Cygnus atratus (black swan): 118259335
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Entry
118259335 CDS
T09349
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118259335 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118259335 (USP39)
Spliceosome [BR:
cata03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
118259335 (USP39)
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GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118259335
NCBI-ProteinID:
XP_035424662
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Position
27:complement(4807866..4811781)
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AA seq
580 aa
AA seq
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MSSRGKRDRERERERDRREGEAERGRGRREAERGRDKREAAESGGGPGPGLAGGPARLRK
EPGAGSGAWAGTGTGTGTGAGSGPVRVKREREPEGESDPEPEPAVRYGRFDPEDQRSRHC
PYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQLSHHVFL
NLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTAQHISNLDKQAKLSRAYDGTTYLPGIV
GLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKSIKRPPGDIMFLLVQRFGELMRKLW
NPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIV
TDVFQGSMRIFTKKLPHPDLPAEEKAQLLQNAEYQETMVESTFMYLTLDLPTAPLYKDEK
EQLIIPQVPLFSILAKFNGATEKEYKTYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVE
KNPTIVNFPITNVDLREYLSEEVQAVHTNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGK
WYELQDLQVTDILPQMITLSEAYIQIWKRREEDETNQQGA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccgcgggaagcgggaccgggagcgggagcgggagcgggaccgccgggagggg
gaggcggagcggggccggggtcggcgggaggcggagcggggccgtgacaagcgggaggcg
gcggagagcggcgggggcccggggccgggcctggcggggggccccgcgcgcctcaggaag
gagccgggggccggcagcggggcctgggccgggaccgggaccgggaccgggaccggggcc
gggagcgggcccgtgagggtgaagcgcgaacgggagccagagggggagtccgaccccgag
cccgagcccgccgtgcgctatggccgcttcgaccccgaggaccagcgcagccgccactgc
ccctacctggacaccatcaacaagagcgtgctggattttgactttgagaagctgtgctcc
atctcgctgtcccacatcaacgtctacgcctgcctggtctgcgggaagtacttccagggc
cgggggctgaagtcccacgcctacatccacagcgtgcagctcagccaccacgtcttcctc
aacctgcacaccctcaagttctactgcctgcccgacaactacgagatcatcgactcctcc
ctcgaggacatcacgtacgtgctgaagcccaccttcaccgcgcagcacatctccaacctg
gacaagcaggccaagctttcgcgcgcctacgacggcaccacctacctgcccggcatcgtg
gggctcaacaacatcaaggccaacgactacgccaacgccgtgctgcaggctctgtccaac
gtccccccgctgcggaattacttcctggaggaggacaactacaagagcatcaagcgcccg
cccggggacatcatgttcctgctggtgcagcgcttcggggagctgatgcggaagctgtgg
aacccgcgcaacttcaaggcgcatgtctcgccccacgagatgctgcaggccgtggtgctg
tgcagcaagaagaacttccagatcaccaagcagggggacggggtcgatttcctctcctgg
ttcctcaacgcgctgcactcggccctgggcggcaccaagaagaagaagaaaaccatcgtc
accgacgtcttccagggctccatgcgcatcttcaccaaaaagctgcctcaccccgacctg
cctgccgaggagaaggcgcagctgctgcagaacgccgagtaccaggagacgatggtggag
tccacgttcatgtacctgacgctggacctgcccacggcgccgctctacaaggacgagaag
gagcagctcatcatcccccaggtgcccctcttcagcatcctggccaagttcaacggcgcc
accgagaaggagtacaagacctacaaggagaacttcctcaagcgcttccagctcaccagg
ctgccgccctacctcatcttctgcatcaagcgcttcaccaagaacaacttcttcgtggag
aaaaaccccaccatcgtcaacttccccatcaccaacgtggacctgcgggagtacctgtcg
gaggaggtgcaggcggtgcacaccaacaccacctacgacctcatcgccaacatcgtgcac
gacgggaaaccctccgagggctcctaccgcatccacgtgctgcaccacggcaccggtaag
tggtacgagctgcaggacctgcaggtcaccgacatcctgccgcagatgatcacgctttcc
gaggcctacatccagatctggaagcggcgtgaggaggatgagacgaaccagcaaggcgcc
tga
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