Cygnus atratus (black swan): 118260892
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Entry
118260892 CDS
T09349
Name
(RefSeq) collagen alpha-1(XV) chain-like
Organism
cata
Cygnus atratus (black swan)
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Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
118260892
NCBI-ProteinID:
XP_035427337
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Position
25:complement(1444588..1450945)
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AA seq
710 aa
AA seq
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MGSGDPQSLLHTLCILWVLAGRLPPGTAQWFYPLGSEDTTPEPGTSPTAPTLPTLDGEED
EDAGEVEPTRKVLLSKPPLAAGPRRREPPSRGAAKGPGHAPSRARAQHNRPTAAPQIFEG
SAEEEEFLQIKSTAKGLPPQVPPAPKMDTALQIHNGSSCVCPVRPGPPGPKGEKGDRGSP
GDRGQPGLSGERGKTGSPGQPGHQGPRGPPGPPGPPGPPGPPGAWGARSPPASAALPKGS
ENEGEKGEHGLPGMPGSPGRTGEMGSPGMPGPMGPPGPPGDYRCESRHGGHHGSAGPPGP
KGEKGDPGERGCCYGEHGCKPGHLPFHGTGSQSSSWVPISGYQTHSKEETEVYGAIIPHG
PRGPPGNPGPPGPPGPPGAPGLLYLNRVYPIRTQLPCKEPAAADAGWAADADASRTEPPE
PRADLRRQTWVFRSKELMLKSGSAVPEGSLVYVREGSSAFLRTPRGWSRLLLEDSESLFA
GDDPSASTPQYQEAKRVQTRGPNTEPPAGAQTDSLVLKEEGPGLPRILPTTVAPRMPSLR
LVALNVPLSGDMSGIRGADLQCYRQSQEAQLYGTFRAFLSAPTQDLASIVKRTDRALPVV
NLKGQLLARSWSSLFEGSAGAAPRGPIYSFNGRNVLTDALWPRRLAWHGSTARGSQARRR
DCQGWRSSGPGEGLAAPLGEGKLLAGQRHNCSEELVVLCVEVAFPYRHMW
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggggtccggggacccccagagcctcctccacaccctctgcatcctctgggtgctggcc
gggcgcctgccccccggcacagcccagtggttttaccccctgggctccgaggacaccacc
ccggagccaggcaccagccccacggcccccacgctgcccaccctggatggggaggaagat
gaagacgctggcgaggtggagcccacgaggaaggtgctgctgagcaagcccccgctggcg
gcgggccccaggagacgggaacccccctccaggggcgcagccaaaggtccgggccatgcc
ccatcgcgtgcacgagcccagcacaaccgccccacggccgccccgcagatcttcgagggg
agcgcggaggaagaggagttcctgcagatcaagagcacagcgaaggggctgcccccgcag
gtgcccccggcccccaaaatggacacagctctccagattcacaacggctccagctgcgtc
tgccccgtgcgtcctggccctcctggcccgaagggagagaaaggtgaccgggggtcccca
ggagacagaggccagccggggctttctggggagagagggaagacgggcagcccagggcag
ccaggtcaccaggggccccggggcccccctggtcctccgggaccaccggggccaccggga
ccaccaggtgcttggggagccaggagccctcctgcctccgctgccctccccaagggatca
gagaacgagggtgagaagggcgagcacgggctgccaggcatgccggggagccccggccgg
acgggagagatgggctccccgggcatgcctggtcccatggggccaccggggccaccgggg
gactacaggtgcgagtcacgccacggagggcaccatggatctgccgggccgccgggcccc
aagggtgaaaagggtgacccaggagagcgggggtgctgctacggggaacacgggtgcaaa
ccgggccacctccccttccacggcaccggcagccagtccagctcctgggtgcccatcagt
gggtaccaaacgcacagcaaagaggagacggaggtttatggagcaatcattccccacggt
cctcgaggtccccctgggaaccctggcccccccggcccgcccggtccccccggagctccg
ggtctcctctacctcaacagggtgtaccccatccgcacccagctgccctgcaaggagccg
gcagcagctgacgcaggctgggcagcagatgctgacgcctctcggacagagccgccggag
ccccgtgctgacctccggcgccagacgtgggtcttcaggtccaaggagctgatgctgaag
tcgggcagcgccgtccccgaggggagcctggtctacgtgcgagaagggagcagcgccttc
ctgcgcacccccaggggctggagcaggctcctgctggaggactcggagtcgctctttgct
ggtgacgacccctctgcctccacgccgcagtaccaggaggcgaagcgggtacagacgcgg
ggtcccaacacagagccccccgcgggagcccagacagactcgctggtcctgaaggaagag
ggaccggggctgcccaggatcctgccaacaaccgtcgcccccaggatgccttctctccgc
ctggtggccctgaacgtgcccctctccggggacatgagcggcatccgtggcgccgacctg
cagtgctaccggcagtcgcaggaggctcagctctacggcactttccgggctttcctctcg
gcccccacgcaggacctggcctccatcgtcaagaggacggacagggccctccccgtggtc
aacctgaagggccagctgctggccaggtcctggagctccctctttgagggctcggccgga
gcggccccacggggccccatctacagcttcaacggccgcaacgtcctgaccgatgccctc
tggcctcgcaggctggcatggcatggatccacggcccggggcagtcaagcccgcaggcgg
gactgccagggatggcgaagctccggccccggggagggcttggcggccccgctgggcgag
ggcaagttgctggcagggcagcggcacaactgctccgaggagctggtggtgctgtgcgtg
gaggtggccttcccctaccgccacatgtggtga
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