Cygnus atratus (black swan): 118260105
Help
Entry
118260105 CDS
T09349
Symbol
ITGA1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
cata04810
Regulation of actin cytoskeleton
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118260105 (ITGA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118260105 (ITGA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118260105 (ITGA1)
04810 Regulation of actin cytoskeleton
118260105 (ITGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118260105 (ITGA1)
04515 Cell adhesion molecules [BR:
cata04515
]
118260105 (ITGA1)
04090 CD molecules [BR:
cata04090
]
118260105 (ITGA1)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118260105 (ITGA1)
Cell adhesion molecules [BR:
cata04515
]
Integrins
Integrin alpha subunits
118260105 (ITGA1)
CD molecules [BR:
cata04090
]
Proteins
118260105 (ITGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
FG-GAP_2
vWA_SIBA-E
LYRIC
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
118260105
NCBI-ProteinID:
XP_035426006
LinkDB
All DBs
Position
Z:17628409..17708872
Genome browser
AA seq
1171 aa
AA seq
DB search
MAASCWMLTALLHLVVSSNVDVKNSMTFSGPLEDMFGYTVQQYENEEGKWVLIGSPLVGQ
PEKRTGDVYKCPVGKDNQSPCIKLNLPASTSVPNVMEVKENMTLGTTLVTNPKGGFLACG
PLYAYKCGRLHYTTGVCSNVSSTFETVEAIAPSVQECKTQLDIVIVLDGSNSIYPWESVT
AFLNSLLKNMDIGPQQTQVGIVQYGQTVVHEFYLNTYSTTEEVMAAATRIRQRGGTQTMT
ALGIDTAREEAFTEAHGARRGVQKVMVIVTDGESHDNYRLKEVIDSCEDENIQRFAIAIL
GSYSRGNLSTEKFVEEIKSIASKPTEKHFFNVSDELALLTIVEALGERIFALEATKDQQA
ASFEMEMSQAGFSAHYSQDWIMLGAVGAYDWNGTVLMVKDSGISIPTNDTFRDRFSEKNE
PLAAYLGYTVNSALTPGGVLYITGQPRYNHTGQVIIYKMEGKEVQVLQRLKGEQIGSYFG
GVITTVDINRDSFTDLLLVGAPMYMGTEKEEQGKVYVYALNKTKFEYQMSLEPVKQTCCS
PLKHDTCKVLKNEPCGARFGTAIAAVKDLNLDGYNDIVIGSPLEDDHRGAVYIYHGRGNT
INKKYTQRIASGGDGETVKFFGQSVHGEMDLNDDGLIDVTIGGLGGAALFWSRDVAEVNV
SMQFIPKSINIQQQNCQINKRKTICINATICFKTRLKSKEDIFESNLQYWVTLDSQRQIS
RSLFTETHERKMQKNITIKGSECIKHNFYMLDKPDFQDSVKVLLEFNFSDPESGPVLDSN
LPNSISEYIPFTKDCGAKNKCISDLVLNVKASIAGDSSSPFIVKSRNDKFTIQLSIKNKK
DSAYNTRALVQYSPNIIFAGIEDIQKDSCESNHNITCKVGYPFLKTAEEISFKISFQFNA
SYLLENATVDVYATSDSEEPPETLGDNRGQVTIPVKYEVGLIFVSVFKEHHVIIAANDTI
PTAINTTEQIGDEVTLHYRIEKGEHFPMPNLTLQILFPDVTSSKNTLLYLTALSHSQNAI
CRTSYPVDPLKISSGKPFVLPKIKEPTKDTIMDCDTYSCASINCALLPSDISQVNVSLRV
WKPTIIKATIHSLTLVVKALLRSENSSLILRNDHQKLETMIKISKELPPGSVPLWVILLS
IFAGLLILALLIFALWKAGFFKRPLKKKMEK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcctgctggatgctgacagctctccttcatctcgttgtctcttccaatgtt
gatgtgaaaaattcaatgaccttcagtgggcctctggaagacatgtttgggtacacagtt
caacagtatgaaaatgaggaaggaaaatgggtacttattggttctccattagttggccag
cctgagaaaagaacaggagatgtatacaaatgccctgtaggaaaggacaaccagtcgccc
tgcataaaactgaatttaccagcttctacttcagttcctaacgtcatggaagtaaaagaa
aacatgactcttggaacaaccttagtgactaacccaaaaggcggctttctggcttgtgga
ccactctatgcttataaatgtgggcgtttacattatacaactggagtttgctccaacgtc
agctccacttttgaaactgtggaggcgattgcaccgtctgtgcaagagtgtaaaacccag
ttggacatcgtcatagtccttgatgggtccaacagcatttatccatgggagagtgtcaca
gctttcctaaatagtctcctgaaaaacatggatataggtcctcagcaaacacaggttgga
