaaactccat
cctgacaaaatctgtattatgaagaggatatcagagtacgtggctgacttcttctacagg
agatatggaggaggaccccggctgaatgtcaaagcactttgcaaggactgcgtggtagaa
aggtgccggatcctgcgactgaagaaccaattaaacgaagactacaaaaccgttacgaac
ctgctgaagataacagtaaaggggaatgacgggttttgggttggaaaggcgtccttgcgg
agctggcgtcagttggctctggagcaattaaatgagcaagacgaagacgcagagcacagt
aacggaaaaatgaatggaaatgcacaaaacaaagatgaatcaaatgaagagaagagagag
gaggaagaagagttaaattttaatgaagacattgtttgcccacatggtgacctgtgcata
tctgaaaacgaaaggagggtggtttcgaaggaagcctggaagaaactcaagcaatacttt
ccaaaggcccctgaattcccaaataacaaagagtgctgttcccagtgcaagattttggag
cgtgaaggagaagaaaatgaagctctgcataagatgatggctagcgagcagaagacctcc
ctccagaacctgtttcacgataaatgcaggccttgcctgggcagctggcctcaggagaca
gatgagctgtatattgtttcacagttctttgtagaagaatggaggaaatttgtcaggaga
ccgacgcgatgcagccctgtgtcctcggtaggaaacagcgctcttctctgcccccatggg
ggcctcatgttcacctatgcttccatgaccaaagaagactctaaacttatagctctaata
tggcccagcgagtgggagaggattcaaaaactgttcgtcgtggatcatgtcatcaaaatc
acccgaacacaagctgctggggcagaccccgagagcgcactttacacctctgagcccaaa
ctctgtccagaatgcagagaagggctgttatgccaacagcagcgggacttgcgtgagtac
acccaagcaactatctacatccataaagtggtggataataaaaaggtaatgaaggacgct
gctccagagctgaacgtgagcagctcagaagctgaagaggaaagggaggaaaacaagcca
gagggggagcaagacccagattttaaccagaccaatggtggtgcgaagcgccagaagatc
tcgcaccagaactacatcacttaccaaaagcaaggcatcaggcggagcacccggcaccga
aaagtccgaggggaaaaagcactgcttgtttctgctaatcagacgctgaaagagctgaaa
atacagatcatgcatgcattttcagttgctcccttcgaccagaatttgtcgatcgacggg
aagatactaagtgatgacaccgcaacgctcggcagcctgggagtcatccccgagtctgtc
attttattaaaggctgatgaaccaattgcagattacgcagcgatggatgacgttatgcaa
gtttgtatgcctgaagaaggatttaaagggactggtttacttggacactga
DBGET
integrated database retrieval system