Cygnus atratus (black swan): 118259472
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Entry
118259472 CDS
T09349
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03022
Basal transcription factors
cata03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118259472 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
118259472 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118259472 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118259472 (GTF2H2)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118259472 (GTF2H2)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118259472 (GTF2H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
IBR
Motif
Other DBs
NCBI-GeneID:
118259472
NCBI-ProteinID:
XP_035424920
LinkDB
All DBs
Position
Z:67866461..67879864
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQMGLIVTKSKRAEKMTEL
SGNSKKHITALKKAVDMNCHGEPSLYNSLNLAMQTLKHMPGHTSREVLVVFSSLTTCDPT
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPGLTLGGYFCPQCRAKYSE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYQGERYCQGCHGEIKDQNVYIC
KVCQNAFCVECDMFVHDSLHCCPGCIHEHPAPISV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagcccgaaaggaccaagcgctgggaaggaggctacgagagaacatgggag
atcctcaaggaggacgaatcgggatcgctgaaagcgaccatcgaggacattctgttcaag
gccaagaggaaaagactctacgaacaccatggacaagttcgactgggaatgatgcgtcac
ctttatgtggttgttgatggatcaaggactatggaggaccaggatttaaaaccaaacaga
cttacctgcactttgaagttactggaatattttgttgaagagtactttgaccaaaatcct
attagtcagatgggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaactcaaaaaagcacataactgctctgaagaaagcagtggatatgaactgccat
ggagagccgtctctatataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttggtagtcttcagcagtctgacaacatgtgatccaacc
aacatctatgatctaattaagtgtttaaaagcagttaagatcagagtgtctgtcatcggt
ctaagtgctgaagttcgagtttgtacagtacttgcccgggaaactggtggaacataccat
gttattttagatgaaagtcattataaggaactgctaatgcatcatgttagtcctccacct
gccagttcaagttccgagtgctccctaattcgaatgggttttcctcagcacactattgct
tccctctctgatcaagatgcaaagccatcctttagcatggcgcaattggaaaacaacagt
gagccaggtcttacgctgggtgggtacttctgtccccagtgcagagcaaaatactctgaa
cttcctgtggagtgcaaaatctgtggtcttacattagtgtctgcacctcatctagctcga
tcttaccatcacttgttccctttggatgcctttcaggaaattccactggaagaatatcag
ggagaacggtattgtcaagggtgccatggagaaatcaaagatcaaaatgtttatatatgt
aaagtatgccagaatgcattttgcgtggagtgcgacatgtttgttcacgattctctgcac
tgctgtcctggctgtattcatgagcaccctgctcccatatctgtatga
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