Cygnus atratus (black swan): 118258981
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Entry
118258981 CDS
T09349
Symbol
RRP12
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cata03009
]
118258981 (RRP12)
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
90S particles
Other 90S particles
118258981 (RRP12)
Pre-60S particles
Other pre-60S particles
118258981 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
DUF6461
DUF6052
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
118258981
NCBI-ProteinID:
XP_035424059
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All DBs
Position
7:complement(14898716..14909694)
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AA seq
1322 aa
AA seq
DB search
MARCGRLRAGAAAKLRRWRKGHSSDCNPETRRHRLAARSRFCSRPAEKSTLTVDAVKLHD
ELQSGSLRSGRPQGSAVPLPMEQEEDGEAATERSSGTFLSGLSDCTNVTFSKVQRFWESS
SAAHKEICAVLAAVTEVIRSRGGKETETEYFAALMTTLEAVDTPESLAAVAYLLNLVLKR
VPSPVLIKKFSDTSKAFVGIVSSQACSGSTSALRWVLSCLATLLRKQDLAAWSYPVTLQV
YHGLLSFCVHTKPKVRKAAQYGVCSVLRGSEFMFGDAAPEHHPAAPSTAKFCVQEIEKAG
GAKEATTTLHVLTLLRDLLPCFPAAAVKTCCETLLRVMTLSHVLVTACAMQAFYSLFSAH
PSTSCLPAELNAQIITALYDYVPSASDLQPLLTWLSTMERAHVNLGRLQKDLCWAHLPRL
FSAAMNCFLSPHSQVVSAAAQTLENLLTECVAPHMDELGTVTASAPAPASYLCKMFRSVE
DGLTYRFHAAWDEVLQVLEIFFESCGKQCHPVMRKCLQSLCDLRLSPHFPYTAEVDQAVG
AAVGAMGPEVLLEAVPLQIDGKEENLDFPRSWLLPVLRDYMQGARLGFFTSYFLPLAATL
KSRALEFSQAGKSLESKIYDTLQWQVWSLLPGFCTHPTDVVGAFKGLARTLGMAISERPD
LRPTVCQALRTLIHRGCETDAERAEVGRFAKNFLPILFNVYSQPEEDGSSSTQRRSVLDT
VRAYLTITDPQMVCGFLQKASEKLTSPESSEFARLSLLDLVVAMAPYADEQSLGSLYSTI
QPSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVRSHLEELQAALLDSLKSAASPAKRPR
LKCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSAGACKNAFVLLVEMGNAFIRFGPTPQ
EAMERFLLLVYAGLTGSVTMISCTVLALTRLFFEFKGERGRGAGRGGAGQRAGHGLSPAA
VADHMGLSVVEQLLQNVCLLLGSRTRDVVKAALGFLKVVLLLVDTKLLAKHVQTMLEAVG
GLSDDMRRHFRMKLRNLFTKFIRKFGFELVQGLLPAEYHKVLVNIRKAEARSRKQRALRQ
AAAETEEEEEAPAQPRGDSMEEILADSEDSEEEEEERQRGKARKKQARQKGQAWLKEGEE
DEPLNFLDPNVSQRVLATEPAPKRSRKVSHDFQVSEDGRLIIHDEEEEMEDDGAKGADEE
VADVLQEVGLRTKKSQKRRFREEADDEEPEAGSYPQYRAGGSGIHRQLGKEPAFGAEYRS
KKGKGDVKKKGQLDPYAYIPLNRARLNKRKQAKMQGQFKGLVKGAQRGAKAGRKSRLKNR
RP
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtgcgggcggctgcgggccggggccgccgccaagctgcggcgctggcggaag
gggcacagcagcgactgcaaccccgagacccgccggcaccgcctggccgccaggagccgc
ttctgcagccggcccgccgagaagagcaccctgacggtggacgcggtgaagctgcacgat
gagctgcagtcggggtccctgcgctcggggcggccgcagggcagcgcggtgccgctgccc
atggagcaggaggaggacggcgaggccgccacggagaggtcctcgggcaccttcctgagc
gggctgagcgactgcaccaacgtcaccttcagcaaggtgcagcgcttctgggagtccagc
tccgccgctcacaaggagatctgtgcggtgctggcggccgtgacggaggtgatccgctcg
cgggggggaaaggagacggagacggagtactttgctgcgctgatgaccacgctggaggca
gtggacaccccggagtcgctggctgctgtggcctacctgctcaacctcgtcctgaagcgg
gtcccgagcccggtgctcataaagaagttttcggatacctccaaagccttcgtgggcatc
gtgtcctcgcaggcctgcagcggctccacctctgccctgcgatgggtcctgtcctgcctg
gccacgctgctgcgcaagcaggacttggcagcctggagctaccctgtcaccctccaggtc
tatcacggcttgctgagcttctgcgttcacaccaagcccaaggttcggaaagcagctcag
tacggcgtgtgctctgtcctgagaggcagcgagttcatgtttggagatgcagcccctgag
catcaccctgcggcaccctccactgctaagttctgtgtgcaagagattgaaaaagccgga
ggtgccaaggaggccaccaccaccctgcacgtcctgaccctgctgcgggacttgctgccc
