Cygnus atratus (black swan): 118259611
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Entry
118259611 CDS
T09349
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03030
DNA replication
cata03410
Base excision repair
cata03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118259611 (POLE)
03410 Base excision repair
118259611 (POLE)
03420 Nucleotide excision repair
118259611 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cata03032
]
118259611 (POLE)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118259611 (POLE)
Enzymes [BR:
cata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118259611 (POLE)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
118259611 (POLE)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
118259611 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
118259611
NCBI-ProteinID:
XP_050570222
LinkDB
All DBs
Position
17:complement(207961..258836)
Genome browser
AA seq
2270 aa
AA seq
DB search
MAQCLGGDRDDGPALSALKRLERSQRTERLDALFGFERPAEPGERTGWLINMHPTEVLDE
DRRPVSAVDYYFVQEDGSRFKVALPYRPYFYIATQQGCEREVSSFLSKKFQGKIAKLETV
PKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVRKNRERDQASDVYTSMLSSA
LAGGSLTTEEEGASKKIANQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSTLP
PEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMVSYMIDGQGYLITNREIVS
EDIEDFEFTPKPEYEGPFRVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEA
RAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGY
DPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLR
KGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRS
DIPCRFKMNPAAFDFLVQHVEKTLRHAIEEEEGLPLDQVTNFQEVCDEIKVKLNSLKDVP
NRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGANCQRRMTWQWRGE
FMPASRSEYHRIQQQLESEKFPSLYPDGAPRAFHELSREEQAKYEKKRLADYCRKAYKKI
HVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEMGDASEVKRC
KNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIG
RPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELE
DPTSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVK
RRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELIS
ENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAI
PLAIFQAEPTVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQV
KNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVLANQPQEGTPSSQISDIED
FGVAKTLQPSIPIANKRKRVPMAEESQQMSQSLELSQSWREILGPPPPMGTSKEQHLVWL
RYHKKKWELQARQRQERRKRRRLEDGRVATGGGVVRDALSKGLSNYLRRTARSILDLPWQ
IVQITETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVNQRIAKPEEGAVYRKVNRILPRSN
LVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVHLGCVCMVSRQLV
RYLTGREAETFDIEHLEMRSLAQFTYLEPGSIRHIYLYHSSQGTKALFGLFIPSQRKAAV
FVLDTVRSNQMPNLTNMFSAERSALLEKVGEDLLPPDKHIFEVRAETDPKTIYRAIQRLL
LGYKDERRGPTLIAVQSNWDLKRLASGIPIIEEFPLVPVRVTDDISYSVLDWQRHAARRM
IRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDLFFSRHLRRHNHLLWLSPTARP
DLGGKEADDNRLVMEFDERALVEINNPGCYSTVCLELDIQSLAVNTVLQSHHVNDMEGGS
SMSVSFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILKSMVVSWVKEITQYHNI
YADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRII
LCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIKGKVHSR
IHYREKDTSKRQVLEEEDSDEEEEVGEEEEEGESNVEELLENSWNIVQFLPQAASCQSYF
LMIVSAYIVAVYHSMKEELQRNAPGSTPVKRRGTSQVSQEALRETGAMPGMITFSQDYVA
NELTQSFFTITQKIKKKMAGSRNATEPSDLFPVLPGSYLPLNNPALEFIKYVCKVLSLDA
NITNQVNKLRRDLLRLIEVGEFSDEAQFRDPCRSYVLPEVICRNCNFCRDLDLCKDPALS
QDGSVLPSWVCSNCEAQYDSDSIEMALVEALQKKLMAFMLQDLVCNKCRGVKDTHMPVYC
SCAGEFALTISSQIFMEHIAIFQNIARHYSMAYLLETIEWLLRTNPRLQQ
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatgtctaggtggagatcgggacgatggccccgcgctgtccgccctcaagcgc
