Cygnus atratus (black swan): 118260169
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Entry
118260169 CDS
T09349
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00260
Glycine, serine and threonine metabolism
cata00630
Glyoxylate and dicarboxylate metabolism
cata00670
One carbon pool by folate
cata01100
Metabolic pathways
cata01200
Carbon metabolism
cata01230
Biosynthesis of amino acids
cata01240
Biosynthesis of cofactors
cata04981
Folate transport and metabolism
Module
cata_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
118260169 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
118260169 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
118260169 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
118260169 (SHMT2)
Enzymes [BR:
cata01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
118260169 (SHMT2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
118260169
NCBI-ProteinID:
XP_035426134
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Position
29:619898..624584
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AA seq
500 aa
AA seq
DB search
MWPLRLGTALQRCAQLGAGSWRAQHGTAAAAAVGHLPGWTGQESLAESDPEMWSLVQKEK
DRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRAL
EAFDLDPARWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDVKRIS
ATSIFFESMPYKLDPATGLIDYDQLEVTARLFRPRLVIAGTSAYARLIDYARMKKVCEEV
KAYLLADMAHISGLVAAKAIPSPFEHADLVTSTTHKTLRGARSGLIFYRKGVRSVDKKTG
KETLYDLEDRINFAVFPSLQGGPHNHAIAAVAVALKQASSPAFRQYCQQVLRNAKAMAQA
LLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGL
RLGAPALTSRHFREEDFQKVVGFIDEGIALALDVKSKTSKLQEFKTFLLQDAETQRRLAE
LRQRVETFARAFPMPGFSDR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctctgcgcctgggcacggctctgcagcgatgcgcccagctgggtgctggcagc
tggcgagcgcagcatggcacagccgcagcagcagccgtcgggcacctgcctggctggaca
gggcaggagagccttgccgagagcgaccccgagatgtggtccctggtccagaaggagaag
gatcggcagtgccgagggctggagctcattgcctctgagaatttctgcagccgggcagcg
ctggaggccctgggctcctgcctcaacaacaagtactcggagggatacccgggcaagagg
tactacgggggagccgaggtggtggaccagatcgagctgctgtgcgagcagcgggctctg
gaggcgtttgacctggaccctgcccgctggggcgtgaatgttcagccctactcagggtct
ccggccaactttgcagcctacacagccctgctgcagccccacgaccgcctgatggggctg
gacctgcctgacgggggccacctcacacacgggtacatgtcagatgtcaagaggatctca
gccacgtccatcttctttgagtcgatgccctacaagctcgatccagccacggggctgatc
gactacgaccagctggaggtgacagcgcggctcttccgtcctcgccttgtcattgctggc
accagtgcgtacgcccgcctcatcgactacgctcgcatgaagaaggtgtgcgaggaggtg
aaggcgtacctgctggcggacatggcacacatcagcgggctggtggctgccaaggccatc
ccgtcaccctttgagcacgcggacctggtgaccagcaccacgcacaagaccctgcgtggc
gccaggtcaggactcatcttctatcgcaagggtgtgcgctcggtggataagaagacgggc
aaggagacgctctatgacctggaggacaggatcaacttcgccgtcttcccctccctgcaa
gggggaccccacaaccacgccatcgctgccgtagctgtggccctcaagcaggccagctct
cctgcgttccgccagtactgccagcaggtgctgaggaacgccaaagccatggcacaggcg
ctgctgcagcgcgggtacaccctggtgtcaggtggcaccgacaaccacctagtgctggtg
gacctgcggcccaagggcatcgatggtgcccgggccgagcgagtcctggagctcgtctcc
atcacggccaacaagaacacgtgcccaggggacaagagtgcgctcacgccgggagggctg
cgcctgggggcccccgcgctgacctcccgccacttccgcgaggaggatttccagaaagtg
gtcggattcatcgatgaaggcatagcgctggccctggatgtcaagagcaaaaccagcaag
ctccaggagttcaagaccttcttgctgcaggatgcggagacgcagcggcgcttggcagag
ctgcgccagcgtgtggagacctttgctcgtgccttccccatgcctggcttcagtgaccgc
tga
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