Saccharobesus litoralis: C2869_08000
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Entry
C2869_08000 CDS
T05408
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cate
Saccharobesus litoralis
Pathway
cate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2869_08000 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cate03019
]
C2869_08000 (recQ)
03400 DNA repair and recombination proteins [BR:
cate03400
]
C2869_08000 (recQ)
Enzymes [BR:
cate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2869_08000 (recQ)
Messenger RNA biogenesis [BR:
cate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2869_08000 (recQ)
DNA repair and recombination proteins [BR:
cate03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2869_08000 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AWB66373
UniProt:
A0A2S0VQ77
LinkDB
All DBs
Position
2317319..2319130
Genome browser
AA seq
603 aa
AA seq
DB search
MTANAADILTQVFGYDAFRPGQDKVIDHVLQGQDVLCIMPTGSGKSLCYQVPALCLPHYT
IVISPLIALMQDQVEQLKALGVQAAFLNSSLESAQQKQVLHDISAGQIKLVYIAPEKLLT
RTVIEFMQFNPPSLFAIDEAHCISQWGHDFRPDYTALGQIKLNFPTVPVLALTATADRAT
RTDIKNQLQMQNGFEYIGSFDRPNIRYNQIEKFKPLQQILRFLKDKNNESGIVYCSTRKK
CEEVCDFLVRQGVKSSLYHAGLTLEERSQNQSAWLRDDVQIIVATVAFGMGINKPDVRFV
IHYNIPRSIESYYQEAGRAGRDGLEAEALLLYDHADGDTIRWFIEQSDSEERKQIETQKF
DAMTALAESETCRRQVLLNYFGESTQSACGNCDICLDPPQKFDGTLAAQKALSAVYRSGQ
SAGINYIVDILRGANTQRIRDNQHEQLKVYGLGKEHNADYWHSVFKQLIHHGLLFQDIAE
SNHLKLTEAARPVLRAETKLELAQPRSTTTPQQKASNSKTTSVRSNYDKRLFIRLKQLRK
FIADEQEVPPYIIFNDATLADMASRLPTSLEEMLKVSGVGETKLGRYGQKFINEISDYLA
RFD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgacagcaaacgcagcagatattttaacccaagtatttggttatgacgcatttcgtcca
ggccaagataaagtgatcgatcatgttctgcaaggacaggacgtgctgtgtatcatgcca
actggcagtggaaaatcactttgttatcaagtccctgctctgtgcttacctcattataca
attgttatttccccattaattgctttaatgcaagatcaagtagaacaacttaaagcgtta
ggcgtgcaagccgcttttttaaattctagtttagagtcagctcaacagaagcaagtgctg
cacgacataagcgccggacaaattaaacttgtctatatagcgccagaaaagctactaaca
cgcactgttattgaatttatgcagttcaatccacctagccttttcgctattgatgaagcg
cattgtatatcacaatggggacatgactttcgccctgactacacagcgctaggtcaaata
aagctcaatttcccaactgtgcccgtacttgcactaacagcaaccgcagatagagcaact
cgtactgatataaaaaatcagctgcaaatgcagaatggctttgaatacatcggcagtttt
gatcgacccaatattcgctataaccaaatagaaaagtttaaacctctacaacaaatatta
agatttttaaaagataagaataatgagtcaggcatagtttattgcagcacaagaaagaag
tgcgaagaagtatgtgactttctcgtaaggcaaggcgtaaagtcaagcttatatcatgcc
ggtttaactttagaagagcgtagccaaaatcaatctgcttggctgcgagacgatgtacaa
attattgttgcaacggtcgcgtttggtatgggtattaataaaccagatgtacgttttgtc
attcattacaatatcccccgctccattgaaagctattatcaagaagccggtcgagcaggt
cgtgacggcttagaagccgaagcacttttactgtatgaccatgccgatggagatactatc
cgctggttcatcgaacaaagtgatagcgaagagcgtaagcaaatagaaacacaaaaattt
gatgccatgacggcactggccgaaagtgaaacctgtcgtcgccaagtcttacttaattac
tttggtgagtcgacacaaagcgcttgtggcaactgtgatatttgcttagatcctccacaa
aagtttgatggaactttggccgcgcaaaaggcgctatcagcggtttaccgctcaggtcaa
tcagccggtattaattatatcgtcgatatattacgcggtgctaatacccagcgtatcaga
gacaatcagcatgaacagctaaaagtgtacggcttaggcaaagagcacaacgcagattac
tggcatagtgtttttaaacaactgatccatcacggtctattgtttcaagatatagcagaa
agcaaccatttgaaattaacagaggctgcgcgacctgttttaagagcggaaacaaaacta
gaattagcacagccaagaagcacaacaacgccccagcaaaaagcatccaatagtaaaaca
actagcgtgcgctctaactatgacaagcgactgtttattcgtttaaaacaattacgtaaa
tttattgccgatgagcaagaagttccgccctatatcatttttaatgacgcgaccttagcg
gatatggccagtcgcttacctaccagtttagaggaaatgctgaaggtttctggagtgggt
gaaaccaaactagggcgttatggccaaaaatttattaatgaaatttcagattatttagcg
cgcttcgattaa
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