Cygnus atratus (black swan): 118258934
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Entry
118258934 CDS
T09349
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04382
Cornified envelope formation
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
cata04514
Cell adhesion molecule (CAM) interaction
cata04518
Integrin signaling
cata04810
Regulation of actin cytoskeleton
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118258934 (ITGA6)
04514 Cell adhesion molecule (CAM) interaction
118258934 (ITGA6)
04518 Integrin signaling
118258934 (ITGA6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118258934 (ITGA6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118258934 (ITGA6)
04810 Regulation of actin cytoskeleton
118258934 (ITGA6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118258934 (ITGA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118258934 (ITGA6)
04515 Cell adhesion molecules [BR:
cata04515
]
118258934 (ITGA6)
04090 CD molecules [BR:
cata04090
]
118258934 (ITGA6)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118258934 (ITGA6)
Exosomal proteins of breast milk
118258934 (ITGA6)
Cell adhesion molecules [BR:
cata04515
]
Integrins
Integrin alpha subunits
118258934 (ITGA6)
CD molecules [BR:
cata04090
]
Proteins
118258934 (ITGA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
118258934
NCBI-ProteinID:
XP_035423938
LinkDB
All DBs
Position
6:complement(18953739..19062039)
Genome browser
AA seq
1089 aa
AA seq
DB search
MAAALLLYLPLLPGLAGAFNLDTERVIMRRGEPGSLFGFSLAMHRQLQPQERRLLLVGAP
REKAFPSQQANRTGGLYSCDITSSNTRCTRVVFDEETDPRTESKEDQWMGVTVQSQGPGG
NVVTCAHRYEKRQYVNTVQETRDIIGRCYVLSQDLTIKDDMDNGVWSFCDGRLRGHEKFG
SCQQGVAATFTRDYHYIVFGAPGTYNWKGVVRAEQKNQTFYDLGIFDDGPYEVGDESRQD
KNLVPVPANSYLGFSLDSGKGIVSQDEMTFVSGAPRANHSGAVVLLKKEKNQRALSLEHM
FEGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDRSGDIGGAVYIYINQQGKWEGVKP
VRLNGTTDSMFGLAVENVGDVNQDGYPDIAVGAPYDGSGKVYIYHGSKNGINTKPAQILD
GEKTGTNFFGYSIAGNMDLDKNSYPDIAVGSLSDSVSVFRSRPVISIMKSITVQPDKLDL
KKRNSEDPSEIWMDVKACFHYTANPSNLNPRIKINYTFEAEKERKQLGMHSRVLFKDHQS
EKFSASTTLNGQNSKQCVTTKLVLQEIVKDKLRPIPVSVSVEIAGLESSSSSTRKEKALP
DLIPILDSNESETTIAKVEFLKEGCGEDNECHSNLKLQYRFCTREGNEDRFTYLPIENGM
PVLVLKDQKDIALEITVTNNPSDAKNPQKDGEDAYEAKLIATFPDSLTYSAFREMRGYPE
KQLTCGANQNGSQADCELGNPFKRNSNVTFYLILSTTKVNVDTTDLDINLKLETTSTQTT
LTTITASAKVVLELFLSLTGVAKPSQVYFGGNIIGESAMKSEDNIGNLIEYEFRVTNLGR
PLKTFGTASLDIQWPKEISNGKWLLYLMKIDSKGLERVSCQPQNEINSLHLAESHNSRRK
REVAEKQITDSKAFSLFSERKYKTLDCNVNARCVDIKCPLKGFDSKASILLRSRLWNSTF
VEEYSKMNYLDILVRASISVPAAAKNVKLTNEIAQVRVTVFPAKPVALYTGVPWWIIAVA
IFAGILMLALLVFLLWKCGFFQRSRYDDSVPRYHAVRIRKEEREIKDGICKDLETKQWFT
KWNENESYS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgctcctcttgtacctgcccctcctgccggggctggccggcgccttcaac
ctggacacagagcgcgtgatcatgcggcgaggcgagccgggcagcctcttcggcttctcc
ctagccatgcaccggcagctgcagccgcaggagagacggctattgctggttggagctcct
cgggaaaaagcctttccatcccaacaagccaacagaacaggagggctgtacagctgtgac
atcacgtcttcaaatacacgctgcacacgtgtcgtatttgatgaggaaactgacccgagg
acggagagtaaagaagaccaatggatgggtgtaactgtccaaagtcaggggccaggagga
