Cygnus atratus (black swan): 118260202
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Entry
118260202 CDS
T09349
Symbol
SMARCC2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118260202 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118260202 (SMARCC2)
03036 Chromosome and associated proteins [BR:
cata03036
]
118260202 (SMARCC2)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118260202 (SMARCC2)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118260202 (SMARCC2)
PBAF complex
118260202 (SMARCC2)
GBAF(ncBAF) complex
118260202 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
118260202
NCBI-ProteinID:
XP_050571935
LinkDB
All DBs
Position
29:complement(290203..299125)
Genome browser
AA seq
1252 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLSKLKDIVKRHQGTVTEDKSNASHVVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPANEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPLARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTETVKGKPELQQTSASQQMLNFPDKSKEK
PADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEP
ERIEESGTEEVRAEAQPAEEKKEAKEPRDGTAEEEVKEKLGDMAKKEEEKGKELEGEKES
DKGDSDGTGDLEKEKEAKEAQDEVPKEPLEPEAERKAKVERDIGEGNLSTAAAAALAAAA
VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
RQAFHMEQLKYAEMRARQQHFQHLQQQQQQQPPPLPPGAQPLPATGTPLAPAAHPLGAPP
APAMVAPAEPGGQPLPGVPPPQPPPPPGAPQPGPAIPHAPAPFPGQQPPSQSLAGSLGGS
GHPAVPGNAPAALPFGLSPSAIPFSMANPLAESIGATFPANPPALPLHGALASSMPPGGL
PPPPXPTRPGPAAPRGGLGCRAQPRHRGRRAGKPPSQPRPPRRSRPPPADGPHRAQPQHG
HPRPPHAVSPPRAEDAAPCAPPPQARGDRPLLPPQNPRGSPPNLTARFGIFL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtccgcctgtggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtgttcgggaagcacgtcagcaacgcgcccctcaccaagctgccgatcaaatgc
ttcttggatttcaaggcggggggagccctgtgccacatcctggcagccgcttataagttc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggatcgcaac
gtggagatgttcatgaccatcgagaaatccctggtgcagaacaactgcctggcccggccc
aacatcttcctgcaccaggagattgaacccaagctgctgagcaagctgaaggacattgtc
aagaggcaccagggcacggtgaccgaggacaagagcaatgcgtcccacgtcgtctgccct
gtccccgggaacctggaggaagaggagtgggtccggccggtcatgaagcgagacaagcag
gtcctgctgcactggggctactaccccgacagctacgacacctggatcccggccaacgag
atcgaggcctccgtggaggacgccccgacgccagagaagccccggaaggtccatgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggactacgaggtgacc
gacgagaagagccccctcgcccgcaggaagaagatctcagccaagacactgacggatgag
gtgaacagccccgactcggaccgtcgggacaagaaggggggcaactacaagaagaggaag
cgctcgccctcaccctcgcccacgccagaggccaaaaagaagaatgctaagaagggaccc
tccaccccctacaacaagtccaagcgcgggcaccgcgaggaggagcaggaggacctgacg
aaggacatggatgagccctcgcccgtccccaacgtggaggaggtcactctgcccaaaaca
gtcaacaccaagaaggactcggagtctgcgcccgtcaaggggggcaccatgacagacctg
gatgagcaggaggacgagagcatggagacagctggcaaggatgaggaggagaacggcacc
gggagcaagggggagcaggccaagaaccccgacctgcacgaggacaatgtgacggagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgagccctgcccgagttcttcaacggcaagaacaagtccaagacccccgaa
atatacctggcctaccgcaacttcatgatcgacacgtaccgcctgaacccgcaggagtac
ctcacctccaccgcctgccgccgcaacctggcgggcgacgtctgtgccatcatgcgggtc
cacgcgttcctggagcagtggggcctcatcaactaccaggtggacgctgagagccggccc
acccccatgggccccccgcccacctcccacttccacgtcctggccgacacgccctcgggg
ctggtgccgctgcagcccaagacgccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatcgaagacctcgtcaccgagacggtgaaagggaagccggag
ctgcagcagacctcggcctcacagcagatgctgaacttccccgacaagagcaaggagaag
ccggccgacatgcagaacttcggcctccgcaccgacatgtacaccaagaagaatgtcccc
tccaagagcaaagctgctgccagcgccacacgggagtggacagagcaggagacgctgctg
ctgctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccggacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccctac
ctggaggactcagaggcgtccctggggcccctggcctaccagcccatccccttcagccag
tccggcaaccccgtcatgagcaccgtcgccttcctggcctccgtcgtcgacccccgtgtc
gcctccgccgccgccaaatcggcgctggaggagttctccaagatgaaggaggaggtgccc
acggcgctggtggaggcgcacgtccgcaaggtggaggaggcggccaaggtgacgggcaaa
gccgaccctgcgttcgggctggagagcagcggcatcgccggcaccacctccgacgagccg
gagcggatagaggagagcggcacggaggaggtgcgggcagaggcacagccggcggaggag
aagaaggaggcgaaggagccccgggatggcaccgccgaggaggaggtgaaggagaaactg
ggggacatggccaagaaggaggaggagaagggcaaggagctggagggtgagaaggagtcg
gacaagggcgacagcgatggcacaggggacctggagaaggagaaggaggcgaaggaggca
caggacgaggtgcccaaggagccactggagcccgaggccgagcgcaaggcgaaggtggag
cgggacatcggcgaggggaacctctccactgctgctgctgctgcgctggctgcagctgct
gtgaaggccaagcacctggcagccgtggaggagcgtaagatcaagtcgctggtggcgctg
ctggtggagacgcagatgaagaagctggagatcaagctgcggcactttgaggagctcgag
accatcatggaccgggagcgcgaggcgctggaataccagcggcagcagctgctggcggac
cgccaggccttccacatggagcagctgaagtacgcggagatgcgcgcccgccagcagcac
ttccagcacctgcagcagcagcagcagcagcagccgcccccgctgccgcctggggcccag
cccctgcccgccaccggcacccccctggcccccgccgcccacccgctgggcgcgccgccc
gccccagccatggtggcccccgccgagcccggggggcagccgctgcccggggtccccccg
ccgcagccgcccccgccaccgggcgccccgcagcctggcccggccatcccgcacgccccg
gcgccgttccccgggcagcagccgccgtcccagagcctggctgggagcctcggtggcagc
ggccaccccgccgtgcccggtaatgcgcccgcggccctgcccttcggattgtctccatcc
gccatcccatttagcatggctaaccccctagccgagtccatcggggccaccttccccgct
aacccgcccgccctcccgctgcatggggccctggccagcagcatgccgcccggggggctg
ccccccccgcctnaacccacccggcctggccctgccgcacctcgcggggggctcggctgc
cgcgcacagccccgccatcgtggccgccgtgcagggaagcctccttcccaaccccggcct
cctcgcagatcaaggcccccccctgcagacggaccccatcgcgcccagccccagcacggc
cacccccgtcccccccacgcagtgagcccccccagggccgaggacgctgcaccctgcgcc
cccccgccgcaggcccggggagaccggcccctcctgcccccgcaaaaccccagaggaagc
ccccccaacctcaccgcccgctttggtatttttttatga
DBGET
integrated database retrieval system
