Cygnus atratus (black swan): 118261377
Help
Entry
118261377 CDS
T09349
Symbol
NOTCH3
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04330
Notch signaling pathway
cata04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118261377 (NOTCH3)
04371 Apelin signaling pathway
118261377 (NOTCH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
Notch
NODP
NOD
EGF_2
Ank_3
Ank_4
Ank_5
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118261377
NCBI-ProteinID:
XP_035428093
LinkDB
All DBs
Position
30:complement(2659..35065)
Genome browser
AA seq
2195 aa
AA seq
DB search
MGRAPGGLPGLVLLLLHLGAAAVLPCPEGTNPCENGGQCVLHPNGRTACLCRPGALGERC
QLRDPCVPSPCAHGGLCQSTLHDGALSHLCLCPPGFRGPSCSLPDPCTPLPCLNGGTCRP
LGEGGFECSCLPGFTGQGCDTNVDDCPGHKCQNGGTCVDGVNTYNCQCPPEWTGQFCTED
VDECQLQPNACHNGGTCFNSPGAHVCVCVNGWTGESCADNIDDCATAVCFHGATCHDRVA
SFYCACPMGKTGLLCHLDDACVSNPCHEDAVCDTNPVNGRAICTCPPGFTGGACDQDVDE
CSIGANPCEHFGRCVNTQGSFECRCGRGYAGPRCESDVNECLSGPCRNQATCLDRIGRFT
CICMAGFSGPLCELEVDECQSSPCANGGRCTDLVNGFACSCPPGFSGPTCQTDMDECAST
PCQNGAKCIDRPNGYECRCTEGFEGALCERDADDCTPDPCHHGTCVDGIASFSCACAPGF
TGYRCELQLDECHSQPCRHGGKCIDRIASYQCNCPPGTAGVNCEVNPDDCASDPCVHGVC
QDGIGRYDCVCQPGFTGPRCNVEINECASNPCHDGGTCVDGANGFTCLCPPGTRDAQCRP
GTLPCHSSPCVHGTCRDHGDGFSCECEPGWGGPTCAQRGDACASRPCRHGGTCTPLGGGY
RCACRQGYQGRACEVVLAPCAPDPCDNGGTCAPTADYGGFTCRCPPGWQGERCQEDVDEC
GASPCQHGGTCANRPGTFGCLCPPGYGGGVCEHDLDDCDPDPCLNGGSCRDGVGAFTCAC
PPGFTGPRCGTEVDECRGGPCRNGGTCTDYVNGFACACPPGWTGPRCQHDVPDCTDSSCF
NGGTCVDGVASFSCRCPPGFTGAHCQYPADGCRGQPCQRGGTCVAAGGSYRCLCPPGYTG
AQCQTLQDLCQPPPCHNGGRCQQEGGAITCHCPPGWAGTHCDVPNVSCAVVAARRGVPVS
HVCHGRGRCVPAGGGHRCLCQGGFGGPYCQTPLDPCQHNPCRHGAACRSFVGGYHCECPP
GYTGQDCELEVAECQSQPCQHGGTCIDLPGGYLCSCPPGTLGVLCEINEDDCAGGPGCQH
NGTCVDAVGGFTCACPPGFGGARCEGDVNECRRHPCHPRHSRACVQGDNSYRCLCRPGYT
GHRCQSPVNACESQPCRHGGGCQPTPDTPPGFTCRCPPGFGGPQCERRAPSCRHLSCANG
GHCQPPPAGPRCVCPPGFGGPECQQRVPPPQKNTTCPASPCLHGGTCAPSPRPPFARCLC
PPGFGGAWCQEETPATPPXRPDGCPLGGGCEELGGDGVCDRHCNTAGCGWDGGDCSLRVG
DPWRHCAPPQCRGLFGNGRCDGGCDTPQCLYDNFDCRPPHRACNPLYAQYCSDHFADGRC
DQGCNSEECGWDGLDCARRVPEALARGVLVVTVLLPPEELRRASTAFLQRLSAILRTSLR
FRLDADGNLMIRPYYRPRGRRRRREVDPREGETPEGEHDEVIGSVVTLEIDNRLCSQASD
KCFPDTRSAADYLGALSALERLHFPYPIKAVRGDKLPEEPDPVRLLPLVVVGGLILLAIA
VLGVLVARRKREHSTLWFPEGFSLAKGSNKDRREPVGQDALGMKTMGKGESLVGEPSEEW
PEGTCPEAKRLKVEEGGAEPQDPVDCRQWTQHHLVAADIRMPPTMALTPPQGEFDSDCVD
VNVRGPDGFTPLMLASFCGGGVEAEVAEDEEGEDASAGIIGDLICQGASLGAQTDRTGET
ALHLAARYARADAAKRLLDAGADTNAQDNTGRTPLHAAVTADAQGVFQILIRNRSTDLDA
