Cygnus atratus (black swan): 118259760
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Entry
118259760 CDS
T09349
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03013
Nucleocytoplasmic transport
cata05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118259760 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118259760 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118259760 (NUP98)
03036 Chromosome and associated proteins [BR:
cata03036
]
118259760 (NUP98)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118259760 (NUP98)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118259760 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Peptidase_M26_N
Motif
Other DBs
NCBI-GeneID:
118259760
NCBI-ProteinID:
XP_035425403
LinkDB
All DBs
Position
1:complement(208160804..208198278)
Genome browser
AA seq
1815 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQPQTTSLFNKPFGQATTTQNTG
FSFGSTNTLGQPNTNTMGLFGATQPSQPGGLFGTAANTNAGTGFGTGTSLFGQTNTGFGV
GGSTLFGSKPAGFGTTTTSAPSFGTTTGGGLFGNKPTLTLGTNTNTSNFGFGANTAGNSL
FGNKPATGTLGTGIGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGF
GAPQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKK
LVLKNLNNSSLFSPVNRENEDLASPSEYPENGDRFFLSVPSDENHRQDGEREEEEDHHEV
TRFYTNPIAKPIPQTPENTVHKHQNNVDDTIVALNMRAALRNGLEGSSEDASFHDDSLQD
EREEETETMHHVHPAGIVLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYF
EGEVNLTNLNLDDIVHIRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLI
KSPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPL
KVDTKKLKTTPVPPPGHLPPQQMTLNGKPTPPSQTPEVEQLGRVVELDSDMADVTQELPQ
ESVLEDNVMEEQEAVPASTHIASTLGINPHVLQIMKASLLADEDDLDLILDHYPGKQPIK
MDTSQEICSPRLPISKAQGQKRCSVGGLLQSKFANVIFQSAGAAVQDFKGLRTSSSSPSA
ALWSAASPLASAFAVPPSVPEVQVKTVGVRRQQGLVPLDKSITHRKGKLLMDMALFMGRS
FRVGWGPNWTLINCGDQLSRSSEMEDTQCESVEYGFLPAPVAPKLLSESSFKVHVEKVSV
KQRKMDRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSVIHDYADWVRKASEDPAVT
ETVVKHWCLTWTLCEAIWGNLKGLDASLEEPSEYNLALERRRAFSRWLSETAAGRIDEEV
SLSRHDSHVEAVFSFLTGRRIGEACRLAQQSGDHRLALLLSQLAGSQPLRDLLTMQLVDW
HRLQADCFIQEERLRIFALLAGKPVWQLSERISINVCSQLDWKRCMAVHLWYLLPPTASI
SQALAMYESAFQNTPESEKYACCPLPPYLEGSGCVIEEDDNAGRPLRDVCFHLLKLYSDR
HYDLDQLLDPRSITSDPVDCRLSWHLWEVLRALNYTHLFKQGQGVLNASYAAQLESEGLW
EWAVFILLHEPDTHVREKAVRELLNRHCVLSETPESWAKETFLTKRLCVPAEWIHEAKAV
RARMEGDKHKEALFLFKAGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLSSPERSVL
IQDWEVAGLVYLDYIRVIEMVDRIQQLDCSAYELERLHTKVTSLCNRIEQIQCHNAKDRL
AQSDMAKRIANLLRVVLSLQHTPEPISDSTPAVQRVPLRLLAPHIGRLPMPEDYALEELR
GLTQSYLRELTVVTQ
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatccttcggaactccgtttggaggcagcactggctttgggacaacttca
acttttggacaaaatgctggctttggtactacgagcggaggagcgtttggcacctcagcc
ttcgggtcgaacaacaacaccggaggcctctttggcagcacacagacaaagccaggaggg
