Cygnus atratus (black swan): 118261254
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Entry
118261254 CDS
T09349
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118261254 (DHX34)
Enzymes [BR:
cata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118261254 (DHX34)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
118261254 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_16
AAA_22
nSTAND3
ATPase
Motif
Other DBs
NCBI-GeneID:
118261254
NCBI-ProteinID:
XP_035427894
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MEPEPGPAPGGAPRPYRWDWDCPAARRRLEELYFPWRACPEESRGFWAFFERLRRFQSRR
PEREPVWDSDEDQPPARRLGLPRRYHPRHRVNLAVPSPEPSPGHPWVPREALKEFLDALL
LYLDFGQKRSFAKLAKLQREREALPIARARRRLLRAVAENQVVVVAGDTGCGKSTQVPQF
LLAAGYRRVACTQPRRIACVSLAKRVAFESLQQYGDQVGYQIRFESSRSPATSIVFLTEG
LLLRQAQREPALPAYEVIIADEVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRL
FSDYFGGAPVLQVPGRIFPISVIYEPIPKEEVAAAAGKPERLDPRPYLRVLQAIDHKYPP
EERGDLLVFLSGVAEIGAVQEAAQVYAAHTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRK
CILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRT
GPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPAASLE
TAVRYLREQGALDEAEELTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQ
SPFLRLSNANPDCATARRPLESPHGDPLTLLNAFNEWVQVKSERGGSSRKWCRRRGLEEH
RLYEAANLRRQFQELLRDHRLLEAAPSRPSDSYSRQSRHRERRELHRLCRRHAETQGRRR
KVLRLQDGTAGSSGEEEEGAGAHEPGERSVDIQDVKFKLRHDMDELQAVSGSVLSLSQLA
LLKLVLCRGLYPQLAVPDALNNSRKDSDQIFHTKSKQGVVLHPSCVFATSPELLHAKEGK
ERGGTKEDGLSRHHQLLAFVSLLETTKPYLVNCIRVPALQALLLFSRSLDTNADCTRLVA
DGWLELTLPDAAAALRFLAAALQLRASWEKLLDQQLDPGGDEPSSRDLSALKRGLLEFLG
MEAPYRLRQLTGLEKQTLYVGPQTVPAAPQLPGLFQGTELKPDEVKGGHRVTEFLTYNCL
ATDTDLYSECLRSFWTCPHCGLHMPFTPLERMCHESTCQPSEAPPEEEAGSSSKTSALHR
LYHCDICQQDFTLTPTDILRHKKQHQ
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagccgggccccgctcccggtggggccccgcggccgtaccggtgggactgg
gactgcccggcggctcggcgcaggctggaggagctctacttcccctggcgggcctgcccc
gaggagagccgcggcttctgggccttcttcgagcgcctgcgccgcttccagagccgccgg
ccggagcgggagccggtgtgggacagcgacgaggaccagccacccgcccgccgcctcggc
ctgccgcgccgctaccacccccggcaccgcgtcaacctggcggtgccgagccccgagccg
tcaccgggccacccgtgggtgccccgggaagccctgaaggaattcctcgacgccctcctg
ctctacttagacttcggccagaagcggagcttcgccaagctggccaagctgcagcgggag
cgcgaggcgctgcccatcgcccgggctcgccggcggctcctgcgggccgtggctgagaac
caggtggtggtggtggccggcgacaccggctgcggcaagtccacgcaggtgccgcagttc
ctgctggccgccggctaccgccgcgtggcctgcacccagccgcgccgcatcgcctgcgtc
tcgctggccaagcgggtggccttcgagagcctgcagcagtacggcgaccaggtgggctac
cagatccgcttcgagagcagccgctcgcccgccaccagcatcgtcttcctgaccgagggg
ctgctgctgcggcaggcgcagcgggagccggcgctgcccgcctacgaggtgatcatcgcc
gacgaggtccacgagcggcacctgcacggagatttcctcctgggggtcctgcggcgcctg
