Cygnus atratus (black swan): 118260217
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Entry
118260217 CDS
T09349
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118260217 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118260217 (SMARCD1)
03036 Chromosome and associated proteins [BR:
cata03036
]
118260217 (SMARCD1)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118260217 (SMARCD1)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118260217 (SMARCD1)
PBAF complex
118260217 (SMARCD1)
GBAF(ncBAF) complex
118260217 (SMARCD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
118260217
NCBI-ProteinID:
XP_035426216
LinkDB
All DBs
Position
29:1714490..1721913
Genome browser
AA seq
512 aa
AA seq
DB search
MAARAGFQSVTPSGGGGGAAAGAGALGPGAPGGPVRMGPAPGQGLYRSPLPGAAYPRPGM
LPGSRLAPQGPSMGPPGYGGSPAVRPGMAQASLDQARKRPAPQQLQQVQPQAVPNRNHNA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLAR
LLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggcttccagtcggtgactcccagcggtggcggcgggggggccgct
gccggggccggggccctggggccgggagctccgggggggccggtccgcatgggcccggcc
ccgggacagggcctgtaccgctcgccgctgccgggggccgcctacccgcgccccgggatg
ttgccgggcagccggctggccccgcaggggccttccatggggccgcccggctacggcggg
agcccggcggtgcggcccgggatggcgcaggccagcctggatcaggcccgcaagaggccg
gcgccgcagcagctccagcaggtgcagccgcaggccgtgcccaaccgcaaccacaacgct
aaaaagaaaaagatggctgacaaaattctacctcagaggatccgtgagcttgtccccgag
tctcaggcctacatggacttgctggcctttgaaaggaaattggaccagacgatcatgagg
aaacgcctggatatccaggaggccttgaagcgacccattaagcaaaagcgaaagctacga
atttttatctccaacaccttcaatccagccaagtcagatgcagaagatggagaaggaaca
gttgcctcctgggagcttcgggtggaaggccggctgctcgaagattctgctttgtccaaa
tacgatgccaccaagcagaaaagaaagttttcatccttctttaaatctctggtcattgaa
cttgacaaagacctctatggccctgacaatcacctggtagagtggcacaggactgcaaca
acccaggagacagacggcttccaggtgaaaaggccaggagatgtcaatgtgcgctgtact
gtccttctgatgctcgattaccagcctccccagttcaaactggacccccgcttggctcgt
ctcctggggattcacactcagacccgtccagtgatcatccaggctttgtggcaatatatc
aagacccacaagctccaggacccccacgagcgggagtatgtcatctgtgacaaatacctc
cagcagatatttgaatctcagcggatgaagttctctgaaatcccacaaaggcttcacgca
ttgcttatgcccccggaaccgatcatcatcaatcatgtgatcagcgttgacccaaatgac
cagaagaaaacagcctgctatgacatcgatgtggaggtggatgataccttgaagactcag
atgaattcattcctgctctcgacagctagtcaacaggaaattgctgctctggataacaag
atccatgaaacaatagagacaattaaccagctgaagacccagcgtgagttcatgctgagt
tttgcccgagatcctcagggcttcatcaacgactggctgcagtcccagtgccgggacttg
aagacgatgactgatgttgttgggaatcctgaagaggagcgtagagctgagttctacttc
cagccgtgggcccaggaagctgtgtgcagatacttctactccaaggtacagcaaagacgg
caggaactagagcaggccctgggaatccgcaacacatag
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