ttgtttggttcgactacgttcaatcagccagccacctcctccacaagtactggctttggg
tttgggacatcaactgggacgtcaaacagcctgtttggcaccaccagcaccggtggaggg
ctcttctcgtcccaaagcaatgccttcgcgcagaacaagcctgctggcttcggaaacttt
ggaacaagtaccagcagtggcggtctctttggaaccaccaacactacttccaatcctttt
gggagtacatctggctctctctttggcccaactagtttcactgctgctccaactggcaca
accattaagttcaatccaccaacaggtacagatactatggtaaaatctggagttagcact
aacattaataccaaacaccagtgcattactgctatgaaggagtatgaaagcaaatctctt
gaggagctccgtttagaagactaccaggcaaacaggaaaggcccctcaaaccctgtagga
gcaggagcaactgcaggattgtttgggtcttctacggctacgtcaagtacagctacagga
ctctttggctcttctactactaatacaggcttttcatacggacagaataaaactgctttt
ggaactagtacgactggctttggaacaggaacgacagggggtctttttggtcagcaacct
caaactacaagcctgtttaacaaaccttttggtcaagccacaacaacgcagaacaccggc
ttttcctttgggagtaccaacacactagggcagccaaacacaaacacaatgggtctcttc
ggggcaacccagccctcgcagcctggaggcctctttggaacagctgccaatacaaatgct
ggtactggatttggaacgggaactagtctttttggacaaactaacacaggatttggtgtt
ggcggttcgaccctgtttggtagcaagcctgctggatttggaaccaccacgaccagtgct
ccctcgtttggcacaaccactggcggcgggctctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggttttggtgccaacaccgctggaaatagttta
tttggaaataagcctgcaaccgggactctgggaactggaattgggacagggtttggaaca
gctcttggggcaggacagacttctttgtttggaaatacccagcctaaacttggtggaaca
ctgggaacaggagcatttggagcaccgggattcaatacatcaactgctactctgggcttc
ggagcccctcagcctgccgtagcgctgacagaccctaatgcatcagctgcccagcaggcg
gtccttcagcagcatctcaatagcttgacttactcacccttcggagattccccgctgttc
agaaaccccatgtcagatccaaagaagaaagaagagaggctgaaaccgacaaacccagca
gctcagaaggccttaacgacacccacccactacaaattgactccgcgtccagcgaccaga
gtgcgaccaaaagctttgcagtcagctggctctgctaaatcccagctcttcgatggtctt
gatgatgatgagccatccctatccaatggcgcgttcatgcccaagaagagcatcaaaaag
ttggttttgaagaatctcaacaatagcagtctgttctcacctgtcaatcgtgaaaatgaa
gacctggcttctccgtcagagtatccagagaatggagaccggttctttttgtcagtacct
tctgatgaaaaccacagacaagatggtgagcgagaggaagaggaggatcaccacgaagtg
accaggttttacactaaccccattgccaagcccatcccccagactcccgagaacactgtg
cacaaacaccagaacaacgtggacgataccattgtggctctgaatatgcgggcggccttg
cgaaatggtctggaaggcagcagtgaagatgcctcatttcatgacgattcccttcaagat
gaacgtgaagaggagactgaaaccatgcatcatgtgcatcctgcaggaattgttctaaca
agagctggctattacaccatcccgtctatggaggagctcgctagatttaccaacgacaga
aatgaatgtattgtgaccgacttcaccataggccgtaaaggttatggatcaatttacttt
gaaggagaagtaaatctaactaacttaaatctggatgacattgtacatatccgtaggaaa
gaagtgattgtttaccctgacgatgaaagaaaaccacctattggtgaaggtttaaataga
cgagctgaagttacattagatggagtttggcctacagataaaacatctcgttgcttgata
aaaagccctgaacgacttgcagagatgaattatgaaggtagactggagtctgtatctcgg
aagcagggcgctcgattcaaggaataccgcccggagaccggatcttgggtgtttaaggtg
gcacacttttccaagtacggcttgcaagattcagacgaggaagaggaagagcatccttta
aaagtggacacaaagaagttaaaaaccacacctgtgccacctccagggcatctgccaccc
cagcaaatgaccctaaatggcaagcccacgcctccatctcagaccccagaagtggagcag
ctgggcagggttgtggagctggacagtgacatggcagacgtcacccaggagcttccccag