tgcttccctgcggccgcggtgaagacctgctgcgagaccctgctcagagtcatgaccctc
agccacgtgctggtgaccgcgtgcgccatgcaggccttctacagcctcttcagcgcccac
cccagcacctcctgcctgccggccgagctcaacgcccagatcatcaccgcgctgtacgac
tacgtgcccagcgccagtgacctgcagccgttgctcacctggctgtccaccatggagagg
gcgcacgtcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccgtctc
ttctcggcggccatgaattgcttcctgtccccgcactctcaggtggtgtcagctgcagca
cagaccctcgagaacctcctgaccgagtgcgtggctccccacatggacgagctgggcacc
gtcactgcgtctgccccagcccctgcctcctacctctgcaagatgttcaggtcggtggag
gacggcctgacgtatcgtttccacgcggcgtgggacgaggtgctgcaggtgctggagatt
ttcttcgagtcgtgcgggaagcagtgccaccccgtcatgaggaagtgcctccagtcgctg
tgtgacctgcgtctctccccgcacttcccctacacggctgaagtggaccaggcggtgggg
gccgccgtgggtgccatgggccccgaggtgctgctggaagccgtgcccctgcagatcgac
ggcaaggaggagaatctggatttcccccgcagctggctgctgcccgtgctgcgggactac
atgcagggcgcgcggctcggcttcttcaccagctacttcctgcccttagcagccaccctg
aagagcagagccctggaattttcccaggctgggaagagcctggagtccaagatctacgac
acgctgcagtggcaggtctggagcctgctgcccggcttctgcacccaccccacggacgtg
gtgggggccttcaaggggctggcccgcaccctgggcatggccatcagcgagcgcccggac
ctccgccccaccgtgtgccaggccctgcgcaccctcatccaccggggctgcgagacagat
gcggagcgagcagaagtgggtcgctttgccaaaaacttcctgcccatcctgttcaacgtg
tacagccagcccgaggaggacggcagcagcagtactcagcgccgctccgtgctggacacc
gtgcgtgcttacctgaccatcaccgacccgcagatggtgtgcgggttcctgcagaaagcc
agcgagaagctgaccagtcctgagagctcagagtttgccaggctctccctcctggatctg
gtggtggcaatggcaccctacgctgacgagcagtcgctgggctccctgtacagcaccatc
cagccttccctccagagcaaggagcgcagcatgcagaagaaggcgtacagggtgctggag
gaggtgtgtgccgctccccatgccccctgccaggccttcgtccgctcgcacctggaggag
ctgcaggcagcgctgctggactcgctcaagagcgcggcatccccggccaagaggccccgg
ctgaagtgcctgttccacatcgtgaagcagctctcggctgagcacgagcccttcgtcacc
gccttggtcccagaggtcatcctgtgcaccaaggaggtgtcggcgggggcctgcaagaac
gccttcgtgctgctggtggagatggggaacgccttcatccgcttcgggcccactccccaa
gaggccatggagcggttcctgctcctggtgtacgcagggctcacgggctcagtcaccatg
atcagctgcaccgtgctggcgctcacccgcctcttcttcgagtttaaaggtgagcgggga
cggggtgcggggcgcggcggggccgggcagcgggccgggcacgggctgagccctgctgcg
gtcgcagatcacatggggctgagcgtggtggagcagctcctgcagaacgtctgcctgctg
ctgggctcccgcacgcgcgacgtggtgaaggctgccctgggcttcctcaaggtcgtgctg
ctgctggtcgacaccaagctgctggccaagcacgtccagaccatgctggaagctgtgggg
ggcctctcggatgacatgaggcgccacttccgcatgaagctgcgaaacctcttcaccaag
ttcatccgcaagttcggcttcgagctggtgcaggggctgctgccagccgagtaccacaag
gtgctggtgaacatccgcaaggctgaagcccgcagccgcaagcagcgcgccctgaggcag
gcggctgcagagacggaggaggaggaggaggcacctgcccagcccagaggagacagcatg
gaggagatcctggcagactcagaggactcggaggaggaagaggaggaacggcagcgaggc
aaggcgcggaagaagcaagcacggcagaaggggcaggcatggctgaaagaaggggaagag
gatgagcccctcaacttcctggaccccaatgtgtcccagcgggtgctggccaccgagcca
gcccccaagagatccagaaaagtgagccatgacttccaggtgtctgaggacgggcgcctg
atcatccacgatgaggaggaggagatggaggatgatggagcgaaaggtgcggacgaagag
gtggcggacgtgctgcaagaagtgggccttcgcactaagaagagccagaagcgtcggttc
agagaggaggcagacgatgaggaaccagaggccgggagctaccctcagtacagagctgga
ggctctgggatccaccggcagctaggcaaggagccagccttcggtgcagagtacagatcc
aagaaaggcaaaggcgacgtgaagaagaagggccagctcgacccctatgcctacatcccc
ctgaacagggccaggctcaacaaaaggaagcaggcgaaaatgcagggccagttcaagggc
ctggtgaagggcgcccagcgcggggccaaggccggccgcaagagccgcctgaagaaccgg
cgcccctga
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