Saccharobesus litoralis: C2869_10645
Help
Entry
C2869_10645 CDS
T05408
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cate
Saccharobesus litoralis
Pathway
cate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2869_10645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cate03019
]
C2869_10645
03009 Ribosome biogenesis [BR:
cate03009
]
C2869_10645
Enzymes [BR:
cate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2869_10645
Messenger RNA biogenesis [BR:
cate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2869_10645
Ribosome biogenesis [BR:
cate03009
]
Prokaryotic type
rRNA helicases
C2869_10645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AWB66862
UniProt:
A0A2S0VRR8
LinkDB
All DBs
Position
complement(2976385..2978256)
Genome browser
AA seq
623 aa
AA seq
DB search
MTDTTTSVRFDELGLADEILAAITEMGYVEPTPIQAKSIPALLEGHDVLGEAQTGTGKTA
AFGLPLLSRIDASVREPQMLVVCPTRELAIQVAEAITDFAKKIKGLFVATVYGGQSYTPQ
LKDLKRGPQIVVGTPGRMMDHIAKGRLKMDSLRACVLDEADEMLNMGFLEDIEWILEKLP
EDTQMAFFSATMPAPIRKITKQFLKDPVHVKIPVVKAAKPNITQKAWRVSRIGKTTGLER
IAETVDYDAMIVFVRTRNDTIVLAEHLVSKGFPAAALNGDMQQQDRERIVDQLKNGRISI
LIATDVVARGLDVPRISHVINYDLPHDSESYVHRIGRTGRAGREGEAILFATGREMRSLF
RLERATEGKIEQFNMPSAEELGASRIQRTQEQLQAVVEGKELEKFQEVVAKMAEETGLSV
EELATAMLFERQFKLPLFPKADPVERERNDRGGRDGRDGRREFGGRERDGRREGRGRGRD
GERGNRQRRDNADFDTYRFEVGRDHGVRPGDIVGAVANEINLDSSNIGQINLYGNHAHVD
LPKGMPSAQFDKLQTVFIRKRKISPQLVKGNKGGSDDDRGNRRSFERKSKKPQGNREFAV
NRERRFSDDGNRSDRSGRGRPSF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgactgatactactacttcggttcgctttgacgagcttggccttgctgacgaaatttta
gctgcaattactgaaatgggttacgttgaaccaaccccaatccaagctaaatccattcct
gcattattagaaggccatgacgttttaggtgaagcacaaacaggtacaggtaaaaccgct
gcattcggtttacctttgttatctcgtattgatgctagcgtacgcgaaccgcaaatgtta
gttgtctgcccaactcgtgagcttgctattcaggtagctgaagcaatcactgatttcgcg
aaaaagatcaaaggcttatttgtcgctactgtttatggtggccaatcttatacacctcaa
cttaaagacttaaagcgcggtccgcaaattgtcgtcggtacaccaggtcgtatgatggat
cacattgccaaagggcgtctaaaaatggacagcttacgtgcctgtgttctcgatgaagct
gacgaaatgctaaacatgggctttttagaagacattgagtggatccttgaaaagttacca
gaagatacccaaatggcgtttttctcggcaactatgcctgcacctattcgtaaaattact
aagcagttcttaaaagatcctgtacacgttaagatccctgtcgttaaagccgctaagcct
aacattacccaaaaagcttggcgtgttagccgtataggcaaaacaaccggtttagagcgc
attgccgaaacggttgattacgatgcgatgatcgttttcgtacgtacccgtaatgatact
attgtattagcggaacatttagtcagcaaaggcttccctgcagctgcacttaatggtgat
atgcaacaacaagatcgtgagcgtattgttgaccaattaaaaaatggtcgtatttcgatt
ttgattgccacagacgttgttgctcgtggtcttgacgttccgcgtatctcgcacgttatt
aactatgacttaccgcatgattcagagtcttacgtacaccgtattggtcgtactggccgt
gctggtcgtgaaggtgaagctatccttttcgcaacaggccgtgaaatgcgtagcttgttc
cgcttagagcgcgcaactgaaggtaaaattgaacaattcaatatgccatcagccgaagag
ctaggtgcatcacgcattcagcgcactcaagaacagttacaagcggttgttgaaggtaaa
gaattagagaaattccaagaagttgtcgctaaaatggctgaagaaactggtttatctgta
gaagagctagcaactgccatgttatttgaacgtcaattcaaattacctttattcccgaaa
gccgatccggttgaacgtgagcgtaatgaccgtggcggtcgtgatggacgcgatggccgt
cgtgaatttggcggtcgagagcgtgatggtcgccgcgaaggtcgtggtcgtggccgcgat
ggtgagcgtggcaaccgtcaacgtcgtgacaatgctgactttgatacctaccgctttgaa
gtgggacgtgaccacggtgtacgcccaggtgatatcgtcggtgctgttgccaacgaaatc
aaccttgattcgtcaaacattggtcaaattaacttatacggcaaccatgcccatgttgat
ttacctaaaggtatgccatctgcgcagtttgataagttacaaaccgtatttatccgcaag
cgtaagatctcacctcagttagtaaaaggtaacaaaggtggtagtgatgatgatcgtggt
aaccgtcgtagcttcgagcgtaaaagcaaaaagccacaaggcaaccgtgaatttgctgtg
aatcgcgagcgtcgtttcagcgatgacggtaaccgcagtgatcgcagcggtcgtggtcgt
ccttcgttctaa
DBGET
integrated database retrieval system
