Cygnus atratus (black swan): 118259200
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Entry
118259200 CDS
T09349
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118259200 (MKRN1)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118259200 (MKRN1)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118259200 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-C3HC4
zf-RING_UBOX
zf-CCCH_3
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-CCCH_9
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
118259200
NCBI-ProteinID:
XP_035424442
LinkDB
All DBs
Position
1:complement(60935338..60954856)
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AA seq
482 aa
AA seq
DB search
MAEAVALGTAAGAAAAAAAAAAAALGPSAAAAAAAEEAGTLFGPAAVPPLALGPGGGWTK
QVTCRYFMHGVCKEGDNCRYSHDLSTSQSAMVCRYYQRGCCAYGDHCRYEHTKPLIQEEE
DVTTVNPDEKIYPSVSSDLASFPDETIEEEIVELEAEDLDLAAAGVGVEDWVNAVEFVPG
QPYCGRAATSCTELPLDGMVIEEEYEKQEENEEMKKELCPYAAVGECRYGENCVYIHGDV
CDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPS
ERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQ
KLIQKYKEAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKVGMAQRRNRFW
EFIEERENGDPFETDEDEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDYYDL
DL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcggtggcgctgggcacggcggcgggcgccgcggcggcggcagcggcagca
gcagcagcagccttggggccgagcgccgccgccgcggcggccgcggaggaggcgggcacg
ctgttcgggcccgcggccgtgccgccgctcgccctggggccgggaggcggctggaccaag
caggtcacctgcaggtatttcatgcatggagtttgcaaggaaggagacaactgtcgctac
tcccatgacctgtccactagtcagtctgccatggtgtgcaggtattatcagcgaggatgc
tgtgcttacggagatcattgcagatatgaacacaccaagccactgatacaggaagaagaa
gatgtgactactgtgaatccagatgaaaaaatttatccctcagtatcttcagaccttgca
tcattccctgatgaaaccattgaagaagaaattgttgagttagaagctgaagatttagat
ctggcagctgcaggagtaggtgttgaagactgggtgaatgctgtagaatttgtccctggg
cagccatactgtggacgtgctgctacttcctgcactgagttacccttggatggaatggtg
attgaggaagaatatgagaagcaggaagaaaacgaggagatgaagaaggagctatgcccc
tacgccgcagtaggagaatgtcgttatggagaaaactgcgtatatatccatggggatgtg
tgtgatatgtgtgggctgcaggtcttgcatccaattgatgctgcccagagatcccagcac
ataaagtcttgcattgaagctcacgagaaggacatggagctttcatttgccgtccagcgt
agtaaagacatggtgtgcgggatatgcatggaggtggtatatgaaaaagctaatcctagt
gagcgccgctttgggatcctctccaactgcaaccacacttactgtctcaagtgcatccgc
aagtggaggagtgctaaacaatttgagagcaagattataaagtcctgcccagaatgtcgg
atcacatctaactttgtcattccaagtgagtactgggtggaggagaaagaagagaagcag
aaactcattcagaaatacaaggaggcaatgagcaacaagccatgcaggtattttgacgaa
ggccgtgggagctgtccatttggagggaactgtttttacaaacatgcgtatcctgacggc
cgtcaagaggagccgcagagacccaaagtaggaatggcccagcgaaggaatcggttctgg
gagttcatcgaggagcgagagaatggtgatccatttgagaccgatgaagatgaggtggtg
acctttgagcttggtgagatgttgctcatgctgttggcagcaggaggtgatgatgagcta
acagattccgaggacgagtgggacttgtttcatgatgagctggaagattattatgacttg
gatctatag
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integrated database retrieval system
