Cygnus atratus (black swan): 118261705
Help
Entry
118261705 CDS
T09349
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118261705 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cata03400
]
118261705 (XRCC5)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
118261705 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF2922
Motif
Other DBs
NCBI-GeneID:
118261705
NCBI-ProteinID:
XP_035428541
LinkDB
All DBs
Position
6:29119756..29166191
Genome browser
AA seq
728 aa
AA seq
DB search
MARSKAAIVLCLDVGFTMSSSYPGEESSLEQAKKVMTKFVQRQVFAESKDEVAVVLFGTD
GTRNGLASGDQYQNITVHRSLMLPDFDLLEDIQTVIQPGSQQADFLDAIIVCMDLLQKET
VGKKFEKRHIELFTDLNSPVSEDQLEIIVANLKKAGISLQFFLPFPVNDDDGGGDTSASI
RSHLQQNPFPRKGLTGQQKEGVDVVTKLMHTLDEGGLEEIYTYRESLERLSMFKKIERRP
AAWSCQLTIGSNLSIKIVAYKSLTEEKVKKMWTVVDAKTLKKEDVQKETVYCLNDDDETE
VQKDDTIQGFRYGSDIIPFSREDEEQMKYKAEAKCFSVLGFSRSSQIQRHCYMGNQVLKV
FAAKDDENAAVAFSALVHALDELKVVAIVRYVYDRRCNPQIGVAFPYIKDAYECLIYVQL
PYSEDVRQYVFSSLKNNKKFTPTADQLSAVDSLIDSMNLVYEDDDGETFEDLFKPSKIPN
PHFQRLYQCLQHKAFHPNEPLPPIEQHLLEMLEMPCMVKERCQVPLEKVKALFPLKDVGK
KKEEKTAQDIFKDDNEDGPNPKKQKIEDEEDSFSIIKLAEGNVTSVGSVNPAEDFRILVR
QKNADFKDVSQQLINRIDQFLEHKSSQYYMKGINCIRVFREEAMKLSKVRCFNDFLQALK
SKVEDKAVVDFWEMVVQDRISLITKDEAEGSSVTSEEAEKFLAPKEKKNEPLPATDEGGD
VDDLLDMM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagcaaggcggcgatagtgctgtgtctggatgtaggctttacgatgagtagt
tcttatcctggcgaggagtcttcacttgaacaagccaagaaggttatgacaaaatttgtg
cagcgacaggtttttgctgagagtaaagatgaagtcgctgtagttttatttggcacagat
ggtactaggaatggccttgccagcggagatcaataccagaacattactgtacataggtca
ctaatgctaccagattttgatttgctggaagacattcaaactgtgattcaaccaggctct
caacaagcagactttctggatgcaattattgtgtgtatggacttgcttcagaaggaaacc
gtaggaaagaagtttgagaagagacacattgaactgtttacagaccttaatagtcctgtc
agtgaggatcagctggaaattatcgttgctaacttgaagaaagcaggaatttcacttcag
ttttttctgccgtttccagtgaatgatgatgatggaggtggagatacaagtgccagcata
cgttctcatttgcagcaaaaccctttcccaagaaaggggctaactgggcagcagaaggaa
ggagttgatgtggtgaccaaattgatgcatactttggatgaaggagggctggaagaaatt
tatacttacagagagagcctggagcgtctttcaatgtttaagaaaatagaaagaagacct
gcagcttggtcctgccagttaactattggttccaatttgtccataaagattgtggcctac
aaatcacttacagaagagaaggtgaaaaaaatgtggacagttgtagatgctaaaaccctc
aaaaaagaagatgtacaaaaagaaactgtttactgcttgaacgatgacgatgagacagag
gttcagaaagatgatactattcaagggtttcgctatgggagtgatatcattcctttttcc
agagaagatgaagagcaaatgaaatacaaagctgaagcaaaatgtttttctgttttggga
ttcagcagatcctctcagattcagaggcactgttacatgggaaaccaggttctcaaggtc
tttgcagcgaaagatgatgagaatgcagcagttgctttttcagcccttgttcatgcattg
gatgagttgaaagtagtagctatagtgcgttatgtttatgatagaagatgtaacccacaa
attggcgtggcttttccatatattaaggatgcatatgagtgtctcatctatgtgcaatta
ccgtactcggaagatgtaagacaatatgtgttttcatccctgaaaaacaataaaaaattc
actcctacagccgatcagttatctgcagtcgactctttgattgattctatgaatttggtt
tatgaagatgatgatggagaaacttttgaggacctgtttaagcccagcaaaatcccaaac
cctcattttcagaggttatatcagtgtttgcaacataaggcttttcaccccaatgagccg
ctgccgccaattgaacagcaccttttagagatgctggagatgccctgcatggtaaaagaa
aggtgtcaggttcctcttgagaaagtgaaagcactcttccctctaaaggatgttggcaag
aaaaaagaagaaaagactgctcaagacatctttaaagatgacaatgaagatggacctaac
cctaagaaacaaaaaattgaagatgaggaagatagctttagcatcataaaacttgctgaa
ggcaatgtcacctctgttggcagtgttaacccagcagaagacttccgaattctggtgagg
cagaaaaatgctgacttcaaagatgtgagtcagcagctgataaaccgcatcgatcagttt
ctggaacataaaagttcacagtactacatgaaagggatcaattgtatcagagttttcaga
gaagaggccatgaagctgtccaaggtgcggtgctttaatgattttctgcaggccctgaaa
tcaaaggtggaagacaaagccgtagttgatttctgggagatggtggtacaagacagaatt
tctttgatcactaaagatgaagcagagggaagttctgtgactagtgaagaagctgaaaag
ttcttggctccgaaagaaaagaaaaatgaacctctgcctgctacagatgaaggtggtgat
gttgatgacttgctggacatgatgtga
DBGET
integrated database retrieval system