RMADGSTALILAARLAVEGMVEELIACHADVNAVDETGKSALHWAAAVNNMEATLALLKN
GANKDMQDSKEETPLFLAAREGSYEAARILLEHSANRDISDHLDRLPRDIGHQRRHHDIV
RLLDHHGGGRSPPATSVPPPALLGPPSAAFLPPKKSRRPGGGKGGAKGRSKKAECPPGLE
SSVTLSPVESLGSPYGPNPASPGLFGVPPPGLEPPPGPPPSFAVALGVARLPGGAGGPVV
PPPPSSARLVAVPYEWHGRGAPHPGPGGGCGLGAPPHPPLPPPPGQSFAPALLLPHGAVG
RGPPPRSPQGGGGGGGAPPYFPGGGEEYGGAFLGVPSEHPYLTPSPETPEPWASPSPPSL
PDWSEATPSPNLLAPPQTQLPPPPAPAPRAGPPQE
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggctccgggggggctcccgggcctggtgctgctgctgctgcacctcggggcg
gccgcagtgctgccatgcccggaggggacaaacccctgcgagaacggggggcaatgcgtg
ctgcaccccaacggccgcaccgcctgcctgtgccggccgggggcgctgggggagcggtgc
cagctgcgggacccctgcgtgccctcgccctgcgcccacggggggctgtgccagagcacc
ctgcacgacggcgccctgagccacctctgcctctgcccccccggcttccgcggcccctcc
tgctcgctgccggacccctgcacccccttgccctgcctcaacgggggcacctgccgcccc
ctcggtgaggggggcttcgagtgcagctgcctgcccgggttcacggggcagggctgtgac
accaacgtggacgattgccccgggcacaagtgccagaacgggggcacctgcgtggacggg
gtcaacacctacaactgccagtgcccccccgagtggacaggccagttctgcaccgaggac
gtggacgagtgccagctgcagcccaacgcctgccacaacgggggcacctgcttcaactcg
ccgggcgcccacgtctgcgtctgcgtcaacggctggacgggcgagagctgcgccgacaac
atcgacgactgcgccaccgccgtctgcttccacggcgccacctgccacgaccgcgtcgcc
tccttctactgcgcctgccccatgggcaagacggggctgctgtgccacctggacgatgcc
tgcgtcagcaacccgtgccacgaggacgccgtctgcgacaccaaccccgtcaacggccgc
gccatctgcacctgcccccccggcttcaccggcggcgcctgcgaccaggacgtcgacgag
tgctccatcggcgccaacccctgcgagcacttcgggcgctgcgtgaacacccagggctcc
ttcgagtgccgctgcggccggggctacgcggggccgcgctgcgagagcgacgtcaacgag
tgcctgtcggggccctgccgcaaccaggccacctgcctggaccgcatcgggcgcttcacc
tgcatctgcatggccggtttcagcggccccctgtgcgagctggaggtggacgagtgccag
agcagcccctgcgccaacggcggccgctgcaccgacctggtcaacggcttcgcctgctcc
tgcccccccggcttctcgggccccacgtgccagacggacatggacgagtgcgccagcacc
ccctgccagaacggcgccaagtgcatcgaccggcccaacggctacgagtgccgctgcacc
gagggcttcgagggcgccctgtgcgagcgcgacgcggacgactgcacgccggacccgtgc
caccacggcacgtgcgtggacggcatcgccagcttctcctgcgcctgcgcccccggcttc
accgggtaccgctgcgagctgcagctggacgagtgccacagccagccctgccgccacggg
ggcaagtgcatcgaccgcatcgcctcctaccagtgcaactgcccccccggcaccgccggc
gtcaactgcgaggtgaaccccgacgattgcgccagcgacccctgcgtccacggcgtgtgc
caggacggcatcggccgctacgactgcgtctgccagccgggcttcacgggcccccgctgc
aacgtggagatcaacgagtgcgcctcgaacccgtgccacgacggcggcacctgcgtggac
ggcgccaacggcttcacctgcctgtgcccgccgggcacccgcgatgcccagtgccgcccg
ggcaccctgccctgccacagcagcccctgcgtccacggcacctgccgtgaccacggggat
gggttctcgtgcgagtgtgagccgggctgggggggccccacgtgcgcccagcggggggac
