KEGG   Cygnus atratus (black swan): 118259772
Entry
118259772         CDS       T09349                                 
Symbol
XNDC1N
Name
(RefSeq) protein XNDC1N isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118259772 (XNDC1N)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cata03400]
    118259772 (XNDC1N)
DNA repair and recombination proteins [BR:cata03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     118259772 (XNDC1N)
SSDB
Motif
Pfam: XRCC1_N Zn-C2H2_12 zf_C2H2_6 zf-C2HC_2
Other DBs
NCBI-GeneID: 118259772
NCBI-ProteinID: XP_035425426
LinkDB
Position
1:complement(208110693..208115067)
AA seq 395 aa
MAPVRISFVVSFSSQDPRYPVENLLRGDGRRPWLSCPQDRSRQLRAELQLERASAIGYVD
VGNCGCAFVQVEVGRSSWPLGQPYVPLVPSVTLMTPAESRTGENRCGVRMFKEADFLALA
VGQKWDRLRLTCSQPFSRRGQFGLSFLRLRTPIDPEPDPRPAPEGAELTDSPWRCSPAFC
RTLSPEPRSSSREEEQLRSRLQQLEPGTASHAWSPARLSRPARMVLSAARSRAMKPRAST
STPGSSPELPAEDRGGPAAPGSTQDAPAPPKRVRRQPGSRQRAHSPAGRALPAPPGKPSA
GGRARAQARGRSEGQARAGGSGGESSGGEEVGLCPICSGCFSMALLPAHASRCGEDDSDS
DVEQPSSPGAWVPCPICELRFSPAEVERHASTCGE
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggccccggtgcgcatcagcttcgtggtgtccttctcctcgcaggacccccggtacccg
gtggagaacctgctgcgtggtgacggccggcggccgtggctcagctgcccccaggaccgc
agccggcagctgagagcggagctgcagctggagagagccagcgccatcggctacgtggac
gtcggtaactgcggctgcgccttcgtgcaggtggaggtggggcgctcctcgtggcccctc
ggccagccctacgtccccctggtgcccagcgtcacgctgatgacgccggccgagtcgagg
acgggcgagaaccgctgcggggtccggatgttcaaagaagcagatttcctggcgctggca
gtggggcagaagtgggaccgcctgcggctcacctgcagccagcccttcagcaggcgcggc
cagttcgggctctccttcctccgcctgcgcaccccgatcgaccccgagccagacccgcgc
ccggcaccggagggcgccgagctcaccgacagcccctggcgctgcagccctgccttctgc
aggactctgtccccagagccgcgctcgagctcgagggaggaggagcagctcaggagccgc
ctgcagcagctggagccgggcaccgcgtcccacgcctggagcccggcccgcctcagccgc
ccggccaggatggtgctgtcggcggcgcggagccgggccatgaagccccgagccagcacc
agcaccccggggagcagccccgagctgccggctgaggaccggggaggccccgcagcaccg
gggtccacgcaggacgcccctgcacccccaaagagggtccgcaggcagccgggcagcagg
cagagggctcacagccccgcaggcagggctctgccggctcccccggggaagcccagcgca
ggagggagagcccgagcccaagcccgcggccgcagcgagggacaggcaagggcaggcggc
agcggaggggagagcagcggaggggaggaggtggggctgtgccccatctgctcgggctgc
ttcagcatggcgctcctgcccgcgcacgcctcccgctgcggcgaggacgactccgactcc
gacgtggagcagccgtcctcccccggcgcctgggtgccctgccccatctgcgagctccgg
ttcagcccggccgaggtggagcggcacgccagcacctgcggggagtga

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