KEGG   Cygnus atratus (black swan): 118258981
Entry
118258981         CDS       T09349                                 
Symbol
RRP12
Name
(RefSeq) RRP12-like protein isoform X1
  KO
K14794  ribosomal RNA-processing protein 12
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cata03009]
    118258981 (RRP12)
Ribosome biogenesis [BR:cata03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    118258981 (RRP12)
  Pre-60S particles
   Other pre-60S particles
    118258981 (RRP12)
SSDB
Motif
Pfam: RRP12_HEAT TOR1L1_N DUF6461 DUF6052 LTN1_E3_ligase_6th
Other DBs
NCBI-GeneID: 118258981
NCBI-ProteinID: XP_035424059
LinkDB
Position
7:complement(14898716..14909694)
AA seq 1322 aa
MARCGRLRAGAAAKLRRWRKGHSSDCNPETRRHRLAARSRFCSRPAEKSTLTVDAVKLHD
ELQSGSLRSGRPQGSAVPLPMEQEEDGEAATERSSGTFLSGLSDCTNVTFSKVQRFWESS
SAAHKEICAVLAAVTEVIRSRGGKETETEYFAALMTTLEAVDTPESLAAVAYLLNLVLKR
VPSPVLIKKFSDTSKAFVGIVSSQACSGSTSALRWVLSCLATLLRKQDLAAWSYPVTLQV
YHGLLSFCVHTKPKVRKAAQYGVCSVLRGSEFMFGDAAPEHHPAAPSTAKFCVQEIEKAG
GAKEATTTLHVLTLLRDLLPCFPAAAVKTCCETLLRVMTLSHVLVTACAMQAFYSLFSAH
PSTSCLPAELNAQIITALYDYVPSASDLQPLLTWLSTMERAHVNLGRLQKDLCWAHLPRL
FSAAMNCFLSPHSQVVSAAAQTLENLLTECVAPHMDELGTVTASAPAPASYLCKMFRSVE
DGLTYRFHAAWDEVLQVLEIFFESCGKQCHPVMRKCLQSLCDLRLSPHFPYTAEVDQAVG
AAVGAMGPEVLLEAVPLQIDGKEENLDFPRSWLLPVLRDYMQGARLGFFTSYFLPLAATL
KSRALEFSQAGKSLESKIYDTLQWQVWSLLPGFCTHPTDVVGAFKGLARTLGMAISERPD
LRPTVCQALRTLIHRGCETDAERAEVGRFAKNFLPILFNVYSQPEEDGSSSTQRRSVLDT
VRAYLTITDPQMVCGFLQKASEKLTSPESSEFARLSLLDLVVAMAPYADEQSLGSLYSTI
QPSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVRSHLEELQAALLDSLKSAASPAKRPR
LKCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSAGACKNAFVLLVEMGNAFIRFGPTPQ
EAMERFLLLVYAGLTGSVTMISCTVLALTRLFFEFKGERGRGAGRGGAGQRAGHGLSPAA
VADHMGLSVVEQLLQNVCLLLGSRTRDVVKAALGFLKVVLLLVDTKLLAKHVQTMLEAVG
GLSDDMRRHFRMKLRNLFTKFIRKFGFELVQGLLPAEYHKVLVNIRKAEARSRKQRALRQ
AAAETEEEEEAPAQPRGDSMEEILADSEDSEEEEEERQRGKARKKQARQKGQAWLKEGEE
DEPLNFLDPNVSQRVLATEPAPKRSRKVSHDFQVSEDGRLIIHDEEEEMEDDGAKGADEE
VADVLQEVGLRTKKSQKRRFREEADDEEPEAGSYPQYRAGGSGIHRQLGKEPAFGAEYRS
KKGKGDVKKKGQLDPYAYIPLNRARLNKRKQAKMQGQFKGLVKGAQRGAKAGRKSRLKNR
RP
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggcgcggtgcgggcggctgcgggccggggccgccgccaagctgcggcgctggcggaag
gggcacagcagcgactgcaaccccgagacccgccggcaccgcctggccgccaggagccgc
ttctgcagccggcccgccgagaagagcaccctgacggtggacgcggtgaagctgcacgat
gagctgcagtcggggtccctgcgctcggggcggccgcagggcagcgcggtgccgctgccc
atggagcaggaggaggacggcgaggccgccacggagaggtcctcgggcaccttcctgagc
gggctgagcgactgcaccaacgtcaccttcagcaaggtgcagcgcttctgggagtccagc
tccgccgctcacaaggagatctgtgcggtgctggcggccgtgacggaggtgatccgctcg
cgggggggaaaggagacggagacggagtactttgctgcgctgatgaccacgctggaggca
gtggacaccccggagtcgctggctgctgtggcctacctgctcaacctcgtcctgaagcgg
gtcccgagcccggtgctcataaagaagttttcggatacctccaaagccttcgtgggcatc
gtgtcctcgcaggcctgcagcggctccacctctgccctgcgatgggtcctgtcctgcctg
gccacgctgctgcgcaagcaggacttggcagcctggagctaccctgtcaccctccaggtc
tatcacggcttgctgagcttctgcgttcacaccaagcccaaggttcggaaagcagctcag
tacggcgtgtgctctgtcctgagaggcagcgagttcatgtttggagatgcagcccctgag
catcaccctgcggcaccctccactgctaagttctgtgtgcaagagattgaaaaagccgga
ggtgccaaggaggccaccaccaccctgcacgtcctgaccctgctgcgggacttgctgccc