gcctgcgcctcgcggccctgccgccacgggggcacctgcacccccctgggggggggctac
cgctgcgcctgccgccagggctaccaagggcgcgcgtgcgaggtggtcctggccccctgc
gcccccgacccctgcgacaacgggggcacctgtgcccccaccgccgactacgggggcttc
acctgccgctgcccccccggctggcaaggggagcggtgccaggaggatgtggacgagtgc
ggggccagcccctgccagcacgggggcacctgcgccaaccgccccggcacctttgggtgc
ctctgcccccccggctacggggggggtgtctgtgagcacgacctcgatgactgcgacccc
gacccctgcctgaacgggggctcgtgccgcgacggggtgggggccttcacctgcgcctgc
ccccccggcttcacggggccacgctgcggcaccgaggtggacgagtgccggggggggccc
tgccgcaacgggggcacctgcaccgactacgtcaacggcttcgcctgcgcctgccccccc
ggctggaccggcccccgctgccagcacgacgtccccgactgcaccgacagctcctgcttc
aacggggggacgtgcgtggacggcgtcgcctccttcagctgccgctgcccccccggcttc
acgggcgcccactgccagtacccagccgatgggtgccgggggcagccctgccagcggggg
ggcacctgcgtcgccgcgggggggtcctaccgctgcctctgcccccccggctacacggga
gcccagtgccagaccctgcaggacctgtgccagccccccccgtgccacaacgggggccgg
tgccagcaggaggggggggccatcacctgccactgcccccccggctgggctgggacccac
tgcgacgtccccaacgtgtcctgcgccgtggtggccgcccgcagaggcgtgccggtgtcc
cacgtgtgccacggccgcgggcgctgcgtgccggcgggggggggccaccgctgcctgtgc
cagggggggttcgggggcccctactgccagacccccctggacccctgccagcacaacccc
tgccgccacggcgccgcctgccgcagcttcgtgggggggtaccactgcgagtgccccccg
ggctacacgggccaggactgcgagctggaggtggccgagtgccagtcgcagccgtgccag
cacggggggacctgcatcgacctgccggggggctacctctgctcctgcccccccggcacg
ctgggcgtcctgtgcgagatcaacgaggacgactgcgcgggggggccgggctgccagcac
aacggcacctgcgtggatgccgtgggggggttcacctgcgcctgcccccccggcttcggg
ggcgcccgctgcgagggggacgtcaacgagtgccgccgccacccctgccacccccggcac
agccgcgcctgcgtccagggggacaacagctaccgctgcctctgccggcccggctacacc
ggccaccgctgccagagcccggtgaacgcctgcgagtcgcagccctgccgccatgggggg
ggctgccagcccacccccgacacccccccgggcttcacctgccgctgcccccctggtttc
gggggcccccagtgcgagcgccgggccccctcctgccgccacctctcctgcgccaacggg
ggccactgccagcccccccccgccggcccccgctgcgtctgcccccccggcttcgggggt
cccgagtgccagcagcgggtgccccccccccaaaaaaacaccacctgcccggcctccccc
tgcctgcacggcggcacctgcgccccctccccgcgcccccccttcgcccgctgcctctgc
cccccgggtttcgggggggcgtggtgccaggaggagacccccgcgacgccccccnnccgg
cctgacgggtgccccctggggggggggtgcgaggagctggggggggacggggtgtgcgac
cggcactgcaacacggctggctgcggctgggacgggggggactgctcgctgcgggtgggg
gacccctggcgccactgcgcccccccccagtgccgggggctcttcggcaacgggcgctgc
gacgggggctgcgacaccccccagtgcctctacgacaacttcgactgccgcccgccccac
cgcgcctgcaaccccctgtacgcccagtactgctccgaccacttcgccgacgggcgctgc
gaccagggctgcaacagcgaggagtgcggctgggacggcctcgactgcgcccgccgtgtc
cccgaggcgctggcccggggggtgctggtggtgacggtgctgctgccccccgaggagctg
