Cygnus atratus (black swan): 118259405
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Entry
118259405 CDS
T09349
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118259405 (TP53BP1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT
BRCT_2
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
118259405
NCBI-ProteinID:
XP_035424792
LinkDB
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Position
11:21940627..21989806
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AA seq
1949 aa
AA seq
DB search
MDPGGSQPDSGLSQQGTPCLIVADSQPESVGPEEDAEQACLGVLARRLPVRRSPSPVLEI
VCGPAGSRAPAGGGADRERPAGESEARGRAGGAVLAEPMESPARPDAAGPRSRVAEEVPS
PGGESSALVKTGERAGSDVEDCPTSPCVEDTGMSQLHFGALELSQSQDFESDFVPNEEDA
RHQFHSGAAIPSSSRPAKSDSKDEPNVHNREIVSSIETHAALESQPEEFERTLQEAEEGT
TKEMPVSDPLKTEKSVGICHEELDILSTQEEMFPENNVTGNGCPVTRVEEGSSLACTPAR
SLHLLQLSGQGSLVQQSRSTGSSGLVVPSPVAFGSNALVPSSPTEQEQAKDEQMDISIPS
QARELIQEEQRGEALMQEQQREEALVEIAIPCIPPGPSVLPQASTPVSQSAPAFFPGSLP
IPSQPEFSHVRVHDIFVPTQSPEKRHEGEEKTAALTCSCLPGDLSGTTDVLSKVPMGDSV
PQASESCNLILSVSECSESTKAEVSSGSLKTSQDSETSQVQKVPECKASDLSLCSVENDN
TKLRLDAGHQALSENCEKAKKEGIKTAGKPVMQLVSAGEAGNESLAPTAHQDHGCISGSQ
AAEDQSGQPEILSCTQGGEAQSEGYPLEETSEPEAVPETQCEEQEEELQVEEKQINEDES
LVNITLSQRFILEREVQSHEDMEVDFAGGSCKNSKKLSDQTEELGKVGPECCVKETLQSC
TFGIGEAKNMDKLSSKAASENMPKLSKVLSKPSVGELMEQHNNLFPKLKTDIPSEVALCV
KSYPDGSELDQAMKMENQTPLQEKGIDVLVAQQENCIPKSTEDTAMTRNLEQDEKMQPQE
RVAAKSPSPSNGTPFHFTLPKEGDIIQPLTSITPPLTGQLKMGPRRHSTPIAADSCPDST
IATSDVTAEGTMGTNNVTMESAVVSADVSEVCEKGDSRVVPEADAKLSLQMNLVTPVNDG
SEESLRFCLEKPTASDRKNGSAAAASSQKASSVFSRVCEVRREDEARGHDLSASPFRGNL
FSFPGTEDDDELCKNPSELCKNPSGQQCRQHRADDSGRQLLIPQRMQQGCHQQPSCAEER
ESMETGTVSTQMEEGTRIQKKPSKAVAINESQEKQANTNNKGIQTTADCHFTPTTVTVAT
QTAEAICRRVDVGTSMSGQRPGRQDANIQTEESGEKLVNASGEDTDSLHSQGEEEFNLLH
PPRGQVQRRHMRTVREVRTVVTRVITDVYYINGAEVERKVVEETEEPVVECQECETDTSS
SRTAVGSSLTSGDLGDVSSFSSKASSLHRTSSGASSGHSATHSSSSARGTGAVKGKMCGA
ETGEFVLPIGRGILGKLSPRKGAGQPASPLRVSQTGALLCEEEEDSVLGTRQGGRAPVTP
RGRGRRGRPPSRTTATRDLAGIPGVEDLSTTASPEEKSFVRAVRQPDGGEKSDTSGFCAL
RRSDSPEIPLQVVTGPSDCADSSSGSSFVGLRVVAKWSSNGYFYSGMITQDVGAGKYKLL
FDDGYECDVLGKDILLCDPIPLETEVTALSEDEYFSAGVVKGHRKESGELYYCIEKEGQR
KWYKRMAVILSLEQGNKLREQFGLGPYEPVTPLTKAADISLDNLVEGKRKRRSNLGSPST
SSSSTTPTRKGLESPRIPPGVLSGKRKLVASEEERSPAKRGRKSATIKPGAVRAGEFVST
CEGVDTVDPPVLEDHHGPLPHNKTLFLGYAFLLTMATPSDKLVNRQKTSDGPAGSSEEEE
EFLDMTPYNKHYIAQQLRAGAGYILEDFNETQCNAAYQCLLIADQHCRTRKYLLCLARGI
PCVSHIWVHDSCHANQLQNYRNYLLPAGYSLQEQKLLEWHPRENPFHNLKVLLVSDQQQN
FLDLWSEILMIGGATSVRQHYSNAHNKDIALGVYDVVVTDFSCPAVVLKCAEALRLPVVS
QEWVIQSLISGERVGYNKHPKYKHDYVPH
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcggcagccagccggactccggcctctcgcagcaaggcacgccctgcctg
atcgtggcggactcgcagcccgagagcgtgggcccggaggaggacgcggagcaggcctgc
ctcggcgtgctcgcccgccggctgccggtccgaaggagcccgagccccgtgctggagatc
gtctgcggccctgccggcagccgggcacccgcgggcggcggggcggacagggagcgaccc
gcaggtgagagcgaggcgcggggccgcgctggcggcgccgtgcttgcggagccgatggag