ctccccgcccggcccgacctgaagctggtgctgatgtcggccaccatcaacatccgcctc
ttctccgactatttcgggggcgcccccgtgctgcaggtgcccgggaggatcttccccatc
tcggttatctacgagcccatccccaaggaggaggtggcggcggcggcggggaaaccggag
cgcctggacccccggccctacctgcgggtgctgcaggccatcgaccacaaataccccccg
gaggagcgcggcgacctcctggttttcctcagcggggtggccgagatcggcgccgtgcag
gaggcggcgcaggtctacgccgcgcacacgcagcgctggatcgtgctgcccctgcacagc
accctctccgtcagcgagcaggataaggtgtttgacgtgccacctcccggcgtccgaaag
tgcatcctcgccaccaacatcgccgagacctcggtgaccatcgacggcgtgcgcttcgtg
ctggattcggggaaggtgaaggagatgagctacgacccccagggcaagctccagcgcctg
caggagttctggatcagccgggcgagcgccgagcagcggaagggacgcgcgggcaggacg
gggcccggtgtctgctaccggctctacgccgaatccgactatgacgccttttccccctac
cccgtgccggagatccagcgggtcgcgctcgatgctctggtcctccaggtaaaaagcatg
gggctgggcgacccccggaccttccccttcctggagccccctcccgcggccagcctggag
acggccgtgcgctacctgcgggagcagggggccctggacgaagccgaggagctgacgccc
atcgggacgctgctggcccagctgcctgtggacgtggtggtgggcaaaatgctggtgctg
ggcgcgcttttcgggctggccgagcccacgctgacggtggcggcggcgctgagcgtgcag
tcgcccttcctgcgcctctccaacgccaaccccgactgcgccaccgcccggcggcccctc
gagagcccccacggggaccccctgacgctgctcaacgccttcaacgagtgggtgcaggtg
aagtcggagcgcggcggcagctcgcgcaagtggtgccggcggcggggcttggaggagcat
cggctctacgaggctgccaacctgcggcggcagttccaggagctgctccgagaccaccgg
ctcctggaggcggcccccagccggcccagcgacagctacagccggcagagccggcaccgg
gagcgccgcgagctgcaccggctctgccgccgccacgccgagacgcagggacggaggcgc
aaggtgctgcggctccaggacggcaccgctggctcctctggcgaggaagaggaaggagcg
ggcgcccacgagcccggtgagcgcagtgtcgacatccaggacgtcaagtttaagctccgc
cacgacatggatgagctgcaggccgtgtccggctcggtcctatcgctctcgcagctcgcc
ctgctcaagctggtgctgtgcaggggcctctacccgcagctggccgtgcccgacgcgctc
aacaacagccgcaaggactcagatcagattttccacaccaagagcaagcagggcgtcgtg
cttcacccgtcctgcgtcttcgccaccagcccggagctgctgcatgccaaggaggggaag
gagcgcggcgggaccaaagaggacgggctgagccgccaccaccagctcctcgccttcgtc
tcgctgctggagaccaccaagccctacctggtcaactgcatccgcgtgccggcgctgcag
gccctgctgctcttctcccgctcgctggacaccaacgcggactgcacgcggctggtggcg
gacggctggctggagctcaccctgcccgacgccgccgccgccctgcgcttcctcgccgcc
gccctgcagctccgagcctcctgggagaagctcctggaccagcagctggaccccgggggc
gacgagcccagctccagggacctctctgcgctcaaacgggggctgctggagttcctgggg
atggaggcgccgtaccgcctgcgccagctgacggggctggagaagcaaactctctacgtc
ggcccccagaccgtgcctgcggccccccagctcccggggctcttccagggcaccgagctg
aaacccgacgaggtgaaaggtggccacagggtgaccgaattcctcacctacaattgcctg
gccacggacacagacctctacagcgagtgcctgcggagcttctggacgtgtccccactgc
ggtctccacatgcccttcacccccctggagcgaatgtgccacgagagcacctgccagccc
tccgaggcccccccggaggaagaggctgggagctcttcaaaaacctccgccctgcaccgg
ctctaccactgcgacatctgccagcaggacttcaccctcacgcccaccgacatcctccgg
cacaagaagcagcaccagtga
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