cggcgagccagcaccgccttcctgcagcgcctcagcgccatcctgcgcacctcgctgcgc
ttccgcctcgacgccgacggcaacctgatgatccggccctattaccggccccgcgggagg
aggaggaggcgcgaggtggacccccgagagggggagacccccgagggggaacacgatgag
gttataggctcggtggtgacgctggagatcgacaaccgcctgtgctcgcaggcgtccgac
aagtgcttccccgacacccgcagcgccgccgactacctgggcgccctctccgccctcgag
cgcctccatttcccctaccccatcaaggccgtgcgcggggacaaactccccgaggagccg
gacccggtgcggctgctgccgctggtggtggtggggggcctgatcctgctggccatcgcc
gtgctgggggtgctggtggcgcggcgcaagcgggagcacagcaccctctggttccccgag
ggcttcagcctggccaagggcagcaacaaggaccggcgcgagcccgtggggcaggacgcc
ctgggcatgaagacgatggggaagggcgagagcctggtgggggagccctcggaggagtgg
ccagagggcacctgccctgaggccaagcggctcaaggtggaggaggggggcgcagagccc
caggaccccgtggactgccggcagtggacccagcaccacctggtggcggccgacatccgc
atgccccccaccatggcgctgacgcccccccagggggagttcgactccgactgcgtggat
gtcaacgtccgcgggccagatggcttcacgccgctgatgctggcctccttctgcgggggc
ggcgtggaggccgaggtggccgaggatgaggagggcgaggacgcctcggccggcatcatc
ggcgacctcatctgccagggcgccagcctgggcgcccagacggatcgcacgggcgagacc
gccctgcacctcgccgcccgctacgcccgcgccgacgccgccaagcgcctcctggacgcc
ggtgccgacaccaacgcccaggacaacaccgggcgcacgccgctgcacgctgccgtcacc
gccgacgcgcagggcgtcttccagatcctgatccggaaccgctcgaccgacctggacgcc
cgcatggccgacggctccaccgcgctcatcctggcggcgcggctggcggtggagggtatg
gtggaggagctcatcgcctgccacgccgacgtcaacgccgtcgatgagaccgggaaatcc
gccctgcactgggccgcggccgtgaacaacatggaggcgacgctggcgctgctgaagaac
ggggccaacaaggacatgcaggacagcaaggaggagaccccgctgttcctggccgcccgg
gagggcagctacgaggcggcccgcatcctgctggagcacagcgccaaccgggacatcagc
gaccacctggaccgcctgccgcgggacatcggccaccagcgccgccaccacgacatcgtc
cgcctgctggaccaccacgggggggggcgcagcccccccgccacctccgtgccccccccg
gccttactgggtcccccctccgccgccttcctgccccccaaaaagagccggcggcccggg
gggggcaaagggggcgccaaggggcgcagcaagaaggccgagtgcccccccgggctggag
agctcggtcaccctgtcccccgtcgagtccttggggtccccgtacggccccaaccccgcg
tcccccgggcttttcggggtgcccccccccgggctggagccgccgccggggcccccccct
tccttcgccgtcgccctgggggtcgcgaggctgccggggggagccgggggtcccgtcgtc
ccccccccgccctcctcggcccgtttggtggccgtcccctacgagtggcacggccgagga
gccccccaccccgggccgggaggggggtgcgggctgggggcccccccgcacccacccctg
ccccctcccccggggcaaagcttcgcccccgccctgctgctgccccacggcgccgtgggg
cgcggacccccgccccgctccccccagggcggggggggcggggggggggcccccccttat
ttcccgggggggggagaggagtacgggggggccttcctgggggtgcccagcgagcacccc
tacctcaccccctcccccgagacccccgagccctgggccagcccctcgcccccctccctc
cccgactggtccgaggccacccccagccccaacctgctggcccccccccagacccagctg
ccccccccccccgcccccgccccccgagcaggccccccccaagag
DBGET
integrated database retrieval system