ctggagcggtcgcagcgcacggagcggctggacgcgctgttcggcttcgagcggcccgcg
gagcccggcgagcggacgggctggctcatcaacatgcatccgacagaggtgctggatgag
gaccggcggccggtgagcgctgtggactactactttgtccaggaggatgggagccgcttc
aaggtggctttaccctacagaccctacttctacatcgccacccagcagggctgtgagcga
gaagtgtcctccttcctttctaagaagttccaagggaaaattgcaaagctggaaactgtc
cccaaagaagacttggatctgccaaatcacttggtgggtctgaagcggaactacatcaag
ctgtccttcaacacagtggatgacttggtgaaggtgcgaaaagagatttctcctgctgta
aggaaaaacagagagcgagaccaggcgagcgatgtctatacgtccatgctgtcaagtgct
ctggctggaggcagcctgaccacagaggaggaaggagcctcaaaaaagattgccaaccaa
atggacaacattgtggatatgcgggagtatgatgtaccctaccatgttcgcctttccatt
gacttgaagatccatgtggctcactggtacaacgtgcgataccggggcagcaccctccct
ccagaaatcacccgccgagatgacctcgtggagcgaccagatcctgttgttcttgccttt
gacattgaaactaccaaactccccttgaagtttcctgatgcagagacagaccagatcatg
atggtctcctacatgattgatgggcagggctacctgatcacaaacagggagattgtctcc
gaggatattgaagactttgagtttactcccaagccagagtatgagggaccgtttcgtgtc
tttaacgaaccagatgaagctcatttaatccagaggtggtttgaacatgtccaggagacc
aaacctactatcattgtcacatacaatggagacttctttgactggccctttgtggaagca
agagcagcagctcatggaattaatatgtatcaggaaattggatttcagaaggacagccag
ggagagtacaaagcatcacagtgcatccacatggactgtctaaggtgggtgaagagagac
agttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaagctgggctat
gatccagtggagctggaccctgaagagatgtgccggatggctacagaggagcctcagacc
ctggccacttattcagtgtccgacgcagttgctacctattacatgtatatgaagtatgtg
catcctttcatttttgcattgtgcaccatcattcccatggagcctgatgaggtgttacgg
aagggttctgggacactgtgtgaggcactgctgatggttcaagcctatcacgccaacatc
atcttccccaacaagcaggagcaggagtttaacaaactcacagaggatggacatgtgctg
gactcggagacatatgtaggaggccacgtggaagcactggaatcgggagtttttcgcagt
gacatcccctgccgcttcaaaatgaatcctgctgcctttgacttcttggtgcagcatgtg
gagaagacactccggcatgctattgaggaggaggagggtttgccattggatcaagtcacc
aacttccaggaggtttgtgacgaaatcaaagtcaaactgaattccctgaaggatgtccct
aacagaattgagtgtccccttatctaccatttagacgtgggggccatgtaccccaacatc
attctgaccaacagattgcagccctcagcaatagtagatgaggccacatgtgctgcctgt
gacttcaacaagccaggtgccaactgtcagcgccggatgacatggcagtggagaggagaa
ttcatgcctgcaagccgcagtgagtatcaccgcatccagcagcagctggaatctgagaag
ttcccttcactgtaccccgatggagcaccccgggccttccacgagctctcccgtgaagaa
caggccaagtatgagaagaagcgactggcagattattgccggaaggcctataagaagatc
cacgtcaccaaggtggaggagcgggtcaccaccatctgccagcgagagaattctttctat
gtggacactgtgcgagctttcagggaccgtcgctatgagttcaaggggctgcacaaggtg
tggaagaagaagctgtctgcagctgtggagatgggagatgcctctgaagtgaaacgctgc
aagaacatggagatcctctatgattcactgcagctggcacacaagtgcatcctcaattct
ttctacggctatgtcatgcggaaaggagctcgctggtactccatggaaatggctgggatt
gtctgcttcaccggagcaaatattatcacacaggccagggaactgattgagcagattggg
agacctctggaactggatacagatgggatttggtgtgtccttcctaacagcttcccagaa
aactttgtcatcaagtcaaccaatgccaagaagccaaaggtgacaatctcctacccaggt
gctatgctgaacatcttggtgaaggaaggcttcacaaatgatcagtaccaagaactggag
gacccaacctctctcacctatgtcacacgctcagagaacagcatcttctttgaagtggat
ggaccatacctggccatgatcctcccagcttccaaggaggagggcaagaagctgaagaaa
aggtacgcggtgttcaacgaggatgggtccctggctgagctgaaggggtttgaggtgaag
cgacgaggtgagctgcagcttgtgaagatattccagtcttcggtatttgaggcctttctg
aaaggcaccaccctggaggaggtctacgcttctgtggccaaggtggccgattactggcta
gacgtgctgtacagcaaggctgccaacatgcctgattcagagctgtttgagctgatctcg
gagaaccgttccatgtctcgcaagctggaggactatggggagcagaaatccacctccatc
agcactgccaagcgcctggcagaattcctgggagaccagatggtaaaggatgcagggctg
agctgccggttcatcatttccaagaaaccagaagggtctccagtcactgagagggccatc
ccccttgccatcttccaagcagagcccactgtacggaaacattacctccggaaatggctg
aagagcccctcgctacaggacttcaacattcgtgcaatcctggactgggactactacatt
gagagactaggcagcaccatccagaaaatcattactattcctgcagctctgcagcaggta