agccctgcccgcccggacgctgccggcccgcgcagccgcgtcgccgaggaggtgccgtcg
cccggcggcgagagcagtgcccttgtaaagactggagaaagagctggaagcgatgttgag
gactgtcctacctcgccatgtgtagaagatacaggcatgtcacagctgcattttggagct
ctagagctctcacagagccaggactttgagagtgactttgtgcccaatgaagaagatgct
aggcatcagtttcactctggagctgctatcccatcttcttccagacctgcaaagagtgat
tctaaagatgaaccgaatgtgcataacagggaaattgtctccagcatagaaacgcatgct
gctttggagagccagccagaggagtttgaaagaactctgcaggaagcagaagaaggtacc
acgaaagaaatgcctgtctctgatccacttaaaactgagaaatccgttggtatttgtcat
gaggagttggatatcttgtcaactcaggaagagatgtttcctgagaataatgtaacaggg
aatggctgtcccgtaaccagggtggaagagggaagttctctggcatgcacccctgcccgc
agtctgcacctcctgcagctctctggacagggatctcttgtacagcagagtcgttccact
ggctcttcaggcctagttgttccatctcctgttgcctttggatccaatgctctcgtccct
agcagtcctactgaacaggagcaagcaaaagatgaacagatggatatctctatcccatca
caagcaagagagctgatacaggaggagcagaggggagaggcgctgatgcaggagcagcag
agggaagaggcgctagtggagatagctatcccatgtatcccaccaggaccttctgtcctc
ccacaggcttcaactccagtgtcccagagtgccccagccttctttcctggatctttacct
ataccatcacaaccagagttctctcatgtgagggttcatgatatttttgttccaactcag
agcccagagaagagacatgaaggagaagaaaaaactgctgctttaacctgttcgtgctta
ccaggagacctctctggaaccacagatgttttgtcaaaggtgcctatgggggactctgtg
ccacaggcttctgagtcttgtaatctgatcctttctgtaagtgaatgtagcgagtctaca
aaagcagaagtcagttcaggctctctgaaaactagccaagatagtgaaacctcacaggta
cagaaggttcctgaatgcaaggcctcagacttgagcctttgttctgtggagaacgacaac
acaaaactgagactggatgcaggccatcaagccctctctgagaactgtgaaaaagcaaaa
aaagagggtataaagactgcaggaaagcctgtaatgcagttagttagtgcaggtgaagca
ggaaatgagtcattagcccccacagctcatcaagatcacgggtgtatttctggaagtcaa
gctgctgaagatcagtctggtcagcctgagattttgtcctgtactcagggcggagaagca
cagtctgagggttatccattggaagagacttctgaacctgaggcagttcctgagactcaa
tgtgaagaacaagaagaagagctgcaagtagaagagaagcaaataaacgaagatgagtct
cttgttaacataaccctttctcagaggtttattcttgaaagggaggtacagagtcatgaa
gacatggaagtggattttgctggtggctcttgtaaaaatagcaaaaaattgtctgatcag
accgaagaattaggaaaggttggaccagaatgctgtgtaaaagaaactttacaaagttgt
acttttggcattggagaggcaaagaacatggataaactgtcctctaaagctgcttcagaa
aacatgccaaagctcagtaaagttttgtccaagccttctgtaggggagttaatggaacaa
cacaacaatttgttccctaaattaaagactgacattccatcagaagtggcattgtgtgtg
aaaagctacccagatggttcagaattagaccaggcaatgaaaatggagaatcaaacgcca
ctgcaggagaaagggattgacgtgcttgtggctcagcaggagaattgtataccgaagagt
acagaggatactgctatgacaaggaatctggagcaagacgagaagatgcagccacaggag
agggtagctgctaagtctcccagtccttccaatggaactccgtttcattttactttgcca
aaggagggtgatatcattcagcccttgaccagcataacaccacctcttactggccagctt
aaaatgggacctagaagacacagcacaccaattgcggctgatagttgtccagacagcact
atagcaactagtgatgttacagctgagggtacaatgggtaccaacaatgtcaccatggaa
agtgcagtggtatcagcagatgtgtcagaagtgtgtgaaaaaggagattctcgtgtagtt
cctgaagctgatgcaaaactctctctgcaaatgaaccttgttacccctgtgaatgatggg
agtgaggaatccctgcggttctgcttggaaaagcctacagccagtgacaggaaaaacgga
tctgctgctgctgccagctcccagaaagcatcatctgtgttcagtcgtgtctgtgaagtt
cggcgagaggatgaggccagaggccatgacctttcagcttctccatttagggggaatcta
ttcagttttcctggcacagaagatgatgatgaattatgtaaaaatcccagtgaattatgt
