Cygnus atratus (black swan): 118260786
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Entry
118260786 CDS
T09349
Symbol
TNPO3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03013
Nucleocytoplasmic transport
cata03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118260786 (TNPO3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118260786 (TNPO3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cata03016
]
118260786 (TNPO3)
Transfer RNA biogenesis [BR:
cata03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
118260786 (TNPO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
118260786
NCBI-ProteinID:
XP_035427141
LinkDB
All DBs
Position
1:complement(1155329..1180607)
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AA seq
925 aa
AA seq
DB search
MEGGGAKPSLQLVYQAVQALYHDPDPSGKERASCWLGELQRSVHAWEISDQLLQIRQDVE
SCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQ
MASWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSS
TVVSLLMTCVEKAGNDEKMLIKIFRCLGSWFNLGVLDSTFMANSKLLSLLFEVLQQDKTS
SNLHEAASDCVCSALYAIENVETNLPLALQLFQGVLTLESAYHMAVAREDLDKVLNYCRV
FTELCETFLDKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTDD
AVIHSIFKAYIQRLLHALARHCQLDSDHEGVPEETDDFGEFRMRVSDLVKDLIFLVGSVE
CFAQLYATLKDGNPPWEVTEAVLFIMASIAKSVDQENNPTLVEVLEGVVRLPETVHTAVR
YTSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCDRRLASAAAKAIHNICSVCRDHMAQHF
NGLLEIARSLDSFTLSPEAAVGLLKGTALVLARLPLEKIAECLSELCAVQVMALKKLLSQ
EPSNGLSSDPTVPLDRLAVIFRHTNPIVENGQIHPCQKVIQEIWPVLSETLNKHSADNRI
VERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYRAHQHSCFLYLGSILVDEYGMEEGCR
QGLLDMLQALCIPTFQLLEQPNGLQNHPDTVDDLFRLAARFIQRSPVTLLRSQVMIPILQ
WAIAATTLDHRDANCSVMKFLRDLIHTGVANDHEEDFEVRKELIGQVMNQLGQQLVNQLL
HTCCFCLPPYTLPDVAEVLWEIMQIDRPTFCRWLENSLKGLPKETTGGAIQVTHKQLTDF
HKQVTSAEECKQVCWALRDFTRLFR
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggcggggccaagcccagcctgcagctggtctaccaggccgtgcaggccctc
taccacgaccccgaccccagcggcaaggagcgggcgagctgctggctgggagagctgcag
cgatcggtgcacgcctgggagatctcggaccagctgctgcagatccggcaggatgtggag
tcgtgctacttcgcggcgcagaccatgaagatgaagatccagacgtccttctacgagctc
cccaccgactcgcacgcctccttacgggactccttgctctcccacatccagaacttgaaa
gacctctcgccggtcatcgtcacccagcttgcgttagcgatagcagaccttgccctgcag
atggcttcttggaaaggctgcgtgcagacactggttgaaaagtacagcaacgacgtcacg
tcgctgcccttcctgctggagatcctcacggtgctgccggaggaggtccacagccggtcc
ttgcgcatcggggccaaccgccgcaccgagatcatagaggacttggcttactactccagc
acggtcgtctcgctgctgatgacgtgcgtggagaaggcgggcaacgacgagaagatgctc
atcaaaatcttccggtgcctggggagctggttcaacctgggcgtcctggacagcaccttc
atggccaacagcaagttgctgtcgctcctcttcgaggtgctgcaacaggacaaaacctcg
tcaaacctccacgaagctgcttcggactgcgtgtgctcggccctctacgccatcgagaac
gtggagaccaacctgcccctggccctgcagcttttccagggcgtcctcaccctggagagt
gcctaccacatggccgtggcgcgggaggacttggacaaggtgctcaattactgccgtgtg
ttcactgagctctgcgagaccttcctggacaagatagtctgcacgccgggccaagggctg
ggcgacctgcgcacgctggagctgctgctgatctgcgcgggccacccgcagtacgaggtt
gtggaaatctccttcaacttctggtaccggctgggggagcacctgtacaagacggacgac
gccgtgatccacagcatcttcaaagcctacatccagcgcctgctccacgcgctggccagg
cactgccagctcgactcggaccacgagggcgtccccgaggagacggacgacttcggggag
ttccggatgcgggtctcggacctggtgaaggacctcatcttcctggtggggtcggtggag
tgcttcgctcagctctacgccactctgaaggacgggaacccgccctgggaggtgacggaa
gctgtcctcttcatcatggcctccatcgccaagagcgtcgaccaggagaacaacccgacg
ctggtggaggtgctggagggagtggtgcggctccccgagacggtgcacacggccgtgcgc
tacaccagcatcgagctggtgggggagatgagcgaggtggtggacaggaacccgcagttc
ctggatcccgtgctgggctacctgatgaaggggctgtgcgaccggcgcctggcctcggcc
gccgccaaggccatccacaacatctgctccgtgtgccgggaccacatggcgcagcacttc
aacgggctgctggagatcgcccgctccctcgactccttcacgctctctccggaggctgcc
gtggggctcctcaaggggaccgcgctggtgctggccaggctgcccctggagaagatcgcg
gagtgcctcagcgagctctgcgccgtgcaggtgatggcgctgaagaagctgctctctcag
gagccgagcaacggcctctcctcagaccctacagtgcccctggaccgactcgccgtcata
tttaggcataccaatcccattgtagaaaatgggcagatccacccgtgccaaaaagtcatt
caggagatctggcccgtgctgtcggagaccctgaacaaacacagtgccgataaccgcatc
gtggagcgctgctgccgctgcctgcgcttcgccgtccgctgcgtgggcaaaggctcggcc
gcgctgctgcagccgctcgtcacgcagatggtgaacgtgtaccgggcgcaccagcactcc
tgcttcctctacctgggcagcatcctggtggacgagtacggcatggaggagggctgccgg
caggggctgctcgacatgctgcaggcgctctgcatccccaccttccaactcctcgagcag
cccaacggcctccagaaccacccggacactgtggacgacctcttccgactcgcagccagg
ttcatccagcgcagccccgtcaccctgctgcgcagccaggtgatgatccccatcctgcag
tgggccatcgccgccaccaccctggaccaccgggacgccaactgcagcgtcatgaagttc
ctgcgcgacctcatccacaccggggtggccaacgaccacgaggaggacttcgaggtgcgg
aaggagctgatcgggcaggtgatgaaccagctgggccagcagctcgtcaaccagctgctg
cacacgtgctgcttctgcctgcccccctacaccctgcccgacgtcgccgaggtgctctgg
gagatcatgcagatcgaccgaccgacgttttgtcgctggctggagaattccctgaagggc
ttaccaaaggagacgacggggggagccatccaggtcacacacaagcagctgacagacttc
cacaagcaggtcacgagcgccgaggaatgtaagcaggtctgctgggctctgagggacttc
acccgcctcttccgatag
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