attgttcagtatggacagactgtagtccacgaattttacctgaatacctactcaacaaca
gaagaagtgatggctgcagccacaagaatacgccagagaggtggcacacaaactatgaca
gcccttggaatagatacagcaagggaagaggcttttactgaggctcatggtgcacgaaga
ggagtacaaaaagtaatggttattgtgactgatggggaatcacatgataactacagattg
aaagaagtgattgatagttgtgaagatgaaaacattcaaagatttgctattgctattctt
ggcagctacagcagaggaaatttaagtactgagaaatttgtagaggaaataaaatcaatt
gccagtaagcctaccgagaagcatttcttcaatgtctctgatgaattggctcttctaact
attgttgaagcacttggagagagaatatttgccctggaagcaacaaaagaccagcaagca
gcctcatttgaaatggaaatgtctcaagctggtttcagtgctcattattctcaggattgg
atcatgcttggggcagtcggagcatatgactggaacggtacagtgctcatggtgaaggac
agtggtatttcaataccaactaatgacacctttcgtgacagattttcagaaaaaaatgaa
cctcttgcagcctatctaggctatactgtgaattcagcattgacacctggaggtgtgctg
tatataacaggacagccacgatacaatcacactggccaagttatcatttataaaatggag
ggaaaagaggtgcaagtacttcagaggttaaaaggagaacaaattggctcatactttgga
ggtgttattaccacagttgacatcaacagggactcttttacagaccttcttcttgttgga
gctcctatgtatatgggaactgaaaaagaggagcaggggaaagtgtatgtgtatgctctg
aacaagacaaagtttgaatatcagatgagtctcgaacctgtaaagcaaacatgctgttcg
ccgttaaaacatgacacctgcaaagttcttaagaatgagccctgtggtgcacgcttcggg
actgcgattgctgcagtgaaggacctcaatcttgatgggtataatgacattgtaatagga
tctcccttagaggatgatcatcggggagctgtttatatttatcatggccgtggcaacaca
atcaataaaaaatatacacagcgtattgcatcaggtggagatggggagacagtgaaattt
tttggccagtccgtgcatggagaaatggatttaaacgatgatgggctgattgatgtcact
attggaggccttggtggggctgccctcttctggtctcgtgatgtggctgaagtaaatgtt
tccatgcagtttatacccaaaagcatcaatatccaacagcaaaattgtcagataaataaa
agaaaaacaatatgtataaatgccacaatttgttttaagaccagactaaaatcaaaggaa
gatatatttgaatcaaatctgcagtattgggttactcttgactcacaaagacaaatatct
cgaagcttgttcacagaaacccatgagaggaaaatgcaaaaaaatataactatcaaaggg
tcagaatgtattaaacataacttctacatgttggataaacctgattttcaggactctgta
aaggttttgctggagttcaatttttctgatccagagagtggacctgttcttgacagcaat
ctgccaaattcaatatctgaatatattcctttcacaaaagattgtggagccaaaaataaa
tgcatttcagatcttgttctgaatgtaaaagcaagcatagctggagacagctcttctcca
ttcattgtaaagtcacgcaatgataagttcaccatccagctctctatcaagaataaaaaa
gacagtgcctataataccagagctttggtccagtactctccaaatattatttttgctggc
attgaggatatacagaaagatagttgtgaatctaatcacaatatcacctgtaaagtggga
tatccatttctaaaaactgcagaagagatttccttcaaaatatcattccaattcaacgca
tcatatcttctggaaaatgccactgttgatgtatatgcaacaagtgacagcgaagaacca
cctgagaccttgggtgacaacagaggacaagttacaattccagtaaaatatgaagtagga
ttaatatttgtaagtgttttcaaagaacaccatgttataattgctgcaaatgataccatc
cctactgctattaacacaacagagcagattggggatgaagttactctgcattataggatt
gaaaaaggtgaacactttccaatgccaaaccttacgctgcaaatcctatttcccgatgta
acatcttctaagaacactcttctctaccttactgcgttgtcacattcccaaaatgccatc
tgccgaactagttaccctgtggatcccttaaaaatcagctctggaaaaccgtttgtgttg
ccaaaaataaaagaacctacaaaggatacaattatggactgtgatacatacagctgtgcg
tctattaactgtgccctgctcccatctgacatatcacaagtgaatgtttcattaagagtg
tggaagcctaccatcattaaagcaactattcacagcttaacccttgttgtgaaagcctta
cttaggagtgaaaactcatcactgattttgagaaatgaccaccaaaaactagagaccatg
attaagatttccaaagaactcccacctggttcagtccccctatgggttatcctcctgagt
atctttgctggactcttgattcttgcactgcttatatttgctttgtggaaggctggattt
ttcaagagaccactaaagaagaaaatggaaaaatga
DBGET
integrated database retrieval system