aaaaatcccagtggtcagcagtgccggcaacacagagcagatgacagtggtagacagctc
ctgattcctcagaggatgcagcagggctgccatcagcaaccttcttgtgcagaggagagg
gagtctatggagactggtactgtaagcactcagatggaagaagggacaagaatacagaag
aaaccaagtaaagctgttgcaattaatgaaagccaagagaagcaggcaaatactaataat
aaagggattcaaactacagcagactgtcattttaccccaacaactgttacagtagcaaca
caaacagcagaagcaatctgtaggcgagtggatgtgggaaccagtatgtctgggcaaaga
cctggtcgacaagatgcaaacatccaaactgaggagagtggggaaaagcttgtgaatgca
tctggagaagacacagactctctgcacagtcagggagaggaggaatttaaccttcttcac
ccacccagaggccaggttcagcgtcgccacatgcgaactgttcgagaggtgcgcactgtt
gttacccgtgttataacagatgtttactacataaatggcgcagaggtggaacgaaaggta
gtcgaggaaactgaggagcctgtagtggagtgccaggagtgtgagactgacacatcctcc
tctagaacagcagtgggctcatcactgacctcaggggaccttggtgatgtcagctccttc
tcgtctaaggcctcaagcctccaccgcacatccagtggagcaagcagtggtcactccgca
acacacagcagcagctcagcacgaggaactggagctgtcaaagggaaaatgtgtggtgca
gaaactggagagtttgttttacccattggcagaggcatcttgggaaaactaagccctagg
aaaggagctggtcagccagcatctcctctcagagtaagccagacaggagcacttctgtgt
gaggaagaggaggactctgtgcttggtactcgtcagggtggcagagcacctgttacacct
cgtgggcgaggaagaagaggccgcccaccatctcgaacaactgcaacaagagatttagct
ggaattccaggtgtagaggatctctcaactacagcatcacctgaggagaaatcatttgtt
cgtgcagttcgccagccagatggaggggagaaatctgacacttctggcttctgtgcctta
cgtcgaagtgactctccagaaatcccattgcaagtggtgactggtccttcagactgtgca
gactcatcctctgggagcagctttgtgggcctcagggttgtagcaaagtggtcttcaaat
gggtacttctattccggaatgataacccaagatgttggcgcagggaagtacaagctgctt
tttgatgatgggtatgaatgtgatgtgctaggaaaagatattttactgtgtgaccctatc
ccactggaaactgaggtgactgcactctcagaggatgagtacttcagtgcaggcgtagtg
aaaggacaccggaaagagtctggagagctatattattgcattgaaaaggaaggccagagg
aagtggtacaaacgaatggctgttatcctgtctttggaacaaggaaataagctccgggag
cagtttgggctaggcccttacgaacctgtcacccccctgacgaaggcagctgacatcagt
cttgataatcttgtggaggggaaacggaagcgacgtagtaaccttggctctcccagcact
tccagcagtagcacaactcccactcgtaaagggctggagagtccacgcatcccaccaggt
gtgctgtccggtaagaggaagcttgttgcttctgaagaagagagatccccagctaaacgt
ggccgcaagtcagcaacaataaagcctggggctgtgagggcaggagagtttgtgagcacc
tgtgaaggtgtagacactgtagatcccccagttttggaggaccatcatggaccattgccc
cacaataagacactctttttgggttatgcctttcttctcaccatggcaacacccagtgac
aaattggtcaatcgccagaagacatcagatggtcctgcagggagtagtgaagaagaagaa
gaatttttagatatgactccatacaacaaacattatatagcacaacagctgcgagcagga
gctggctatatcttggaagactttaatgaaacccagtgtaatgcagcatatcagtgtctt
ttaattgcggaccaacactgtcgaactcggaaatacttgctgtgccttgccagaggaatc
ccttgtgtgtctcatatctgggtccatgatagctgtcatgctaaccagcttcaaaattac
cggaattaccttttgccagctggttatagcctccaggagcaaaagttgctagaatggcac
ccccgagaaaatccatttcataacctgaaggttctcctggtgtcagaccagcagcagaac
ttcctggatctgtggtctgaaatccttatgatagggggagcaacatctgtgagacagcat
tattcaaatgctcacaacaaagatattgctttgggtgtttatgatgtggtggtgactgac
ttttcctgcccagctgttgtcttgaagtgtgcagaagcattacgtctgcctgttgtctcg
caggagtgggtgatccagagccttatttctggggagagagtaggctacaataagcatccg
aaatataaacatgactatgtcccccactaa
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