KEGG   Cygnus atratus (black swan): 118259917
Entry
118259917         CDS       T09349                                 
Symbol
ELL
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118259917 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cata01009]
    118259917 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cata03021]
    118259917 (ELL)
Protein phosphatases and associated proteins [BR:cata01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118259917 (ELL)
Transcription machinery [BR:cata03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     118259917 (ELL)
    Little elongation complex (LEC)
     118259917 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL RNA12
Other DBs
NCBI-GeneID: 118259917
NCBI-ProteinID: XP_035425694
LinkDB
Position
26:1763316..1815967
AA seq 608 aa
MAALQAERGYGLSCGRLGRGTRVSVFHVKLTESALRAFESYQACKDSVTSKPVIQFQGSQ
GHIAIPRPDRPAEARNFTFYLSNIGKDSPQGSFDCIQQYVSSNGNIHLDCLGSIQDKITV
CATDDSYQKARQSMAQAEEETRSRSAIVIKPGGRYVGKKVQVRKPAPGASDAVPSRKRPT
PVNLASAIKRGNSAISQRPFKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDNLLQ
QVANLSAKDSTFTLKDCVYKEVQKDWPGYSEGDQQLLKRILVRKLCQPQNSSGFQGEAPS
LSPPKDNVNSSSPPQKRSQPLEFIDPLANKKPRISHLAHRAQPAFNGKLNSSNGKDAPAA
ALPPALPESVSSSSSLPVLELPRPHDPLADVSNDLTHNGRDCETAEQADRLTHPLPTDCP
QTSKHNCSSYVKSKKKSKKHKDKEKERKEKKGEEKCKEEKQDCEVIKNADLVSVPQDVTG
LNGTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRR
FTQLDSKLKQLLQGSEEYKTIHDQILQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKKLI
AEYDQQQF
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggcggcgctgcaggcggagcgcgggtacgggctgtcctgcggccgcctcggccgcggc
acccgcgtctccgtcttccacgtcaagctcacggagagcgccctgcgcgccttcgagagc
taccaggcctgtaaggattctgtgacctcaaaaccagtaatccagtttcaaggaagtcaa
gggcacatcgcaattccgaggcctgatcgccccgcggaagcgcggaatttcacgttttat
ctttccaatatcggcaaggacagcccgcagggcagttttgactgcatccagcagtatgtg
tctagcaacggcaatatccacttggattgcctgggaagcatacaggataagatcaccgtg
tgtgctactgacgattcctaccagaaggcaaggcaaagcatggcacaggcagaggaggag
actcgcagccggagcgctatagtcattaaacctggggggagatacgtaggcaaaaaggtt
caggtgcgtaaacctgcaccaggagcttccgatgctgttccctccaggaagcgcccaacg
ccagtcaaccttgccagtgcaataaagagaggcaatagtgcgatttctcagagacccttc
aaagatagggttgtgcacttactggcactaaagccttataagaaacctgaacttattctc
agattgcagaaggatggactttctcagcaggacaaggatttgctggacaaccttctgcaa
caggtggcaaatttgagtgccaaggacagcactttcacactgaaagattgcgtatacaaa
gaagtgcagaaggactggcctggctactctgagggagaccagcagctgctgaagaggata
cttgttcggaaactctgtcagccacagaacagcagtggctttcaaggagaagcgccttcc
ctgagcccacccaaggacaacgtgaactccagctctcctcctcagaaacgatcccagccc
ctggagtttatcgatcccctggccaacaagaagcccaggatctcgcacctggctcacagg
gctcagcccgccttcaacgggaagctgaactcctccaacggcaaggacgcccccgccgcg
gcgctgccgccggccctcccggagtcggtgagctccagctccagcctgcccgtgctggag
ctgcccaggcctcacgaccccctcgcggatgtcagcaacgacctgactcacaacggcaga
gactgtgagaccgcggagcaggccgacaggctgactcaccccttgccgacagactgtccc
caaacgagcaagcacaattgcagctcgtacgtcaaaagcaagaaaaaatccaaaaagcac
aaagacaaggaaaaggagaggaaggagaagaagggcgaagagaagtgcaaagaggagaag
caggactgtgaagtaataaaaaatgctgacttagttagtgtgccacaggatgtcacaggt
ttaaatggaacatgcaataattctagtgtaccaacatcaacttcggaaatgccagattat
ttattaaaatacgcagccatttcctcttcggagcagcgtcagagttacaaaaacgacttc
aacgcggagtacaacgagtacagagacctgcacgctcggatagagaggataacccggcgg
tttacgcagttagactccaagctgaagcaacttttgcagggctctgaagaatacaagacc
atccatgatcaaatattacaggaataccggaaaattaaaaagactaaccccaattacagc
caagagaagaaccgctgcgaatacctccacaacaaactggctcacattaaaaaactgata
gcagagtatgaccaacagcagttctag

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