gagtccgttctggaagataacgtgatggaagagcaggaggcagtgcctgcttcaacccat
attgcatcaacactgggtattaacccccacgtcttacagattatgaaagcttccttgctt
gctgatgaagatgacctagatttgatcctggatcattatcctgggaagcaacctataaaa
atggatacttctcaagagatctgttctccaaggctccctatttcaaaagcacaaggacag
aaaagatgctcagttggtgggctgctgcaatcaaaatttgctaatgtaattttccaatct
gctggcgctgccgtgcaagacttcaagggactgaggacttcaagcagttccccctctgct
gccctttggtcagcagcttctccgctagcatctgcgtttgccgttcctccgtcggtccca
gaggtacaggtgaaaacagtgggtgtccgcagacagcaggggctagtacctctggataag
tccatcacccacagaaaggggaagctgttgatggacatggcgctcttcatggggcgctca
tttcgtgttggctggggacccaactggacactcatcaattgtggagatcagttaagtaga
tcaagcgaaatggaagatactcagtgtgagtctgtggaatatggattcctgcctgctcca
gttgctcccaaattactctcagaatcttccttcaaggttcatgtggagaaagtgagcgta
aaacaaaggaagatggacagagacaaacagttgtatctcatccctctggagataaagctg
aaacacagcactgtccatatggatgagcagtgtcctcttctagcacccaatccaggagtt
tctgttatccatgactatgctgactgggttagaaaggcatctgaggatcctgctgtgaca
gaaactgttgtgaagcactggtgcttgacatggacgttatgtgaagcaatctgggggaac
ttgaaggggttggacgccagcctggaggaacccagtgaatacaacctagccctggaacgc
aggagagccttctctcgctggctgtcagagactgctgcgggacgaattgatgaggaggtc
tctttgtcccgacatgatagccacgtagaggccgtgttcagcttccttactgggaggaga
attggcgaggcttgcagactggcacagcagtctggtgaccaccggcttgctctgctcctc
tcccagctagcaggcagccagcccctccgcgacctcctcaccatgcagctggtggactgg
cacaggctgcaggcagactgcttcatccaggaagagagactgcgcatctttgcactgctt
gcagggaaacctgtgtggcagctctctgagagaataagtatcaacgtgtgctcgcagctg
gactggaagcgttgcatggctgtccatctctggtacctgcttcctccaacagcttctatt
tcccaggcccttgccatgtacgagtcagcgtttcagaacacaccagagtctgaaaaatat
gcctgctgccccctgcctccttacctagaaggttctggttgtgtaattgaagaagacgat
aatgcaggaagacctctgagagatgtctgtttccatttgttaaagctctacagtgacagg
cactatgaccttgaccagctgctggatccaagaagtataacatctgaccctgtggactgt
cgtctcagctggcacctgtgggaggtgctcagagccctgaactacacccacctcttcaag
caggggcagggagtgctgaatgctagctatgctgcccagcttgaaagcgaaggcctttgg
gaatgggctgtttttatactgctgcacgagcctgatactcacgtacgtgaaaaggcagtg
cgagaactcttaaatcggcactgcgttctgtctgagacacccgaatcgtgggccaaggag
acctttctgacaaaaaggctctgcgtccctgccgagtggattcatgaagcaaaggctgtt
cgagcaaggatggagggtgacaagcataaagaagccctcttcttgttcaaggctgggcac
tggaaccaatgtcacaagcttgttgtcaggcatttagcctcagatgctattattaatgag
aactacaagtacctaaaaggattcctggaagacctctcctctcctgaacgcagcgtgctc
atccaggactgggaggtggcagggctggtctatctagattacattcgtgttatcgagatg
gttgataggattcaacagctggattgctccgcatatgagctggagcgtttgcataccaaa
gtgacgtcgctgtgcaacaggatagagcagatacagtgccacaacgcgaaggaccggctg
gctcagtcagacatggccaagcgcattgctaacctgctcagggtggtcctcagcctgcag
cacaccccagagcccatctctgactccacccctgctgtgcagcgcgtcccccttcgcctg
cttgctccccacattggacggctgccgatgccagaggactatgccttggaggagctgcgt
ggtctcacccagtcttacttacgggagctgacagtagtgactcagtga
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integrated database retrieval system