tgcttccctgcggccgcggtgaagacctgctgcgagaccctgctcagagtcatgaccctc
agccacgtgctggtgaccgcgtgcgccatgcaggccttctacagcctcttcagcgcccac
cccagcacctcctgcctgccggccgagctcaacgcccagatcatcaccgcgctgtacgac
tacgtgcccagcgccagtgacctgcagccgttgctcacctggctgtccaccatggagagg
gcgcacgtcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccgtctc
ttctcggcggccatgaattgcttcctgtccccgcactctcaggtggtgtcagctgcagca
cagaccctcgagaacctcctgaccgagtgcgtggctccccacatggacgagctgggcacc
gtcactgcgtctgccccagcccctgcctcctacctctgcaagatgttcaggtcggtggag
gacggcctgacgtatcgtttccacgcggcgtgggacgaggtgctgcaggtgctggagatt
ttcttcgagtcgtgcgggaagcagtgccaccccgtcatgaggaagtgcctccagtcgctg
tgtgacctgcgtctctccccgcacttcccctacacggctgaagtggaccaggcggtgggg
gccgccgtgggtgccatgggccccgaggtgctgctggaagccgtgcccctgcagatcgac
ggcaaggaggagaatctggatttcccccgcagctggctgctgcccgtgctgcgggactac
atgcagggcgcgcggctcggcttcttcaccagctacttcctgcccttagcagccaccctg
aagagcagagccctggaattttcccaggctgggaagagcctggagtccaagatctacgac
acgctgcagtggcaggtctggagcctgctgcccggcttctgcacccaccccacggacgtg
gtgggggccttcaaggggctggcccgcaccctgggcatggccatcagcgagcgcccggac
ctccgccccaccgtgtgccaggccctgcgcaccctcatccaccggggctgcgagacagat
gcggagcgagcagaagtgggtcgctttgccaaaaacttcctgcccatcctgttcaacgtg
tacagccagcccgaggaggacggcagcagcagtactcagcgccgctccgtgctggacacc
gtgcgtgcttacctgaccatcaccgacccgcagatggtgtgcgggttcctgcagaaagcc
agcgagaagctgaccagtcctgagagctcagagtttgccaggctctccctcctggatctg
gtggtggcaatggcaccctacgctgacgagcagtcgctgggctccctgtacagcaccatc
cagccttccctccagagcaaggagcgcagcatgcagaagaaggcgtacagggtgctggag
gaggtgtgtgccgctccccatgccccctgccaggccttcgtccgctcgcacctggaggag
ctgcaggcagcgctgctggactcgctcaagagcgcggcatccccggccaagaggccccgg
ctgaagtgcctgttccacatcgtgaagcagctctcggctgagcacgagcccttcgtcacc
gccttggtcccagaggtcatcctgtgcaccaaggaggtgtcggcgggggcctgcaagaac
gccttcgtgctgctggtggagatggggaacgccttcatccgcttcgggcccactccccaa
gaggccatggagcggttcctgctcctggtgtacgcagggctcacgggctcagtcaccatg
atcagctgcaccgtgctggcgctcacccgcctcttcttcgagtttaaaggtgagcgggga
cggggtgcggggcgcggcggggccgggcagcgggccgggcacgggctgagccctgctgcg
gtcgcagatcacatggggctgagcgtggtggagcagctcctgcagaacgtctgcctgctg
ctgggctcccgcacgcgcgacgtggtgaaggctgccctgggcttcctcaaggtcgtgctg
ctgctggtcgacaccaagctgctggccaagcacgtccagaccatgctggaagctgtgggg
ggcctctcggatgacatgaggcgccacttccgcatgaagctgcgaaacctcttcaccaag
ttcatccgcaagttcggcttcgagctggtgcaggggctgctgccagccgagtaccacaag
gtgctggtgaacatccgcaaggctgaagcccgcagccgcaagcagcgcgccctgaggcag
gcggctgcagagacggaggaggaggaggaggcacctgcccagcccagaggagacagcatg
gaggagatcctggcagactcagaggactcggaggaggaagaggaggaacggcagcgaggc
aaggcgcggaagaagcaagcacggcagaaggggcaggcatggctgaaagaaggggaagag
gatgagcccctcaacttcctggaccccaatgtgtcccagcgggtgctggccaccgagcca
gcccccaagagatccagaaaagtgagccatgacttccaggtgtctgaggacgggcgcctg
atcatccacgatgaggaggaggagatggaggatgatggagcgaaaggtgcggacgaagag
gtggcggacgtgctgcaagaagtgggccttcgcactaagaagagccagaagcgtcggttc
agagaggaggcagacgatgaggaaccagaggccgggagctaccctcagtacagagctgga
ggctctgggatccaccggcagctaggcaaggagccagccttcggtgcagagtacagatcc
aagaaaggcaaaggcgacgtgaagaagaagggccagctcgacccctatgcctacatcccc
ctgaacagggccaggctcaacaaaaggaagcaggcgaaaatgcagggccagttcaagggc
ctggtgaagggcgcccagcgcggggccaaggccggccgcaagagccgcctgaagaaccgg
cgcccctga

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