Saccharobesus litoralis: C2869_07775
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Entry
C2869_07775 CDS
T05408
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cate
Saccharobesus litoralis
Pathway
cate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2869_07775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cate03019
]
C2869_07775
Enzymes [BR:
cate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2869_07775
Messenger RNA biogenesis [BR:
cate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2869_07775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
P-loop_SecA
Sacchrp_dh_NADP
CMS1
Motif
Other DBs
NCBI-ProteinID:
AWB66336
UniProt:
A0A2S0VQ46
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All DBs
Position
2258604..2260067
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AA seq
487 aa
AA seq
DB search
MVEENGSNKTVNTTPEQTVETGTPDTQLAGFESLGLSTAIVRAVSQAGYTQPSPIQAEAI
PVVLKKRDLMAAAQTGTGKTAGFTLPMLDLLNKGTLASRNQVRALVLTPTRELAAQVAES
VDKYGSQLPLTSHVVFGGVKINPQMQKLRGGADVLVATPGRLLDLYQQNAIKFDKLEILV
LDEADRMLDMGFIRDIRKILDLLPKKRQTLMFSATFSPDIRALAKDMTHNPIEVSVTPEN
STNRSVDQSLYVVERSHKTDILIRLIKQNSWFQVLVFTRTKHGANRLVRKLDKAKITAAA
IHGDKSQGARTRALAEFKAGDIAVLVATDIAARGLDIEQLPQVVNFELPHVAEDYVHRIG
RTGRAGATGKAISLVCSEEAKQLSAIECVTGELIERKLLDGYETKEVVPQTKIRPLKAKK
PKKPKRAKVEHKDGQGFAKHKPGSSAKKSRHADSPSRKPAHNKTSIAKPQIKKEYGYIGR
VGNGKPS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagaaaacggtagtaataaaacagtgaatacaactccagagcaaacggtggaa
accggtacgcctgatacacagttagctggatttgaatcgttaggtttgtctactgctata
gtgcgcgctgttagccaagcgggttatacccaaccatcacccattcaagctgaagccatc
cctgtagtattaaaaaaacgcgatctaatggctgctgcgcaaacgggtacaggtaaaaca
gcgggttttactctacctatgctggatttattgaataaaggaaccttagctagccgtaac
caagttcgcgcattagtgttaacgccaactcgagagttagccgctcaagtagccgagagt
gttgataaatacggcagtcagttgcctttaacctctcatgttgtgtttggtggcgtaaaa
attaaccctcaaatgcaaaagctaagagggggagccgatgtcttggtggctacaccaggt
cgccttttagatttatatcaacaaaatgcgattaaattcgacaagttagaaattttggta
ttggatgaagctgatcgcatgttagacatgggattcattcgtgatattcgtaaaatttta
gatttgttaccgaaaaagcgtcaaactttgatgttttctgcgactttttcaccggatatt
cgggcgttagctaaggatatgacgcataaccctattgaagtgtcagtaacccctgaaaac
tcgaccaatcgttcggttgatcaaagtttatacgtggttgaacgaagccataaaacagat
attttaattcgtttaattaagcaaaactcttggtttcaagtattagttttcactcgcact
aaacatggcgctaaccgtttggtgcgtaaactggataaagctaaaattactgctgcggcg
atccatggcgacaaaagtcaaggtgccagaacccgcgctttagccgagtttaaagcgggt
gatattgcggttttagtggcgactgatattgcagcacgcggattggatattgagcaatta
ccgcaagtggttaactttgaactgccgcatgtcgcagaagactatgtacatcgcattggc
cgtaccggacgagcgggcgctacaggtaaagccatctctttggtatgtagtgaagaagcc
aagcaattatccgcgatagaatgcgtaaccggtgagctaattgagcgtaaattattagat
ggctatgaaactaaagaagtggtaccacaaacgaagatcaggccgttaaaagccaagaaa
ccgaaaaagccgaaaagagccaaagtagagcacaaagacgggcaaggctttgctaaacat
aagccgggtagctcagctaaaaagtcacgccatgcggattcgccatcaagaaaaccagca
cacaacaaaacgtcaatagccaaaccgcaaataaagaaagaatacgggtacatcgggcgg
gtaggtaatggcaaacctagctaa
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