Cygnus atratus (black swan): 118258887
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Entry
118258887 CDS
T09349
Symbol
ITGB3
Name
(RefSeq) integrin beta-3 isoform X1
KO
K06493
integrin beta 3
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03266
Virion - Herpesvirus
cata04081
Hormone signaling
cata04145
Phagosome
cata04148
Efferocytosis
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
cata04517
IgSF CAM signaling
cata04518
Integrin signaling
cata04810
Regulation of actin cytoskeleton
cata04820
Cytoskeleton in muscle cells
cata05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
118258887 (ITGB3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
118258887 (ITGB3)
04512 ECM-receptor interaction
118258887 (ITGB3)
04517 IgSF CAM signaling
118258887 (ITGB3)
04518 Integrin signaling
118258887 (ITGB3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118258887 (ITGB3)
04148 Efferocytosis
118258887 (ITGB3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118258887 (ITGB3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118258887 (ITGB3)
04810 Regulation of actin cytoskeleton
118258887 (ITGB3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118258887 (ITGB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118258887 (ITGB3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118258887 (ITGB3)
04515 Cell adhesion molecules [BR:
cata04515
]
118258887 (ITGB3)
04090 CD molecules [BR:
cata04090
]
118258887 (ITGB3)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118258887 (ITGB3)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118258887 (ITGB3)
Cell adhesion molecules [BR:
cata04515
]
Integrins
Integrin beta subunits
118258887 (ITGB3)
CD molecules [BR:
cata04090
]
Proteins
118258887 (ITGB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
vWA_SIBA-E
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
118258887
NCBI-ProteinID:
XP_035423885
LinkDB
All DBs
Position
25:complement(3897055..3916639)
Genome browser
AA seq
781 aa
AA seq
DB search
MGKLHVALGILVLCAAGSWGGNICTTRGVNSCKQCLAVSPLCAWCSAKTMAQSSPRCDLH
ANLLQNGCRQDLIEFPTSSVTVLEDRPLSDKGSGGSTTTQMRPQRIELKLRPDDSQIFQV
QVRQVEDYPVDIYYLMDLSNSMKDDLRNIQNLGTTLASEMRKLTSNLRIGFGAFVDKPIS
PYMYISPPEAITNPCYETEETCLPMFGYKHVLSLTDEVMRFNEEVRKQSVSRNRDAPEGG
FDAIIQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDAQCHIDKDNFYS
ASTTLDYPSLGLMTEKLSQKNINLIFAVTDTVVGLYQNYSELIPGTTVGTLSGDSSNVLQ
LIVDSYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAK
VRGCPQERQKSFTIKPVGFKDSLVVVVNFNCSCSCESQAETNSSFCSGGNGSLECGVCRC
NPGRLGSLCECSEEEYNPSQQDNCSPRPGQPHCSQRGECICGQCVCHSSDFGKVTGKYCE
CDDFSCVRFKGQMCSGHGKCSCGDCLCDSDWTGDYCNCTTRTDTCMSSNGLVCSGHGSCV
CGKCDCTQPGSYGDTCEKCPTCPDACTIKKDCVECKKFERGELVKQQSCSRLCRDEIETV
QELGDRGKDAVNCTYKDENDCVVRFQYFEDSSGKSILYVIEEPDCPKGPDILVVLLSVTG
AILLIGLAALLIWKLLITIHDRREFARFEEEKARAKWDTGNNPLYKEATSTFTNITYRGN
M
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctccacgtcgcccttggcatcctcgtgctctgcgctgctggcagctggggg
ggtaacatctgcaccactcgaggggtgaactcctgcaagcagtgcctggccgtgagcccc
ctctgcgcctggtgctccgcgaagaccatggcacagtcgtccccacgctgcgacctgcat
gccaacctcctgcagaatggctgcaggcaggacttaatcgagttccccaccagcagcgtc
accgtcctggaggaccgaccgctcagtgacaagggctcagggggctccaccaccacccag
atgagaccccagagaatagagctgaagctgcggccggatgactcccagatcttccaagtc
caagtgcgtcaagtggaagactatcctgtggacatctactacctgatggacctgtccaac
tccatgaaggacgatctgaggaacatccagaatctgggcaccacgctggccagcgagatg
cgcaagctcaccagcaatctgcgcatcggttttggggcctttgtggacaagcccatttcc
ccctacatgtatatctctcctccagaagccatcacaaacccttgctatgagactgaggaa
acgtgcttacccatgtttggctacaagcacgtcctgtcactcacagacgaggtgatgcgc
ttcaacgaggaggtgcgcaagcagagcgtctcacggaaccgtgacgcacctgagggtggc
ttcgatgccatcatccaggccaccgtgtgcgatgagaagatcggctggaggaacgacgct
tcccacctgctcgtcttcaccacggatgccaagacccacattgccctggacgggaggctg
gctggcattgtgcagcccaacgacgcccagtgccacattgacaaggacaacttctactca
gcctccaccacgctggactatccctctctgggcctgatgactgagaaactctcgcagaag
aacatcaacttgatcttcgctgtgacggacacagttgttggactgtaccagaactacagt
gagctgatcccaggaaccactgtgggcaccttgtcgggagactccagcaatgtcctgcag
ctcatagtggactcctatgggaaaatccgctccaaggtggagctggaggtgcgtgacctc
cccgaagagctgtccctgtccttcaatgctacctgcctcaacaacgaggtcatccctggg
ctcaagtcctgcatggggctcaagatcggggacacggtgagcttcagcatcgaggccaag
gtacgagggtgcccccaagagcgccagaaatctttcaccatcaaacccgtgggcttcaag
gacagcctggtggtggtggtgaacttcaactgcagctgctcctgcgagagccaggctgag
accaacagctccttctgcagcggaggcaacggcagcctcgagtgcggcgtctgccgctgc
aaccccgggcgcctgggctcgctctgtgagtgctcagaggaggagtacaacccctcacag
caggacaactgcagcccccggccgggccagccccactgcagccagcgtggcgagtgcatc
tgcgggcagtgcgtctgccacagcagcgatttcggcaaggtgacgggcaagtactgcgag
tgcgatgacttctcctgcgtccgcttcaagggccagatgtgctcgggccacgggaagtgc
agctgcggggactgcctgtgcgactcggactggaccggcgactactgcaactgcacgacg
cgcacggacacctgcatgtccagcaacgggctggtgtgcagcggccacggctcctgcgtc
tgcggcaagtgcgactgcacccagcccggctcctacggggacacctgtgagaagtgcccc
acgtgcccggatgcctgcaccatcaaaaaggactgcgtggagtgcaagaagttcgagcgg
ggcgagctggtgaagcagcagtcctgcagccgtctgtgccgcgatgagatcgagacagtg
caggagctgggggacaggggcaaggatgctgtaaactgcacctacaaggacgagaacgac
tgcgtggtgcgcttccagtactttgaggactccagcggcaagtccatcctctatgttata
gaggagccagactgcccaaaggggccggacatcctggtggtgctgctctcggtgacaggc
gccatcctgctcattggcctggccgccctgctcatctggaagctgctcatcaccatccac
gaccgccgggagttcgcccgcttcgaggaggagaaggccagggccaagtgggacacgggc
aacaacccgttatacaaagaggctacatcgacgttcaccaacatcacgtaccgcgggaac
atgtaa
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