aagaacccggtgccacgagtccggcaccctgactggctgcataagaaactcctggagaag
aacgatgtgtacaaacaaaaaaaaatcaatgaactcttcacttctgaaggcaagagacag
gtccttgccaatcagccccaggagggaacacccagctcacagattagtgacatagaggat
tttggggttgccaagacccttcagccatcaattcccattgcaaataaacggaagcgagtc
cctatggcagaggaaagccaacagatgtcccagagcctggagctatcccagtcctggcga
gagatcctgggcccacctccccccatgggtaccagcaaggagcagcacctggtgtggctg
cgctaccacaagaagaaatgggagctgcaggctcgacagcggcaggagcggcggaagagg
cggcgtctggaggatggcagggtggccacaggcggaggagtggtccgtgatgccctctcc
aaagggctgagcaactacctgcgtaggactgcgcggagcatcctggacttaccctggcag
attgtgcagatcactgagaccagccagccaggcctgtttaggctgtgggcggtgatcggg
agtgacctgcactgcatcaagctgagcatccccagggtgttctacgtcaaccagcgcatt
gcaaaaccagaggagggagcagtctacaggaaggtaaacaggatcctgccccgctcaaat
ttggtttacaacctatatgagtactccgtccctgaagatatgtaccaagagcatatcaac
gaaatcaatgctgacctctctgctccagacatcgagggagtatatgagactcaggtgccg
ctgctgttccgagccctcgtccacctgggctgcgtgtgcatggtcagcaggcagctcgtc
aggtacctgacagggcgagaggccgagacctttgacattgagcacctggagatgcgctca
ctggcccagttcacatacctggagccaggaagtattcgccatatctacctctaccacagc
tcccagggcaccaaggctctctttggccttttcatcccctcgcagcgcaaagccgcagtg
tttgtgctggacacggttcgcagcaaccagatgccaaacctcaccaacatgttctctgcg
gagcgcagtgcactgctggaaaaggtgggtgaagatctgctgcctccagacaagcacatc
tttgaagtgcgtgctgagaccgaccccaagaccatctacagagccatccagcgtctgctg
ctgggctacaaggatgagcgccggggccccacattgattgctgtgcagtctaactgggac
ctgaaacggctggcaagtgggattcccatcatcgaggagttcccgttggtacctgtccga
gtgacagatgacatcagctactcagtcctggactggcagcgccatgcagcccgccgcatg
atccgccactacctcaacctggatacatgcctgtcccaggcttttgaaatgagcaggtat
taccacattccaattgggaatctccctgatgatatctccacctttggctctgacctgttt
ttctcacgccacctccgtcgtcacaaccatttgctgtggctctcacccacggctcgccca
gacctggggggtaaggaggccgatgacaaccgtctcgtcatggagtttgatgagagagcc
ttggtggagataaacaaccctggctgctactccacagtatgtctggagctggacatccag
agcctggctgtaaacacagtgttgcaatctcatcatgtaaatgacatggaaggaggttcc
agcatgagcgtcagctttgatgtgattcagcaggcatccctggaagacatggtgacaggg
aaccaagctgccaacatcccagccagctatgatgaaactgccctctgttccaacacattc
aggattctgaagagcatggtggtgagctgggtgaaggagatcacgcagtatcacaacatc
tacgcagacaaccaggtcattcacttttaccgctggcttcgctctccttcttcactgctt
tacgacccagcattgcaccgtactctacacaacatgatgaagaagcttttcctacagtta
gtggctgagttcaagcgtcttggctcgtcagtggtttatgccaacttcaaccggatcatt
ctgtgcaccaagaagcggcgtattgaggacgctatcagctacatggagtacattatcaat
agcatccactcaaaggagatcttccactctcttactatttctttctcccgctgctgggag
ttcctgctatggatggatccagcaaattatggcggcatcaagggaaaagtgcattctcgc
atccactacagggagaaggataccagcaagaggcaagtgttggaggaggaagacagtgac
gaagaggaggaggtgggggaagaagaggaggaaggggaatcaaacgtggaggagctgctg
gagaacagctggaatattgtgcagttcctgccccaggctgcctcctgccagagctacttc
ctaatgattgtgtcagcctacatcgtggctgtgtaccacagcatgaaggaggagctgcag
cgcaatgcccctggaagcactcccgtcaagaggagaggcactagccaggtgtcccaagaa
gcactgcgtgagacaggggccatgcctggcatgatcacgttctcacaggattacgtggcc
aatgagctcactcagagcttcttcaccatcacccagaagatcaagaagaagatggctggt
tctcgtaatgccactgagccttcagacttgttcccagtgctgcctggctcctacttgcca
ctcaacaacccagctctagagttcatcaaatatgtttgcaaggtgctgtctctggatgcc
aacattaccaaccaggtgaacaaactgcgcagggacctgctgcgcctcatcgaggtgggc
gagttctcagatgaagcccagtttcgggacccttgccgctcctacgtactccctgaagtc
atctgcaggaactgcaacttctgcagggacctagacctgtgcaaggaccctgctctctcc
caggatggatcagtgctgcccagctgggtgtgctccaactgtgaggcgcagtatgactct
gactctattgaaatggcattggtagaagccctgcagaagaagctgatggccttcatgctg
caggacctggtgtgcaacaagtgtcgtggtgtgaaggacacacacatgcctgtgtactgc
agctgtgcaggagagtttgccctcaccatctcctcccagatcttcatggagcatatcgcc
atcttccagaacattgctcggcactacagcatggcctatctcctggagaccatcgagtgg
ctgctgcgtacaaacccccggctccagcagtga
DBGET
integrated database retrieval system
