Cygnus atratus (black swan): 118261459
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Entry
118261459 CDS
T09349
Symbol
SAMD4B
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118261459 (SAMD4B)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118261459 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SMG1
SAM_3
Motif
Other DBs
NCBI-GeneID:
118261459
NCBI-ProteinID:
XP_035428196
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MMFRDQVGIVAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCADIHLLEA
EANSAAAISQWPQEPAEAAVALLLAHLPLLQPGNAAAKAEYMKRLQKVLAYAIESNRCVE
ESRQLLSYALIHPATTLDDRSALALWLGHLEERLAGGAPPPAAAAPPPPPRPPPRPDAAP
PPPRRAPHDWPEHGPPEIGPPWPEAAPRENGHPPFHPPGGGNGLGGTALPCQLHPSPLKR
SLSLVPGSPQGGGGEWPGGGEEPGPPRAPFGDHAPLSPQSSVASSGSEQTEEPAGGRNTF
QEDGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEHHLESQNVTKGARHKIALSIQ
KLRERQSVLKALEKDILEGGNLWTALQELQQIMVTPIKAFRPPPAPPANGTPDGAPPGAA
DAFAPHPAADAEAPAAPVPDGDIPGQFTRVMGKVCTQLLVSRPDEENITSYLQLLEKCLS
HEAFTETQKKRLLSWKQQVLKLLRAFPKKVPLEGPGYRPPKGWAFGSNSLPIAGSVGGAG
GRRGQRPFALPPRALPPARLGLLGPAGGAPAPRPPLGAPPLGTQGRQSLWFGSGGAGGAP
GSRSAVQRTHSLPVHTSPQALLAFPQECPLPGTDLEINPTLESLCLSMTEHALGDGTDKT
STI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtggggatcgtggccggttggttcaagggctggaacgagtgc
gagcagaccgtggcgctgctctcgctgctcaagcgcgtcacccgcacccaggcgcgcttc
ctgcagctctgcctcgagcactcgctggccgactgcgccgacatccacctcctcgaggcc
gaggccaacagcgccgccgccatcagccagtggccgcaggagccggcggaggcggcggtg
gccctgctgctggcccacctcccgctgctgcagccgggcaacgccgccgccaaggccgag
tacatgaagcggctgcagaaggtgctggcctacgccatcgagagcaaccggtgcgtggag
gagagccgccagctgctctcctacgccctcatccaccccgccaccaccctggacgaccgc
agcgccctggccctctggctgggccacctggaggagcgtttggccggcggcgcccccccc
ccggcggcagcagcgccgccgccgcctccgcggccgcccccccgccctgacgccgcgccc
cccccgccccgccgcgccccccacgactggcccgagcacgggccccccgaaatcgggccg
ccctggcccgaggcggccccccgggagaacgggcaccccccgttccacccccccggcggc
ggtaatgggctggggggcacggcgctgccctgccagctgcaccccagcccgctgaagcgc
tccctgtcgctggtgcccggcagcccccaggggggcggcggcgagtggccgggggggggc
gaggagccgggccccccccgcgcccccttcggcgaccacgcgcccctctcgccgcagagc
agcgtggcctcgtcgggcagcgagcagaccgaggagcccgccggcggccgcaacaccttc
caggaggacggcagcggcatgaaagacgtcccctcgtggctgaagagcctgcggctgcac
aagtacgcggcgctcttctcgcagatgacctacgaggagatgatgacgctgaccgagcac
cacctcgagtcgcagaacgtcaccaagggcgcgcggcacaagatcgccctcagcatccag
aagctgcgggagcgccagagcgtcctcaaggcgctggagaaggacatcctggaggggggc
aacctgtggacggcgctgcaggagctgcagcagatcatggtgacgcccatcaaggctttc
cggccccccccggccccccccgccaacggcacccccgacggggcccccccgggggctgcc
gacgccttcgccccccacccggccgccgacgccgaggcccccgcggccccggtccccgac
ggggacatcccggggcagttcacccgggtcatgggcaaagtgtgcacccagctgctggtg
tcgcggccggacgaggagaacatcacgagttacctccagctcctcgagaagtgcctgagc
cacgaggcgttcacagagacgcagaagaagaggctcctctcctggaagcagcaggtcctg
aagctgctccgcgccttccccaagaaggtgccgctcgagggcccgggctaccggcccccc
aaaggctgggccttcggctccaactcactccccatagctggctctgtggggggggcgggg
gggcggcgggggcagcgcccctttgcgttgcccccccgcgcgctgccccccgcccgcctg
gggctgctgggccctgccgggggggccccggccccacggccccccctcggcgcccccccc
ctcggcacccagggccgccagagcctgtggttcggcagcgggggggccgggggcgccccg
gggagccgcagcgcggtgcagcgcacccactcgctgcccgtccacacctcgccccaggcc
ctgctcgccttcccccaggagtgccccctccccggcaccgacctggagatcaaccccacg
ctggagtcgctgtgcctgagcatgacggagcacgcgctgggggacggcacagacaagacc
tcgaccatctga
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