aacgtggtgacatgtgcacatcgctatgaaaaaaggcagtatgtaaacacagtgcaggaa
acccgggatatcattggaaggtgctatgtgctgagccaggatctcactattaaggatgat
atggataatggagtgtggagtttttgtgatggtcgtttaagaggccatgagaagtttggt
tcctgtcagcaaggtgttgctgctacttttactagagactatcattatattgtgtttggt
gccccaggcacttacaattggaaaggggtggttcgtgcagagcaaaagaatcagacattt
tatgatctgggtatctttgatgatgggccttacgaagttggtgatgagagccgccaagat
aagaatctagttcctgttccagctaacagttatttaggtttctctttggactctggtaaa
ggaattgtctcccaagatgagatgacttttgtgtctggtgcaccaagagccaaccacagt
ggagcagttgttctactgaagaaagagaaaaatcagagggcattgtcactggagcacatg
tttgaaggagaagggctggcctcttcttttggttatgatgttgctgttgtggatctcaac
agtgatggatggcaagacattgttgttggagccccacagtattttgacagaagtggagat
attggtggtgctgtttacatctacattaaccaacaaggcaaatgggaaggagtaaaacct
gttcgcttaaatggaaccactgactcgatgtttggtcttgcagttgaaaatgttggggac
gttaatcaggatggatatccagatattgcagtaggggctccatatgatggttctggcaaa
gtatacatttatcatggatctaagaatggaataaatacaaaaccagcacagattcttgat
ggtgaaaaaacaggcaccaatttctttggttactctattgctggaaacatggacctggat
aaaaattcctaccctgatattgctgttggttccctttcagattctgtatctgtgttcaga
tcccggcctgtcataagcattatgaaaagcattacagtacagcctgacaaacttgatcta
aagaaaaggaactctgaggatcctagtgaaatatggatggatgtgaaagcatgttttcat
tatactgcaaaccccagtaatttaaatccacgaataaagatcaactatacatttgaagca
gaaaaggagaggaagcaattaggcatgcattctagggtactgtttaaagaccatcagtct
gagaagttcagtgcaagtacaaccctaaacgggcagaactcaaaacagtgtgtgacaacc
aagcttgtactgcaggaaatagtaaaagataagctacgcccaattcctgtatcagtcagt
gttgaaattgctggcctggagtctagctcatcatccacaagaaaagagaaagcacttcca
gatcttataccaattctagattcaaatgaatctgaaacaactatcgcaaaagtggagttc
ttaaaagaaggatgtggagaagacaatgaatgtcacagcaacctgaaacttcaataccgg
ttttgcactagagaaggaaacgaagacaggtttacctatttaccaattgaaaatggcatg
ccagtgcttgttctgaaagatcagaaagacatcgcactggaaataacagtgactaataat
ccatctgatgcaaaaaatccacaaaaagatggtgaagatgcatacgaagctaaactaatt
gcaacttttccagacagtctgacctattctgcattcagggagatgaggggatatccggaa
aaacagctaacatgtggtgctaaccaaaatggttctcaagcagattgtgaacttggaaat
cctttcaagagaaactccaatgtaacattttacctgatcttaagtaccactaaagttaat
gttgatacgacagacttagacattaatctgaagctggagacaacaagcactcagactact
ttgactacaattacagctagtgctaaagtggttcttgaattgtttttatcactcactgga
gtggctaagccttctcaggtatattttggaggtaacatcattggtgaaagtgctatgaaa
tctgaagataacattggaaacctcatagaatatgaattcagagtaactaacttgggcagg
ccactgaaaacatttggtacagcttccctggacatccagtggccaaaagaaattagtaat
ggcaaatggctgctgtatttgatgaaaatagattccaaaggcttggaaagagtctcctgt
caaccacagaatgaaatcaattctttgcatcttgcagaatcccataactccaggagaaag
cgtgaggtggcagagaagcagattacagacagcaaagcattttctttattctcagaaaga
aagtataagaccttggactgcaatgtgaacgcacggtgtgtggacataaaatgtcccctg
aagggttttgacagcaaggcatctattttgctgcgttccagactgtggaacagtactttt
gtagaagaatactccaaaatgaactacctagacattcttgttagagcctcaatcagtgtt
cctgctgcagctaagaatgttaaactcacaaatgaaattgctcaggtgcgtgtcactgtc
tttcctgcaaaaccagtagcactttatacaggagtgccttggtggatcattgcagtggct
atttttgctggaatactgatgcttgcactgctggtattcctgctatggaagtgtgggttc
ttccagcgttccaggtacgatgacagtgtcccccgatatcatgctgtaagaattcgaaaa
gaagagcgagagatcaaagacgggatatgcaaagatcttgagacaaaacagtggttcaca
aaatggaatgagaatgaaagttattcttag
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