Saccharobesus litoralis: C2869_10630
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Entry
C2869_10630 CDS
T05408
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cate
Saccharobesus litoralis
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cate03021
]
C2869_10630
Transcription machinery [BR:
cate03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C2869_10630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Tex_YqgF
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AWB66859
UniProt:
A0A2S0VRL9
LinkDB
All DBs
Position
2971435..2974347
Genome browser
AA seq
970 aa
AA seq
DB search
MTDFALGQRWISDSESDLGLGTVVAIQGRRISMLFPATGEQREYVSDTAPLTRVTFNKGD
KVDSADEWSIIVEDIEEADGLYIYFGKNADTGEDASLIETRINHHLKLNKPQDRLFTGQI
DRNDWYDLRYQSRKFQFNYQTNDLVGLNGARTSLIPHQLHIAKEAGQRFAPRVLLSDEVG
LGKTIEAGMIIHQQILTGRASRVLILLPETLQYQWLVEMLRRFNLSFSIFDEERCAEYAE
SGENPFETEQLIICPLKLLSESEQRQKQACAASWDLVVVDEAHHLKWSPEQPSAEYSCVE
QLAAISKGLLLLTATPDQLGHESHFARLRLLDKERFYDYESFVKDEASFKQTADLAKALI
GEGNLAADDISQLNSLDANNGEIEQALLTVNSQDAEERLTSRKVILANLIDRHGTGRVLF
RNTRASVQGFPQRHVNPVELDYPEEYLSSTRWWLNRHQDQPKVQDVAALLTPEFVYEAEG
HEDQPWWLVDPRVDWLSEKIKADKSNKYLVICAKASTALTLEKAFRTLQGINSAVFHEGM
SIIERDRAAAWFADMEEGCQVLICSEIGSEGRNFQFANQLVLFDLPLNPDLLEQRIGRLD
RIGQRNDIDIHIPYFSGTASESMFKWLHQGINAFADTCPAGVNVFEQQADGLLDALFQLE
HDDAVVAPFIDQAQAIITDLNKQMEQGRDILLELNSKGTDGEAIADAILEMDDDTSLIAF
MFQVFDVYGVQQEEKGNQCLVVKPTEHMLEPHFPELTDEGMTISFDRETALTRDDVRFVS
WDHPMVQGCFDMIARSEVGNNAVSILPNKALPEGTFFVELMYVVETAAPKHLQPGRFLPP
TPVRLLLDKSGNNLAAKVAYEGFNKQLKPVNKQTASQLATALQTAVHQLIGVGEGIAQQQ
MQQIVEQAQERVEVKLAAELSRLQSLQQVNPSIRDVELTALEQQRAELKDYIGQAGVQLD
AVRLIVVSHQ
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgacagatttcgccttaggtcaacgttggattagtgactcagagtcagatttagggttg
ggtacggtagtcgcaattcaaggtcggcggatttccatgctgtttccagcaaccggcgag
cagcgtgagtatgtatcggatacggcgcccttaactcgcgttacctttaataaaggcgat
aaagtcgattcggctgatgaatggtcaattattgttgaagacattgaagaagccgatggc
ctgtatatttactttggtaaaaatgctgatacaggggaagacgcctcacttatcgaaacg
cgtatcaatcatcatttaaaattaaataaaccacaagatagattatttactggtcaaatt
gatcgtaatgattggtatgacttacgttatcagtcacgtaaattccaatttaattatcaa
accaatgatttggtcggtttaaacggcgcgagaacgtcacttattccgcatcagttacat
atcgccaaagaagccggtcagcgttttgcaccgcgtgttttattgtcagacgaagtgggt
ttaggtaaaaccattgaagcaggtatgattattcaccagcaaatcctgactggacgcgcg
agtcgcgtgcttattttgttacctgaaacactgcagtatcaatggctagttgaaatgcta
cgtcgttttaacttgtcgttttctatattcgatgaagagcgttgtgctgaatatgccgag
tcgggtgaaaatccgtttgaaaccgagcaattgattatttgcccgttaaagctattgagt
gagtctgaacaaagacaaaaacaagcctgtgccgccagttgggatttagtcgtagtcgat
gaagcgcatcatttaaaatggtcaccagaacaaccaagtgcagaatatagttgtgttgaa
caattagctgcgattagcaaaggcttgttattattaaccgcgacgccagaccaactaggg
catgaaagccattttgctcgtttacgcttactggataaagaacgcttttatgactacgag
tcgtttgttaaagacgaagcatccttcaaacaaacggccgatctcgccaaagccttaatt
ggtgagggcaacttagcagcagatgatattagtcaacttaactcgcttgatgcgaacaat
ggtgaaattgaacaagcattattgaccgtcaatagtcaggatgctgaagagcgcctaact
agccgcaaggtgattttagcgaatttaattgaccgccatggcacggggcgagtgttgttc
cgtaatacccgcgcttctgtgcaaggttttcctcagcgtcatgttaaccctgttgaactc
gattacccagaagagtatttgtcatctacccgctggtggttaaatcgtcatcaagatcaa
cctaaagtgcaagatgttgcggctttattgacccctgaatttgtatatgaagcagaaggc
catgaagatcaaccttggtggttagttgatccacgagttgattggttaagtgaaaaaatt
aaggctgacaaatccaataagtatttagtgatttgtgccaaggcgtcgaccgcgttaacg
cttgaaaaagcctttcgtactttacaaggcattaactcagcagtatttcatgaaggcatg
agcattatagagcgagaccgagccgcagcttggtttgctgatatggaagaaggctgtcag
gtgttaatttgttcagaaataggttctgaagggcgtaacttccagtttgctaaccagttg
gttttatttgatttaccgcttaaccctgatttattagagcaacgtattggtcgtttagat
cgtataggtcagcgtaacgatatcgatattcatattccttactttagtggcactgcgtct
gaatccatgttcaagtggttgcaccaagggatcaatgcgtttgccgatacttgtcctgct
ggggttaatgtatttgagcagcaagcggatggtttattagatgcattattccaattagag
catgatgatgcggttgttgcgccattcattgatcaagcgcaagcgattattactgatctg
aataaacaaatggaacaaggccgcgatattctactcgagcttaattcgaaaggaactgac
ggcgaagccattgctgacgcgattttagaaatggatgacgataccagtcttatcgccttt
atgtttcaagtatttgatgtatatggagtgcagcaagaggaaaaaggtaaccagtgcttg
gtggttaagccaactgagcatatgttagagccgcactttccagaattgaccgatgaaggc
atgacgattagttttgatcgtgaaaccgcgttaacacgcgatgatgtgcgctttgttagc
tgggatcaccctatggtgcaaggttgctttgacatgattgcccgtagtgaagtgggtaat
aatgcggtgagtattttacctaataaagcgctcccagaaggaaccttctttgttgagtta
atgtatgtcgttgaaactgcagcgcctaaacatttgcaaccaggacgttttttaccgcca
actccagttcgtttattactggataaatcgggcaataatttagctgctaaagtggcgtac
gaaggatttaataaacaacttaagccggtaaacaagcaaacggcttcgcagttggcaacg
gcactgcaaaccgccgtgcatcaattaattggtgtcggtgaaggtattgctcagcaacaa
atgcaacaaattgttgagcaagcgcaagaaagggtagaagtgaaattggctgctgaatta
agccgcttgcaaagtttgcaacaagtcaacccaagcattcgtgatgtagaattgaccgcg
ttagagcagcaacgcgctgagctaaaagactatatcggccaagcgggtgtgcaattagat
gcagtgcgcttaattgtggttagccatcagtaa
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